FFCP PHASE1:Mm9::chrX:99446117..99446136,-: Difference between revisions
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{{FFCP|EntrezGene=12705|HGNC=|UniProt=F6R7Z3|association_with_transcript=-3bp_to_ENSMUST00000130589_5end|description=CAGE_peak_5_at_Cited1_5end|id=chrX:99446117..99446136,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!5.57e-09!18;UBERON:0000948!5.57e-09!18;UBERON:0005498!5.57e-09!18;UBERON:0004140!5.57e-09!18;UBERON:0009881!5.57e-09!18;UBERON:0004141!5.57e-09!18;UBERON:0003084!5.57e-09!18;UBERON:0007005!5.57e-09!18;UBERON:0004139!5.57e-09!18;UBERON:0004291!5.57e-09!18;UBERON:0003135!6.90e-09!15;UBERON:0000473!4.31e-08!14;UBERON:0003101!5.30e-08!16;UBERON:0000079!5.30e-08!16;UBERON:0000991!5.73e-08!18;UBERON:0005564!5.73e-08!18;UBERON:0003133!1.56e-07!24;UBERON:0004176!2.13e-07!17;UBERON:0009196!2.13e-07!17;UBERON:0009117!2.13e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.30e-19,15;UBERON:0003101,2.86e-18,16;UBERON:0000079,2.86e-18,16;UBERON:0000473,4.62e-17,14;UBERON:0007100,2.18e-16,18;UBERON:0000948,2.18e-16,18;UBERON:0005498,2.18e-16,18;UBERON:0004140,2.18e-16,18;UBERON:0009881,2.18e-16,18;UBERON:0004141,2.18e-16,18;UBERON:0003084,2.18e-16,18;UBERON:0007005,2.18e-16,18;UBERON:0004139,2.18e-16,18;UBERON:0004291,2.18e-16,18;UBERON:0004176,8.88e-14,17;UBERON:0009196,8.88e-14,17;UBERON:0009117,8.88e-14,17;UBERON:0000991,6.31e-13,18;UBERON:0005564,6.31e-13,18;UBERON:0004535,2.03e-12,23;UBERON:0001009,2.03e-12,23;UBERON:0003133,1.44e-11,24;UBERON:0005156,1.55e-10,26;UBERON:0000990,1.55e-10,26;UBERON:0003103,5.99e-10,43;UBERON:0000926,1.60e-08,120;UBERON:0004120,1.60e-08,120;UBERON:0006603,1.60e-08,120;UBERON:0004872,4.27e-08,33|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,3.81018404075779,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0.55994568650145,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.898800331555214,1.92109152660777,0,0,0,0,0.220868540951614,0,0,0,0,0.383062014255563,0,0.263772575460388,0,0,0.558365998002762,0,0.45839474333043,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.811206315338788,0,0.248813941220186,3.0326731012041,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0.2562274405697,0.281105173679186,0,0,0.378212160335639,0.351902248327898,0,0,0,0.61734640922383,0.59710280045548,0,0,0,1.24275463521301,4.45599513964083,2.52086886045421,3.55117103377815,4.13204886669548,4.9365476123961,3.95307706075693,1.60964040839772,3.15266424391358,3.12663714835613,0.492502392237286,0.56748166682099,0.438599962275997,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,1.32767530667157,0.342745537829186,1.1270773567308,0.407302655690628,0.581857461502877,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.449724224769707,0.405720242777006,0.964708639009667,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0.704070744865506,0.502518772325447,0,0.390267295715598,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0.35163505977661,0,0,0.631016438832513,0.390438744296638,0.430846795465598,2.15071918157297,0.668396022247182,0.566153061577665,2.42886421004937,0.292255857911312,1.58115111178609,0,0.141940085208269,0.178065603667255,0,0,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,2.81846469342095,0.598066184175915,0.66183396182839,2.33341426012857,2.32487682259916,2.19642963138012,2.93393096614385,3.6457227756306,6.50127935439407,4.34851417486811,1.44015003128933,0,0.202725215290164,0,0,0,0.39736270956253,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.347652977834566,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0,0,0.561142271657738,0.237270036248348,0.394017929502254,0,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p5@Cited1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12705 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=F6R7Z3 | |||
|association_with_transcript=-3bp_to_ENSMUST00000130589_5end | |||
|cluster_id=chrX:99446117..99446136,- | |||
|description=CAGE_peak_5_at_Cited1_5end | |||
|id=chrX:99446117..99446136,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.57e-09!18;UBERON:0000948!5.57e-09!18;UBERON:0005498!5.57e-09!18;UBERON:0004140!5.57e-09!18;UBERON:0009881!5.57e-09!18;UBERON:0004141!5.57e-09!18;UBERON:0003084!5.57e-09!18;UBERON:0007005!5.57e-09!18;UBERON:0004139!5.57e-09!18;UBERON:0004291!5.57e-09!18;UBERON:0003135!6.90e-09!15;UBERON:0000473!4.31e-08!14;UBERON:0003101!5.30e-08!16;UBERON:0000079!5.30e-08!16;UBERON:0000991!5.73e-08!18;UBERON:0005564!5.73e-08!18;UBERON:0003133!1.56e-07!24;UBERON:0004176!2.13e-07!17;UBERON:0009196!2.13e-07!17;UBERON:0009117!2.13e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.30e-19,15;UBERON:0003101,2.86e-18,16;UBERON:0000079,2.86e-18,16;UBERON:0000473,4.62e-17,14;UBERON:0007100,2.18e-16,18;UBERON:0000948,2.18e-16,18;UBERON:0005498,2.18e-16,18;UBERON:0004140,2.18e-16,18;UBERON:0009881,2.18e-16,18;UBERON:0004141,2.18e-16,18;UBERON:0003084,2.18e-16,18;UBERON:0007005,2.18e-16,18;UBERON:0004139,2.18e-16,18;UBERON:0004291,2.18e-16,18;UBERON:0004176,8.88e-14,17;UBERON:0009196,8.88e-14,17;UBERON:0009117,8.88e-14,17;UBERON:0000991,6.31e-13,18;UBERON:0005564,6.31e-13,18;UBERON:0004535,2.03e-12,23;UBERON:0001009,2.03e-12,23;UBERON:0003133,1.44e-11,24;UBERON:0005156,1.55e-10,26;UBERON:0000990,1.55e-10,26;UBERON:0003103,5.99e-10,43;UBERON:0000926,1.60e-08,120;UBERON:0004120,1.60e-08,120;UBERON:0006603,1.60e-08,120;UBERON:0004872,4.27e-08,33 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,3.81018404075779,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0.55994568650145,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.898800331555214,1.92109152660777,0,0,0,0,0.220868540951614,0,0,0,0,0.383062014255563,0,0.263772575460388,0,0,0.558365998002762,0,0.45839474333043,0,0,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0.304465478312141,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.811206315338788,0,0.248813941220186,3.0326731012041,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0.2562274405697,0.281105173679186,0,0,0.378212160335639,0.351902248327898,0,0,0,0.61734640922383,0.59710280045548,0,0,0,1.24275463521301,4.45599513964083,2.52086886045421,3.55117103377815,4.13204886669548,4.9365476123961,3.95307706075693,1.60964040839772,3.15266424391358,3.12663714835613,0.492502392237286,0.56748166682099,0.438599962275997,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,1.32767530667157,0.342745537829186,1.1270773567308,0.407302655690628,0.581857461502877,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.449724224769707,0.405720242777006,0.964708639009667,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0.704070744865506,0.502518772325447,0,0.390267295715598,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0.35163505977661,0,0,0.631016438832513,0.390438744296638,0.430846795465598,2.15071918157297,0.668396022247182,0.566153061577665,2.42886421004937,0.292255857911312,1.58115111178609,0,0.141940085208269,0.178065603667255,0,0,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.63549621259146,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,2.81846469342095,0.598066184175915,0.66183396182839,2.33341426012857,2.32487682259916,2.19642963138012,2.93393096614385,3.6457227756306,6.50127935439407,4.34851417486811,1.44015003128933,0,0.202725215290164,0,0,0,0.39736270956253,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0.341467211508268,0,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.347652977834566,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0,0,0.561142271657738,0.237270036248348,0.394017929502254,0,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p5@Cited1 | |||
}} |
Latest revision as of 01:01, 2 October 2015
Short description: | p5@Cited1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cited1_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENSMUST00000130589_5end |
EntrezGene: | Cited1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.30e-19 | 15 |
male organism | 2.86e-18 | 16 |
male reproductive system | 2.86e-18 | 16 |
testis | 4.62e-17 | 14 |
primary circulatory organ | 2.18e-16 | 18 |
heart | 2.18e-16 | 18 |
primitive heart tube | 2.18e-16 | 18 |
primary heart field | 2.18e-16 | 18 |
anterior lateral plate mesoderm | 2.18e-16 | 18 |
heart tube | 2.18e-16 | 18 |
heart primordium | 2.18e-16 | 18 |
cardiac mesoderm | 2.18e-16 | 18 |
cardiogenic plate | 2.18e-16 | 18 |
heart rudiment | 2.18e-16 | 18 |
external genitalia | 8.88e-14 | 17 |
indifferent external genitalia | 8.88e-14 | 17 |
indifferent gonad | 8.88e-14 | 17 |
gonad | 6.31e-13 | 18 |
gonad primordium | 6.31e-13 | 18 |
cardiovascular system | 2.03e-12 | 23 |
circulatory system | 2.03e-12 | 23 |
reproductive organ | 1.44e-11 | 24 |
reproductive structure | 1.55e-10 | 26 |
reproductive system | 1.55e-10 | 26 |
compound organ | 5.99e-10 | 43 |
mesoderm | 1.60e-08 | 120 |
mesoderm-derived structure | 1.60e-08 | 120 |
presumptive mesoderm | 1.60e-08 | 120 |
splanchnic layer of lateral plate mesoderm | 4.27e-08 | 33 |