FFCP PHASE1:Mm9::chrX:71167269..71167280,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:71167269..71167280,-
|short_description=p2@Naa10
|description=CAGE_peak_2_at_Naa10_5end
|association_with_transcript=2bp_to_ENSMUST00000033763,NM_001177965...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56292 | |EntrezGene=56292 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9QY36,Q3V4D5,Q540H0,A8W660,Q8BJV4 | |UniProt=Q9QY36,Q3V4D5,Q540H0,A8W660,Q8BJV4 | ||
|association_with_transcript=2bp_to_ENSMUST00000033763,NM_001177965,NM_019870,uc009tng.2,uc009tnh.2,uc009tni.2_5end | |||
|cluster_id=chrX:71167269..71167280,- | |||
|description=CAGE_peak_2_at_Naa10_5end | |||
|id=chrX:71167269..71167280,- | |||
|ontology_enrichment_celltype=CL:0000988!1.04e-08!32;CL:0002032!1.04e-08!32;CL:0000037!1.04e-08!32;CL:0000566!1.04e-08!32;CL:0000837!1.04e-08!32;CL:0000838!7.19e-08!12;CL:0000542!1.81e-07!13;CL:0000051!1.81e-07!13;CL:0000084!2.32e-07!11;CL:0000827!2.32e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.12e-11,32;CL:0002032,1.12e-11,32;CL:0000037,1.12e-11,32;CL:0000837,1.12e-11,32;CL:0000838,4.21e-11,12;CL:0000084,3.24e-10,11;CL:0000827,3.24e-10,11;CL:0000542,5.67e-10,13;CL:0000051,5.67e-10,13;CL:0002031,1.21e-08,25;CL:0000791,2.20e-08,9;CL:0000789,2.20e-08,9;CL:0002420,2.20e-08,9;CL:0002419,2.20e-08,9;CL:0000790,2.20e-08,9;CL:0000738,3.98e-08,17;CL:0002087,3.98e-08,17;CL:0000624,2.70e-07,8;CL:0002320,7.27e-07,46;CL:0000134,7.27e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.09e-11!48;UBERON:0002390!5.63e-11!45;UBERON:0003061!5.63e-11!45;UBERON:0004177!1.69e-10!29;UBERON:0002370!8.11e-09!23;UBERON:0000974!8.11e-09!23;UBERON:0004807!8.11e-09!23;UBERON:0005058!8.11e-09!23;UBERON:0003351!8.11e-09!23;UBERON:0009113!8.11e-09!23;UBERON:0003295!8.11e-09!23;UBERON:0009722!8.11e-09!23;UBERON:0005562!8.11e-09!23;UBERON:0007690!8.11e-09!23;UBERON:0006562!1.08e-08!24;UBERON:0001557!1.08e-08!24;UBERON:0001042!1.08e-08!24;UBERON:0008814!1.08e-08!24;UBERON:0009145!1.08e-08!24;UBERON:0000072!2.74e-08!27;UBERON:0000063!4.18e-08!35;UBERON:0003408!8.88e-08!24;UBERON:0002405!1.07e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.80e-17,29;UBERON:0005057,6.80e-17,29;UBERON:0002193,7.79e-17,48;UBERON:0002405,7.79e-17,48;UBERON:0002370,3.60e-16,23;UBERON:0000974,3.60e-16,23;UBERON:0004807,3.60e-16,23;UBERON:0005058,3.60e-16,23;UBERON:0003351,3.60e-16,23;UBERON:0009113,3.60e-16,23;UBERON:0003295,3.60e-16,23;UBERON:0009722,3.60e-16,23;UBERON:0005562,3.60e-16,23;UBERON:0007690,3.60e-16,23;UBERON:0002390,4.54e-16,45;UBERON:0003061,4.54e-16,45;UBERON:0006562,3.33e-15,24;UBERON:0003408,3.33e-15,24;UBERON:0001557,3.33e-15,24;UBERON:0001042,3.33e-15,24;UBERON:0008814,3.33e-15,24;UBERON:0009145,3.33e-15,24;UBERON:0000072,3.17e-14,27;UBERON:0000077,1.30e-12,35;UBERON:0000065,1.02e-08,41;UBERON:0001004,2.41e-08,42;UBERON:0007811,5.80e-08,36;UBERON:0002384,7.27e-07,46 | |||
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| ||
|short_description=p2@Naa10 | |||
}} | }} |
Latest revision as of 00:01, 2 October 2015
Short description: | p2@Naa10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Naa10_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENSMUST00000033763, NM_001177965, NM_019870, uc009tng.2, uc009tnh.2, uc009tni.2_5end |
EntrezGene: | Naa10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.12e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.12e-11 | 32 |
hematopoietic stem cell | 1.12e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.12e-11 | 32 |
lymphoid lineage restricted progenitor cell | 4.21e-11 | 12 |
T cell | 3.24e-10 | 11 |
pro-T cell | 3.24e-10 | 11 |
lymphocyte | 5.67e-10 | 13 |
common lymphoid progenitor | 5.67e-10 | 13 |
hematopoietic lineage restricted progenitor cell | 1.21e-08 | 25 |
mature alpha-beta T cell | 2.20e-08 | 9 |
alpha-beta T cell | 2.20e-08 | 9 |
immature T cell | 2.20e-08 | 9 |
mature T cell | 2.20e-08 | 9 |
immature alpha-beta T cell | 2.20e-08 | 9 |
leukocyte | 3.98e-08 | 17 |
nongranular leukocyte | 3.98e-08 | 17 |
CD4-positive, alpha-beta T cell | 2.70e-07 | 8 |
connective tissue cell | 7.27e-07 | 46 |
mesenchymal cell | 7.27e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 6.80e-17 | 29 |
immune organ | 6.80e-17 | 29 |
hemolymphoid system | 7.79e-17 | 48 |
immune system | 7.79e-17 | 48 |
thymus | 3.60e-16 | 23 |
neck | 3.60e-16 | 23 |
respiratory system epithelium | 3.60e-16 | 23 |
hemolymphoid system gland | 3.60e-16 | 23 |
pharyngeal epithelium | 3.60e-16 | 23 |
thymic region | 3.60e-16 | 23 |
pharyngeal gland | 3.60e-16 | 23 |
entire pharyngeal arch endoderm | 3.60e-16 | 23 |
thymus primordium | 3.60e-16 | 23 |
early pharyngeal endoderm | 3.60e-16 | 23 |
hematopoietic system | 4.54e-16 | 45 |
blood island | 4.54e-16 | 45 |
pharynx | 3.33e-15 | 24 |
gland of gut | 3.33e-15 | 24 |
upper respiratory tract | 3.33e-15 | 24 |
chordate pharynx | 3.33e-15 | 24 |
pharyngeal arch system | 3.33e-15 | 24 |
pharyngeal region of foregut | 3.33e-15 | 24 |
segment of respiratory tract | 3.17e-14 | 27 |
mixed endoderm/mesoderm-derived structure | 1.30e-12 | 35 |
respiratory tract | 1.02e-08 | 41 |
respiratory system | 2.41e-08 | 42 |
craniocervical region | 5.80e-08 | 36 |
connective tissue | 7.27e-07 | 46 |