FFCP PHASE1:Mm9::chr18:34476135..34476174,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:34476135..34476174,+ | |||
|description=CAGE_peak_at_chr18:34476135..34476174,+ | |description=CAGE_peak_at_chr18:34476135..34476174,+ | ||
|id=chr18:34476135..34476174,+ | |id=chr18:34476135..34476174,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.10e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.31e-07!10;UBERON:0000411!2.31e-07!10;UBERON:0001950!2.31e-07!10;UBERON:0002346!6.10e-07!71;UBERON:0003075!6.10e-07!71;UBERON:0007284!6.10e-07!71;UBERON:0004121!8.84e-07!102;UBERON:0000924!8.84e-07!102;UBERON:0006601!8.84e-07!102 | |ontology_enrichment_uberon=UBERON:0002021!2.31e-07!10;UBERON:0000411!2.31e-07!10;UBERON:0001950!2.31e-07!10;UBERON:0002346!6.10e-07!71;UBERON:0003075!6.10e-07!71;UBERON:0007284!6.10e-07!71;UBERON:0004121!8.84e-07!102;UBERON:0000924!8.84e-07!102;UBERON:0006601!8.84e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.34e-15,34;UBERON:0002021,3.03e-14,10;UBERON:0000411,3.03e-14,10;UBERON:0001950,3.03e-14,10;UBERON:0002619,1.02e-11,17;UBERON:0003528,1.58e-11,29;UBERON:0002791,1.58e-11,29;UBERON:0001893,1.58e-11,29;UBERON:0000073,2.99e-11,54;UBERON:0001049,1.36e-09,52;UBERON:0005068,1.36e-09,52;UBERON:0006241,1.36e-09,52;UBERON:0007135,1.36e-09,52;UBERON:0001017,1.49e-09,73;UBERON:0000956,2.08e-09,21;UBERON:0001869,2.08e-09,21;UBERON:0000203,2.08e-09,21;UBERON:0001016,2.97e-09,75;UBERON:0002346,3.63e-09,64;UBERON:0003075,3.63e-09,64;UBERON:0007284,3.63e-09,64;UBERON:0002257,1.10e-08,3;UBERON:0000955,1.45e-08,47;UBERON:0006238,1.45e-08,47;UBERON:0002780,2.43e-08,39;UBERON:0001890,2.43e-08,39;UBERON:0006240,2.43e-08,39;UBERON:0004121,2.84e-08,95;UBERON:0000924,2.84e-08,95;UBERON:0006601,2.84e-08,95;UBERON:0003056,4.03e-08,49;UBERON:0003080,4.13e-08,40;UBERON:0010371,7.55e-08,73;UBERON:0002616,6.23e-07,46 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.420649922702764,0.856952953211411,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0.893811366596314,2.61131106535614,0,0.457438218012048,0,0,0,0.15279824777681,4.41942878210502,2.13557521198654,0.559198337475902,0.37863096666592,0.226714680320357,0,0,0,0.539703191637817,0,0.448026887097336,0.140444420131752,0,0,0.35333957451034,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0.823120949949934,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0.149790639404823,1.83000241127451,1.00523481690292,0.695297280769106,0.511430914660661,0.41557608911912,0.324482526135515,0.101839363850316,0,0.252722758433675,0.420883711772948,0.390361328888111,0,0.180062129805349,0.60281927134286,0.884474488967262,1.0249097622788,0.562210347358373,0.776110112217047,0.215567992932842,0.378212160335639,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0.621377317606506,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0.630869845692382,1.9551876352064,0.330418782983798,0,0,0.232236671860439,0.257734922644187,0.403367049246685,0,0,0.474529061544512,0.164698954724011,0,0,0.779856348476481,0.898819408654221,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.814605311381257,0.387904974335251,0.280543279561274,0.379419222745544,0.442830443938806,0.31399745568275,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0.554259570499814,0,0.488894929326078,0,0.469380496577004,0.335012514883631,0.238043640886014,0.390267295715598,0.630540576424764,1.10732344824387,0.637819074629948,0.327726629431476,0.690739927463582,0.144649058581512,1.50791283939272,0,0.491764273019036,0,0.481651769963376,0.468846746368813,0.163934945376675,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.584511715822624,0,1.60660658210904,0.425820255624806,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.23467170806371,0,0,0.32977250588296,0.322928853391811,0.180938774784468,0.119372344003136,0.656563598980245,0.874442509889552,0.927126510052548,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.648032044930808,0.209088296014469,0.436725127492355,0.134864346384821,0,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.675824501963113,0.469428954583016,0.2604087696879,0.209718688851422,0.483168241652012,0,0,0,0.410843828659309,0,0,0.39736270956253,0.240390899039938,0.443068581523732,0.201932899896295,0.304827226619999,0.504130925684203,0.584747284438515,0.192423683280659,0,0,0,0.179427713218951,0,0,0,0.36630324853453,0,0.501572104035363,3.3885110557024,3.22227665555024,1.14579102687879,4.98374228796694,0.685082519770642,0.755393897389701,2.02506750069542,0.45032120322422,0.906284817968409,0.51776031175182,0.207574695168353,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.222246727801615,0.824140228955577,0,0.505394423527595,0.50695859978048,0.188626341386076,0,0.448176066834085,0.17230640686684,0.476293691283074,0.231768651889711,0.77163688185482,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.715308569841963,0.436039249896986,0.376437521661322,0.169229215783353,0.914639864363863,0.526139422875686,0.407412341537585,0,0.355905054372522,0.591026894253381,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0,0 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| ||
|short_description=p@chr18:34476135..34476174,+ | |short_description=p@chr18:34476135..34476174,+ | ||
}} | }} |
Latest revision as of 15:59, 5 August 2015
Short description: | p@chr18:34476135..34476174, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:34476135..34476174, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.10e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.34e-15 | 34 |
occipital lobe | 3.03e-14 | 10 |
visual cortex | 3.03e-14 | 10 |
neocortex | 3.03e-14 | 10 |
regional part of cerebral cortex | 1.02e-11 | 17 |
brain grey matter | 1.58e-11 | 29 |
regional part of telencephalon | 1.58e-11 | 29 |
telencephalon | 1.58e-11 | 29 |
regional part of nervous system | 2.99e-11 | 54 |
neural tube | 1.36e-09 | 52 |
neural rod | 1.36e-09 | 52 |
future spinal cord | 1.36e-09 | 52 |
neural keel | 1.36e-09 | 52 |
central nervous system | 1.49e-09 | 73 |
cerebral cortex | 2.08e-09 | 21 |
cerebral hemisphere | 2.08e-09 | 21 |
pallium | 2.08e-09 | 21 |
nervous system | 2.97e-09 | 75 |
neurectoderm | 3.63e-09 | 64 |
neural plate | 3.63e-09 | 64 |
presumptive neural plate | 3.63e-09 | 64 |
ventral horn of spinal cord | 1.10e-08 | 3 |
brain | 1.45e-08 | 47 |
future brain | 1.45e-08 | 47 |
regional part of forebrain | 2.43e-08 | 39 |
forebrain | 2.43e-08 | 39 |
future forebrain | 2.43e-08 | 39 |
ectoderm-derived structure | 2.84e-08 | 95 |
ectoderm | 2.84e-08 | 95 |
presumptive ectoderm | 2.84e-08 | 95 |
pre-chordal neural plate | 4.03e-08 | 49 |
anterior neural tube | 4.13e-08 | 40 |
ecto-epithelium | 7.55e-08 | 73 |
regional part of brain | 6.23e-07 | 46 |