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FFCP PHASE1:Mm9::chrX:98615545..98615564,-: Difference between revisions

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{{FFCP|EntrezGene=56364|HGNC=|MCL_coexpression_id=22|UniProt=Q32P02,B1AXS5,Q9JLM4|association_with_transcript=0bp_to_ENSMUST00000118092,NM_001177988,NM_019831,uc009txm.2,uc009txp.2_5end|description=CAGE_peak_3_at_Zmym3_5end|id=chrX:98615545..98615564,-|ontology_enrichment_celltype=CL:0000540!7.67e-12!33;CL:0000047!7.67e-12!33;CL:0000031!7.67e-12!33;CL:0000404!7.67e-12!33;CL:0000117!2.17e-10!23;CL:0000337!2.17e-10!23;CL:0000221!2.33e-07!44;CL:0000133!2.33e-07!44;CL:0000393!3.15e-07!39;CL:0000211!3.15e-07!39;CL:0002319!4.36e-07!43|ontology_enrichment_celltype_v019_2=CL:0000540,3.33e-15,33;CL:0000047,3.33e-15,33;CL:0000031,3.33e-15,33;CL:0000404,3.33e-15,33;CL:0000117,1.21e-14,23;CL:0000337,1.21e-14,23;CL:0000393,2.56e-11,39;CL:0000211,2.56e-11,39;CL:0000221,1.82e-10,44;CL:0000133,1.82e-10,44;CL:0002319,4.53e-10,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.06e-15!71;UBERON:0003075!6.06e-15!71;UBERON:0007284!6.06e-15!71;UBERON:0001017!9.25e-14!73;UBERON:0005743!9.25e-14!73;UBERON:0000153!3.55e-13!94;UBERON:0003056!4.97e-13!49;UBERON:0000073!6.20e-13!75;UBERON:0001016!6.20e-13!75;UBERON:0001049!3.11e-12!52;UBERON:0005068!3.11e-12!52;UBERON:0006241!3.11e-12!52;UBERON:0007135!3.11e-12!52;UBERON:0004121!5.42e-12!102;UBERON:0000924!5.42e-12!102;UBERON:0006601!5.42e-12!102;UBERON:0007811!4.55e-11!86;UBERON:0000033!6.74e-11!63;UBERON:0003080!1.41e-10!40;UBERON:0002780!2.52e-10!39;UBERON:0001890!2.52e-10!39;UBERON:0006240!2.52e-10!39;UBERON:0002020!5.08e-10!34;UBERON:0002616!4.91e-09!49;UBERON:0000955!7.93e-09!50;UBERON:0006238!7.93e-09!50;UBERON:0002791!3.21e-07!29;UBERON:0003528!3.21e-07!29;UBERON:0001893!3.21e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.38e-16,64;UBERON:0003075,1.38e-16,64;UBERON:0007284,1.38e-16,64;UBERON:0001017,2.01e-14,73;UBERON:0010371,2.75e-14,73;UBERON:0003056,1.26e-13,49;UBERON:0001016,1.29e-13,75;UBERON:0010314,3.83e-13,92;UBERON:0004121,8.68e-13,95;UBERON:0000924,8.68e-13,95;UBERON:0006601,8.68e-13,95;UBERON:0001049,1.55e-12,52;UBERON:0005068,1.55e-12,52;UBERON:0006241,1.55e-12,52;UBERON:0007135,1.55e-12,52;UBERON:0000073,2.15e-12,54;UBERON:0003080,1.54e-11,40;UBERON:0002780,3.49e-11,39;UBERON:0001890,3.49e-11,39;UBERON:0006240,3.49e-11,39;UBERON:0002020,1.27e-10,34;UBERON:0002616,1.93e-09,46;UBERON:0000955,4.91e-09,47;UBERON:0006238,4.91e-09,47;UBERON:0003528,5.31e-07,29;UBERON:0002791,5.31e-07,29;UBERON:0001893,5.31e-07,29|phase1_expression=1.44133962394315,0,0,0,0,0,0.233612640595526,0.129123323441576,0.281577444303333,0.234064526321993,0.34243593645101,0,0.171200729931206,0,0,0,0,0.157731082679119,0.274228867211478,0,0.340173160604279,1.98581902401771,1.04479915655574,0.159992422793407,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0.335565212115473,0,0,0,0,0,4.65327859977075,7.93486468908049,2.53532561402472,1.35537812827653,0.889294796111139,0,0,0,0,1.15265491596466,2.48855069540346,2.29510095163874,2.73422449756797,3.14216082844184,2.87129103237098,2.69479758272899,3.25874601462004,3.67687514644008,0,0.893811366596314,1.22885226604995,6.98997324970027,7.31901148819277,6.77187381723788,0,2.25105044012672,1.37518422999129,3.83017161115768,4.9830088279686,5.59198337475902,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,1.40843419776681,0,0,0,0.216491041011214,0.253359865475099,0,0,0.258937883647172,0.148442139064825,0.693941307064543,1.21786191324856,0.461230994512117,0.60289056221049,0.117588707135705,0.251333182659351,0,0,0,0.323533699894818,0.220841518460394,0,0,1.17112318804619,0.83778682725382,0,0.239630249011841,0.599902730993408,1.01656181658452,1.3481157546434,0,4.14659361972453,0.869121600961382,1.27857728665165,1.0389402227978,1.1356888414743,0.916554274652847,0.124406970610093,0.758168275301024,0.210441855886474,1.82168620147785,0.919608417733892,2.34080768746954,1.65775299619287,2.72145996605311,1.7935920839879,2.43624483855295,0.776110112217047,4.095791865724,3.59301552318857,2.81521798662318,1.97276159184817,1.94633074457919,0.696504333044333,0.411564272815887,0.59710280045548,0.702213187313235,0.772043721344145,1.42081749697796,0.621377317606506,1.87620847984877,1.2604344302271,1.18372367792605,1.18058539048442,1.07986979021165,1.16266972375204,2.14618721119695,0.700592054203017,0.493679549740441,0,0.162137619091711,0.292399974850665,0,0,0.630869845692382,3.19004298375782,0,0,1.49301775374664,1.62565670302307,1.80414445850931,1.00841762311671,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.795825888164603,0,0,0,0.199141273254367,1.13800740571849,1.48523066392647,4.50830942692322,1.22190796707189,0.193952487167626,1.19230893813542,0.505892296994058,0.442830443938806,0,0,0,0.333690211432188,0.393117990226406,0.449724224769707,0.811440485554012,0,0.25462585178142,0,0.324270453550071,0,0,0,0.312037673114561,0,0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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56364
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q32P02,B1AXS5,Q9JLM4
|association_with_transcript=0bp_to_ENSMUST00000118092,NM_001177988,NM_019831,uc009txm.2,uc009txp.2_5end
|cluster_id=chrX:98615545..98615564,-
|description=CAGE_peak_3_at_Zmym3_5end
|id=chrX:98615545..98615564,-
|ontology_enrichment_celltype=CL:0000540!7.67e-12!33;CL:0000047!7.67e-12!33;CL:0000031!7.67e-12!33;CL:0000404!7.67e-12!33;CL:0000117!2.17e-10!23;CL:0000337!2.17e-10!23;CL:0000221!2.33e-07!44;CL:0000133!2.33e-07!44;CL:0000393!3.15e-07!39;CL:0000211!3.15e-07!39;CL:0002319!4.36e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000540,3.33e-15,33;CL:0000047,3.33e-15,33;CL:0000031,3.33e-15,33;CL:0000404,3.33e-15,33;CL:0000117,1.21e-14,23;CL:0000337,1.21e-14,23;CL:0000393,2.56e-11,39;CL:0000211,2.56e-11,39;CL:0000221,1.82e-10,44;CL:0000133,1.82e-10,44;CL:0002319,4.53e-10,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.06e-15!71;UBERON:0003075!6.06e-15!71;UBERON:0007284!6.06e-15!71;UBERON:0001017!9.25e-14!73;UBERON:0005743!9.25e-14!73;UBERON:0000153!3.55e-13!94;UBERON:0003056!4.97e-13!49;UBERON:0000073!6.20e-13!75;UBERON:0001016!6.20e-13!75;UBERON:0001049!3.11e-12!52;UBERON:0005068!3.11e-12!52;UBERON:0006241!3.11e-12!52;UBERON:0007135!3.11e-12!52;UBERON:0004121!5.42e-12!102;UBERON:0000924!5.42e-12!102;UBERON:0006601!5.42e-12!102;UBERON:0007811!4.55e-11!86;UBERON:0000033!6.74e-11!63;UBERON:0003080!1.41e-10!40;UBERON:0002780!2.52e-10!39;UBERON:0001890!2.52e-10!39;UBERON:0006240!2.52e-10!39;UBERON:0002020!5.08e-10!34;UBERON:0002616!4.91e-09!49;UBERON:0000955!7.93e-09!50;UBERON:0006238!7.93e-09!50;UBERON:0002791!3.21e-07!29;UBERON:0003528!3.21e-07!29;UBERON:0001893!3.21e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.38e-16,64;UBERON:0003075,1.38e-16,64;UBERON:0007284,1.38e-16,64;UBERON:0001017,2.01e-14,73;UBERON:0010371,2.75e-14,73;UBERON:0003056,1.26e-13,49;UBERON:0001016,1.29e-13,75;UBERON:0010314,3.83e-13,92;UBERON:0004121,8.68e-13,95;UBERON:0000924,8.68e-13,95;UBERON:0006601,8.68e-13,95;UBERON:0001049,1.55e-12,52;UBERON:0005068,1.55e-12,52;UBERON:0006241,1.55e-12,52;UBERON:0007135,1.55e-12,52;UBERON:0000073,2.15e-12,54;UBERON:0003080,1.54e-11,40;UBERON:0002780,3.49e-11,39;UBERON:0001890,3.49e-11,39;UBERON:0006240,3.49e-11,39;UBERON:0002020,1.27e-10,34;UBERON:0002616,1.93e-09,46;UBERON:0000955,4.91e-09,47;UBERON:0006238,4.91e-09,47;UBERON:0003528,5.31e-07,29;UBERON:0002791,5.31e-07,29;UBERON:0001893,5.31e-07,29
|phase1_expression=1.44133962394315,0,0,0,0,0,0.233612640595526,0.129123323441576,0.281577444303333,0.234064526321993,0.34243593645101,0,0.171200729931206,0,0,0,0,0.157731082679119,0.274228867211478,0,0.340173160604279,1.98581902401771,1.04479915655574,0.159992422793407,0,0,0.430761996159075,0,0.190023419456374,0,0,0,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0.335565212115473,0,0,0,0,0,4.65327859977075,7.93486468908049,2.53532561402472,1.35537812827653,0.889294796111139,0,0,0,0,1.15265491596466,2.48855069540346,2.29510095163874,2.73422449756797,3.14216082844184,2.87129103237098,2.69479758272899,3.25874601462004,3.67687514644008,0,0.893811366596314,1.22885226604995,6.98997324970027,7.31901148819277,6.77187381723788,0,2.25105044012672,1.37518422999129,3.83017161115768,4.9830088279686,5.59198337475902,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,1.40843419776681,0,0,0,0.216491041011214,0.253359865475099,0,0,0.258937883647172,0.148442139064825,0.693941307064543,1.21786191324856,0.461230994512117,0.60289056221049,0.117588707135705,0.251333182659351,0,0,0,0.323533699894818,0.220841518460394,0,0,1.17112318804619,0.83778682725382,0,0.239630249011841,0.599902730993408,1.01656181658452,1.3481157546434,0,4.14659361972453,0.869121600961382,1.27857728665165,1.0389402227978,1.1356888414743,0.916554274652847,0.124406970610093,0.758168275301024,0.210441855886474,1.82168620147785,0.919608417733892,2.34080768746954,1.65775299619287,2.72145996605311,1.7935920839879,2.43624483855295,0.776110112217047,4.095791865724,3.59301552318857,2.81521798662318,1.97276159184817,1.94633074457919,0.696504333044333,0.411564272815887,0.59710280045548,0.702213187313235,0.772043721344145,1.42081749697796,0.621377317606506,1.87620847984877,1.2604344302271,1.18372367792605,1.18058539048442,1.07986979021165,1.16266972375204,2.14618721119695,0.700592054203017,0.493679549740441,0,0.162137619091711,0.292399974850665,0,0,0.630869845692382,3.19004298375782,0,0,1.49301775374664,1.62565670302307,1.80414445850931,1.00841762311671,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0.795825888164603,0,0,0,0.199141273254367,1.13800740571849,1.48523066392647,4.50830942692322,1.22190796707189,0.193952487167626,1.19230893813542,0.505892296994058,0.442830443938806,0,0,0,0.333690211432188,0.393117990226406,0.449724224769707,0.811440485554012,0,0.25462585178142,0,0.324270453550071,0,0,0,0.312037673114561,0,0,0,0,1.70542270593436,1.14075483509418,0.509235257325564,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0,0,0.144649058581512,0,0,0.491764273019036,0,0.642202359951168,0.820481806145422,0.163934945376675,0,1.57754109708128,1.95219372148319,2.58508077279359,0.238968797952552,0.891194696329576,0.566153061577665,1.21443210502468,1.16902343164525,1.18586333383957,0.321321316421807,0.141940085208269,1.6025904330053,1.14020871547503,0.164970122972535,0,0.971122544619926,0.302323556964751,0.754420319023592,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,1.02131881726136,1.26042765821917,1.68166288917581,1.92903331528433,1.41872186913819,2.85390108163313,2.96188237083818,1.522324745573,0,0,0.220528398054962,0,0.484393280087717,0.542816324353403,0.358117032009409,0.164140899745061,0,0.927126510052548,0.170870880797853,0.619160603889667,0.740778109478847,0.941842285023455,0.136694227721025,0.457556346413045,1.35982743995084,1.39951452323658,0.414599921413271,0,1.58167996790568,1.62655573701479,1.40406943068342,0.418176592028937,0.655087691238533,0.674321731924103,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,1.79419855252775,2.31641886639937,0.583353565032143,1.29159823477731,0.844780627453891,0.704143431874524,1.43224823328345,2.20204623293993,0.483168241652012,0,0.316011120628178,1.41907650703115,1.33524244314275,1.55904987573354,1.25318686967237,1.39076948346885,1.20195449519969,1.9199638532695,1.71642964911851,1.82896335972,1.41156659191577,1.16949456887703,1.53938946624527,1.8700304349051,0.226730383615211,0.221985953374065,0.0897138566094757,0,0,0,0.36630324853453,0.428736758158132,0,3.3885110557024,0.460325236507177,2.29158205375759,0.68741272937475,0.685082519770642,1.5107877947794,0.675022500231806,1.80128481289688,0.453142408984205,1.55328093525546,1.3492355185943,3.59122386060928,2.73173769206615,1.21553358534147,0.838452650511929,0.735374033800057,0.44449345560323,0.206035057238894,1.60459604795908,0.758091635291392,0.760437899670719,0.565879024158229,0.936415074698824,0.576226371643824,1.37845125493472,1.90517476513229,1.0429589335037,1.35036454324594,0.824171801606613,0.883193520806384,1.37147700954166,0.70990322463735,0.238436189947321,0.290692833264657,0.846984423737976,0.930760686808441,0.365855945745545,0.263069711437843,0.814824683075171,0,0.949080144993393,0.886540341380071,0.409231043169689,0.929621047115796,0.771626443924566,1.99848462350357,0.467863216890817,0.859484216193193,0.57386499620653,0.441182838239031,0.231867835620421
|short_description=p3@Zmym3
}}

Latest revision as of 00:59, 2 October 2015

Short description:p3@Zmym3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Zmym3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 0bp_to_ENSMUST00000118092, NM_001177988, NM_019831, uc009txm.2, uc009txp.2_5end
EntrezGene:Zmym3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Zmym3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.33e-1533
neuronal stem cell3.33e-1533
neuroblast3.33e-1533
electrically signaling cell3.33e-1533
CNS neuron (sensu Vertebrata)1.21e-1423
neuroblast (sensu Vertebrata)1.21e-1423
electrically responsive cell2.56e-1139
electrically active cell2.56e-1139
ectodermal cell1.82e-1044
neurectodermal cell1.82e-1044
neural cell4.53e-1043

Uber anatomy
Ontology termp-valuen
neurectoderm1.38e-1664
neural plate1.38e-1664
presumptive neural plate1.38e-1664
central nervous system2.01e-1473
ecto-epithelium2.75e-1473
pre-chordal neural plate1.26e-1349
nervous system1.29e-1375
structure with developmental contribution from neural crest3.83e-1392
ectoderm-derived structure8.68e-1395
ectoderm8.68e-1395
presumptive ectoderm8.68e-1395
neural tube1.55e-1252
neural rod1.55e-1252
future spinal cord1.55e-1252
neural keel1.55e-1252
regional part of nervous system2.15e-1254
anterior neural tube1.54e-1140
regional part of forebrain3.49e-1139
forebrain3.49e-1139
future forebrain3.49e-1139
gray matter1.27e-1034
regional part of brain1.93e-0946
brain4.91e-0947
future brain4.91e-0947
brain grey matter5.31e-0729
regional part of telencephalon5.31e-0729
telencephalon5.31e-0729
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