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FFCP PHASE1:Mm9::chr9:110019834..110019857,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72831
|EntrezGene=72831
|HGNC=
|HGNC=
|MCL_coexpression_id=482
|TSSclassifier=NA
|UniProt=Q99PU8
|UniProt=Q99PU8
|association_with_transcript=-27bp_to_ENSMUST00000136969,uc009rtj.1_5end
|association_with_transcript=-27bp_to_ENSMUST00000136969,uc009rtj.1_5end
|cluster_id=chr9:110019834..110019857,-
|description=CAGE_peak_3_at_Dhx30_5end
|description=CAGE_peak_3_at_Dhx30_5end
|id=chr9:110019834..110019857,-
|id=chr9:110019834..110019857,-
|ontology_enrichment_celltype=CL:0000117!9.77e-10!23;CL:0000337!9.77e-10!23;CL:0000540!2.09e-08!33;CL:0000047!2.09e-08!33;CL:0000031!2.09e-08!33;CL:0000404!2.09e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,9.86e-12,23;CL:0000337,9.86e-12,23;CL:0000540,9.29e-08,33;CL:0000047,9.29e-08,33;CL:0000031,9.29e-08,33;CL:0000404,9.29e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!5.10e-20!94;UBERON:0007811!1.89e-16!86;UBERON:0003056!2.23e-13!49;UBERON:0001017!2.58e-13!73;UBERON:0005743!2.58e-13!73;UBERON:0000033!2.60e-13!63;UBERON:0001049!7.12e-13!52;UBERON:0005068!7.12e-13!52;UBERON:0006241!7.12e-13!52;UBERON:0007135!7.12e-13!52;UBERON:0000073!1.97e-12!75;UBERON:0001016!1.97e-12!75;UBERON:0002346!2.42e-12!71;UBERON:0003075!2.42e-12!71;UBERON:0007284!2.42e-12!71;UBERON:0003080!9.26e-12!40;UBERON:0002780!1.94e-11!39;UBERON:0001890!1.94e-11!39;UBERON:0006240!1.94e-11!39;UBERON:0000955!2.45e-11!50;UBERON:0006238!2.45e-11!50;UBERON:0002616!3.73e-11!49;UBERON:0004121!1.52e-10!102;UBERON:0000924!1.52e-10!102;UBERON:0006601!1.52e-10!102;UBERON:0002020!2.65e-10!34;UBERON:0002791!2.08e-08!29;UBERON:0003528!2.08e-08!29;UBERON:0001893!2.08e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.92e-13,64;UBERON:0003075,5.92e-13,64;UBERON:0007284,5.92e-13,64;UBERON:0003056,2.35e-12,49;UBERON:0000073,2.91e-12,54;UBERON:0001049,4.31e-12,52;UBERON:0005068,4.31e-12,52;UBERON:0006241,4.31e-12,52;UBERON:0007135,4.31e-12,52;UBERON:0003080,1.26e-11,40;UBERON:0002780,4.38e-11,39;UBERON:0001890,4.38e-11,39;UBERON:0006240,4.38e-11,39;UBERON:0010371,5.47e-11,73;UBERON:0001017,1.77e-10,73;UBERON:0002616,4.22e-10,46;UBERON:0000153,5.33e-10,43;UBERON:0001016,5.89e-10,75;UBERON:0000955,9.64e-10,47;UBERON:0006238,9.64e-10,47;UBERON:0004121,2.85e-09,95;UBERON:0000924,2.85e-09,95;UBERON:0006601,2.85e-09,95;UBERON:0002020,1.19e-08,34;UBERON:0002102,6.50e-07,7;UBERON:0004710,6.50e-07,7;UBERON:0005419,6.50e-07,7;UBERON:0005417,6.50e-07,7;UBERON:0005729,6.50e-07,7;UBERON:0010314,7.09e-07,92
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.387369970324729,0,0.936258105287974,0.513653904676515,0.159544317990673,0.342401459862411,0.262261207256992,0,0,0,0.315462165358238,0.137114433605739,0,0.510259740906419,0.496454756004426,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0,0,1.41621522601718,5.28990979272033,3.1691570175309,0,0,0,0,0,0.299600110518405,0.384218305321555,1.65903379693564,2.29510095163874,0.630974884054146,1.14260393761521,1.10434270475807,2.81728838194394,3.54628242767475,1.83843757322004,1.10115880999389,0.383062014255563,0.307213066512487,3.95658863190582,4.20843160571084,2.6045668527838,0.279182999001381,0.56276261003168,0.763991238884051,0.589257170947335,1.85083185038834,2.42319279572891,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,1.12674735821344,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0,1.86391761218122,0,0.41889341362691,0,0.11981512450592,0,0.254140454146129,1.04853447583376,0,8.54449594367478,0.695297280769106,0.511430914660661,1.24672826735736,1.1356888414743,0.509196819251581,0.124406970610093,0,0.210441855886474,1.30120442962704,0.459804208866946,1.44049703844279,1.35634336052144,1.56483948048054,0.384341160854549,0.468508622798644,0.517406741478031,1.94011193639558,2.64748512234947,2.46331573829528,1.97276159184817,1.94633074457919,1.39300866608867,0.61734640922383,1.19420560091096,0,0,0.284163499395593,0.621377317606506,0.938104239924385,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,1.13195073617213,0.330418782983798,0,0.853153002140936,0.464473343720877,0.902072229254653,0.201683524623343,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0.685491075658373,2.25415471346161,0.814605311381257,0.193952487167626,0.631222379012867,0.442655759869801,0.147610147979602,0,0.370191491765402,0,0.667380422864376,0.393117990226406,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.32643988239339,0.162964976442026,0.169745085775188,0.469380496577004,0,0,0.390267295715598,0.472905432318573,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,1.05490517932983,0,0,0,0.390438744296638,1.29254038639679,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0,0.890328018336276,0.325773918707152,1.15479086080775,0,0.728341908464944,0.302323556964751,0.565815239267694,0,0,0,0,0,0,0,0,0.680879211507576,1.62054984628179,2.8458910432206,1.28602221018955,1.95074257006501,1.24858172321449,1.31639216481697,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0.339956859987711,0.139951452323658,0.414599921413271,0,1.89801596148681,0.406638934253697,0.432021363287205,0,0,0,0.0826534557253359,0,0,0.621339313086926,1.12738587736838,1.19613236835183,1.32366792365678,0.972255941720238,0.387479470433193,0.675824501963113,0.469428954583016,0.651021924219751,3.14578033277133,1.20792060413003,1.44015003128933,2.21207784439725,0,1.02710957164827,1.16928740680016,1.79026695667481,3.77494574084403,0.600977247599844,1.62458479892035,2.3222283488074,1.67654974641,2.11734988787365,1.8516997340553,1.92423683280659,1.75315353272353,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,1.6942555278512,0.460325236507177,2.86447756719698,0.68741272937475,2.05524755931193,0.755393897389701,0.675022500231806,0.45032120322422,1.35942722695261,0.51776031175182,0.726511433089237,2.39414924040619,1.19513524027894,0.729320151204882,0.838452650511929,0.551530525350042,0.888986911206461,1.23621034343337,0.962757628775446,0,0,0.377252682772152,0.561849044819294,0.448176066834085,1.09127391015665,0.476293691283074,0.695305955669133,1.15745532278223,0.412085900803307,0.883193520806384,1.37147700954166,0.70990322463735,0.476872379894642,0.872078499793971,0.564656282491984,0.676916863133412,1.09756783723664,0.526139422875686,0.407412341537585,0,1.06771516311757,0.394017929502254,0.409231043169689,0.464810523557898,0.578719832943424,0.999242311751784,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.387369970324729,0,0.936258105287974,0.513653904676515,0.159544317990673,0.342401459862411,0.262261207256992,0,0,0,0.315462165358238,0.137114433605739,0,0.510259740906419,0.496454756004426,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0,0,0,0,1.41621522601718,5.28990979272033,3.1691570175309,0,0,0,0,0,0.299600110518405,0.384218305321555,1.65903379693564,2.29510095163874,0.630974884054146,1.14260393761521,1.10434270475807,2.81728838194394,3.54628242767475,1.83843757322004,1.10115880999389,0.383062014255563,0.307213066512487,3.95658863190582,4.20843160571084,2.6045668527838,0.279182999001381,0.56276261003168,0.763991238884051,0.589257170947335,1.85083185038834,2.42319279572891,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,1.12674735821344,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0,1.86391761218122,0,0.41889341362691,0,0.11981512450592,0,0.254140454146129,1.04853447583376,0,8.54449594367478,0.695297280769106,0.511430914660661,1.24672826735736,1.1356888414743,0.509196819251581,0.124406970610093,0,0.210441855886474,1.30120442962704,0.459804208866946,1.44049703844279,1.35634336052144,1.56483948048054,0.384341160854549,0.468508622798644,0.517406741478031,1.94011193639558,2.64748512234947,2.46331573829528,1.97276159184817,1.94633074457919,1.39300866608867,0.61734640922383,1.19420560091096,0,0,0.284163499395593,0.621377317606506,0.938104239924385,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,1.13195073617213,0.330418782983798,0,0.853153002140936,0.464473343720877,0.902072229254653,0.201683524623343,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0.685491075658373,2.25415471346161,0.814605311381257,0.193952487167626,0.631222379012867,0.442655759869801,0.147610147979602,0,0.370191491765402,0,0.667380422864376,0.393117990226406,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.32643988239339,0.162964976442026,0.169745085775188,0.469380496577004,0,0,0.390267295715598,0.472905432318573,0,0,0.163863314715738,0,0,0,0,0,0,0.642202359951168,1.05490517932983,0,0,0,0.390438744296638,1.29254038639679,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0,0.890328018336276,0.325773918707152,1.15479086080775,0,0.728341908464944,0.302323556964751,0.565815239267694,0,0,0,0,0,0,0,0,0.680879211507576,1.62054984628179,2.8458910432206,1.28602221018955,1.95074257006501,1.24858172321449,1.31639216481697,0,0,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0.339956859987711,0.139951452323658,0.414599921413271,0,1.89801596148681,0.406638934253697,0.432021363287205,0,0,0,0.0826534557253359,0,0,0.621339313086926,1.12738587736838,1.19613236835183,1.32366792365678,0.972255941720238,0.387479470433193,0.675824501963113,0.469428954583016,0.651021924219751,3.14578033277133,1.20792060413003,1.44015003128933,2.21207784439725,0,1.02710957164827,1.16928740680016,1.79026695667481,3.77494574084403,0.600977247599844,1.62458479892035,2.3222283488074,1.67654974641,2.11734988787365,1.8516997340553,1.92423683280659,1.75315353272353,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0,1.6942555278512,0.460325236507177,2.86447756719698,0.68741272937475,2.05524755931193,0.755393897389701,0.675022500231806,0.45032120322422,1.35942722695261,0.51776031175182,0.726511433089237,2.39414924040619,1.19513524027894,0.729320151204882,0.838452650511929,0.551530525350042,0.888986911206461,1.23621034343337,0.962757628775446,0,0,0.377252682772152,0.561849044819294,0.448176066834085,1.09127391015665,0.476293691283074,0.695305955669133,1.15745532278223,0.412085900803307,0.883193520806384,1.37147700954166,0.70990322463735,0.476872379894642,0.872078499793971,0.564656282491984,0.676916863133412,1.09756783723664,0.526139422875686,0.407412341537585,0,1.06771516311757,0.394017929502254,0.409231043169689,0.464810523557898,0.578719832943424,0.999242311751784,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0
|short_description=p3@Dhx30
|short_description=p3@Dhx30
}}
}}

Latest revision as of 05:18, 26 September 2015

Short description:p3@Dhx30
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Dhx30_5end
Coexpression cluster:MCL_coexpression_mm9:482
Association with transcript: -27bp_to_ENSMUST00000136969, uc009rtj.1_5end
EntrezGene:Dhx30
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Dhx30

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F18.54
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.92
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.86e-1223
neuroblast (sensu Vertebrata)9.86e-1223
neuron9.29e-0833
neuronal stem cell9.29e-0833
neuroblast9.29e-0833
electrically signaling cell9.29e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm5.92e-1364
neural plate5.92e-1364
presumptive neural plate5.92e-1364
pre-chordal neural plate2.35e-1249
regional part of nervous system2.91e-1254
neural tube4.31e-1252
neural rod4.31e-1252
future spinal cord4.31e-1252
neural keel4.31e-1252
anterior neural tube1.26e-1140
regional part of forebrain4.38e-1139
forebrain4.38e-1139
future forebrain4.38e-1139
ecto-epithelium5.47e-1173
central nervous system1.77e-1073
regional part of brain4.22e-1046
anterior region of body5.33e-1043
nervous system5.89e-1075
brain9.64e-1047
future brain9.64e-1047
ectoderm-derived structure2.85e-0995
ectoderm2.85e-0995
presumptive ectoderm2.85e-0995
gray matter1.19e-0834
forelimb6.50e-077
pectoral appendage6.50e-077
pectoral appendage bud6.50e-077
forelimb bud6.50e-077
forelimb/pectoral fin field6.50e-077
structure with developmental contribution from neural crest7.09e-0792
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