FFCP PHASE1:Mm9::chr19:10257484..10257495,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76267 | |EntrezGene=76267 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3169 | |||
|TSSclassifier=NA | |||
|UniProt=Q920L1 | |UniProt=Q920L1 | ||
|association_with_transcript=106bp_to_ENSMUST00000010807,NM_146094,uc008gpd.2,uc008gpe.2_5end | |association_with_transcript=106bp_to_ENSMUST00000010807,NM_146094,uc008gpd.2,uc008gpe.2_5end | ||
|cluster_id=chr19:10257484..10257495,+ | |||
|description=CAGE_peak_5_at_Fads1_5end | |description=CAGE_peak_5_at_Fads1_5end | ||
|id=chr19:10257484..10257495,+ | |id=chr19:10257484..10257495,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.09e-14!50;CL:0002319!5.49e-13!43;CL:0000221!7.17e-13!44;CL:0000133!7.17e-13!44;CL:0000393!7.50e-11!39;CL:0000211!7.50e-11!39;CL:0002321!4.84e-10!70;CL:0000220!4.84e-10!70;CL:0000540!8.77e-10!33;CL:0000047!8.77e-10!33;CL:0000031!8.77e-10!33;CL:0000404!8.77e-10!33;CL:0000117!5.37e-09!23;CL:0000337!5.37e-09!23 | |ontology_enrichment_celltype=CL:0000055!2.09e-14!50;CL:0002319!5.49e-13!43;CL:0000221!7.17e-13!44;CL:0000133!7.17e-13!44;CL:0000393!7.50e-11!39;CL:0000211!7.50e-11!39;CL:0002321!4.84e-10!70;CL:0000220!4.84e-10!70;CL:0000540!8.77e-10!33;CL:0000047!8.77e-10!33;CL:0000031!8.77e-10!33;CL:0000404!8.77e-10!33;CL:0000117!5.37e-09!23;CL:0000337!5.37e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.96e-13,43;CL:0000221,5.20e-13,44;CL:0000133,5.20e-13,44;CL:0000393,5.76e-11,39;CL:0000211,5.76e-11,39;CL:0002321,1.97e-10,70;CL:0000540,6.94e-10,33;CL:0000047,6.94e-10,33;CL:0000031,6.94e-10,33;CL:0000404,6.94e-10,33;CL:0000117,4.35e-09,23;CL:0000337,4.35e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.52e-19!75;UBERON:0001016!1.52e-19!75;UBERON:0001017!2.07e-19!73;UBERON:0005743!2.07e-19!73;UBERON:0004121!1.13e-18!102;UBERON:0000924!1.13e-18!102;UBERON:0006601!1.13e-18!102;UBERON:0002346!1.14e-16!71;UBERON:0003075!1.14e-16!71;UBERON:0007284!1.14e-16!71;UBERON:0001049!7.45e-14!52;UBERON:0005068!7.45e-14!52;UBERON:0006241!7.45e-14!52;UBERON:0007135!7.45e-14!52;UBERON:0000025!7.67e-13!114;UBERON:0000955!2.13e-12!50;UBERON:0006238!2.13e-12!50;UBERON:0002616!2.29e-12!49;UBERON:0004111!3.45e-11!122;UBERON:0002020!4.05e-11!34;UBERON:0003080!1.05e-10!40;UBERON:0002780!3.03e-10!39;UBERON:0001890!3.03e-10!39;UBERON:0006240!3.03e-10!39;UBERON:0000033!3.98e-10!63;UBERON:0003056!6.91e-10!49;UBERON:0002791!1.93e-09!29;UBERON:0003528!1.93e-09!29;UBERON:0001893!1.93e-09!29;UBERON:0000956!4.59e-07!21;UBERON:0001869!4.59e-07!21;UBERON:0000203!4.59e-07!21;UBERON:0005256!6.47e-07!47;UBERON:0002365!8.22e-07!25;UBERON:0002330!8.22e-07!25 | |ontology_enrichment_uberon=UBERON:0000073!1.52e-19!75;UBERON:0001016!1.52e-19!75;UBERON:0001017!2.07e-19!73;UBERON:0005743!2.07e-19!73;UBERON:0004121!1.13e-18!102;UBERON:0000924!1.13e-18!102;UBERON:0006601!1.13e-18!102;UBERON:0002346!1.14e-16!71;UBERON:0003075!1.14e-16!71;UBERON:0007284!1.14e-16!71;UBERON:0001049!7.45e-14!52;UBERON:0005068!7.45e-14!52;UBERON:0006241!7.45e-14!52;UBERON:0007135!7.45e-14!52;UBERON:0000025!7.67e-13!114;UBERON:0000955!2.13e-12!50;UBERON:0006238!2.13e-12!50;UBERON:0002616!2.29e-12!49;UBERON:0004111!3.45e-11!122;UBERON:0002020!4.05e-11!34;UBERON:0003080!1.05e-10!40;UBERON:0002780!3.03e-10!39;UBERON:0001890!3.03e-10!39;UBERON:0006240!3.03e-10!39;UBERON:0000033!3.98e-10!63;UBERON:0003056!6.91e-10!49;UBERON:0002791!1.93e-09!29;UBERON:0003528!1.93e-09!29;UBERON:0001893!1.93e-09!29;UBERON:0000956!4.59e-07!21;UBERON:0001869!4.59e-07!21;UBERON:0000203!4.59e-07!21;UBERON:0005256!6.47e-07!47;UBERON:0002365!8.22e-07!25;UBERON:0002330!8.22e-07!25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.12e-20,75;UBERON:0001017,1.24e-19,73;UBERON:0004121,3.46e-15,95;UBERON:0000924,3.46e-15,95;UBERON:0006601,3.46e-15,95;UBERON:0000073,2.75e-14,54;UBERON:0001049,5.25e-14,52;UBERON:0005068,5.25e-14,52;UBERON:0006241,5.25e-14,52;UBERON:0007135,5.25e-14,52;UBERON:0002346,1.98e-13,64;UBERON:0003075,1.98e-13,64;UBERON:0007284,1.98e-13,64;UBERON:0000025,1.80e-12,114;UBERON:0000955,9.47e-12,47;UBERON:0006238,9.47e-12,47;UBERON:0002616,1.02e-11,46;UBERON:0010371,1.74e-11,73;UBERON:0002020,3.09e-11,34;UBERON:0004111,7.11e-11,122;UBERON:0003080,8.13e-11,40;UBERON:0002780,2.36e-10,39;UBERON:0001890,2.36e-10,39;UBERON:0006240,2.36e-10,39;UBERON:0010314,4.61e-10,92;UBERON:0003056,5.74e-10,49;UBERON:0003528,1.54e-09,29;UBERON:0002791,1.54e-09,29;UBERON:0001893,1.54e-09,29;UBERON:0005256,1.85e-07,45;UBERON:0000956,3.92e-07,21;UBERON:0001869,3.92e-07,21;UBERON:0000203,3.92e-07,21;UBERON:0002365,7.17e-07,25;UBERON:0002330,7.17e-07,25 | |||
|phase1_expression=1.76163731815273,0,0,0,0,1.34303417529512,0.700837921786577,0.387369970324729,0.140788722151667,0,0.34243593645101,0.398860794976682,0.513602189793617,0.874204024189974,1.33243904726265,1.21485160433896,0.699561878128147,0,0.274228867211478,0,1.87095238332354,1.29078236561151,1.56719873483361,1.27993938234725,1.14704640533585,0,0,0.430942465371778,0.760093677825496,0.504060259519861,0.221730510655305,1.90509202037889,5.53558308826113,0,3.46621943701529,2.99222361645286,2.85837098767317,0,0,0,0,0,0,4.02869817521847,5.06884656097573,4.22157529971868,2.34717403304412,6.75877984779384,7.0299578475031,7.38833616482277,7.13930750289349,8.62515386189829,0,0,0,3.8588915405392,2.29226751951005,4.12537673821954,6.06949382578793,7.40587370980846,4.43681982454325,3.72728985276045,16.0073063300005,4.04954872776629,4.94433181283487,0.7104801149461,5.39280198933128,4.99483796918021,7.25827286159344,7.56033254657468,4.20649922702764,3.14216082844184,7.28866185140325,5.63457676388789,3.73797336971122,8.27296907949019,3.30347642998166,5.10749352340751,4.45458946443106,7.25374582516066,6.22115976496386,6.77187381723788,4.18774498502071,2.25105044012672,5.04234217663473,5.59794312399969,3.70166370077668,7.45597783301202,1.66597625333005,5.51672388779534,0.869593466105033,4.30211938490693,6.11974200336975,7.55584468292944,8.4470934268197,5.82434953226536,4.49422144421606,10.2258193546835,10.6512261887176,12.0135455333516,2.53518155598025,7.69958864485907,5.09610479413291,0,0.649473123033642,1.01343946190039,2.02209778005913,4.68153906848146,0.517875767294343,7.86743337043571,5.37804512975021,8.52503339273995,7.14908041493781,9.79697163592047,3.52766121407114,7.1629957057915,0.494389935468748,1.3013942122792,1.76922110389975,1.94120219936891,0.883366073841574,0.484875253135222,0,3.22058876712702,3.56059401582874,1.02182822083437,0.479260498023681,0.599902730993408,0.508280908292259,6.29120685500255,4.11750542536764,5.40313714085317,3.12883776346098,4.34716277461562,5.40248915854856,3.89379031362618,2.54598409625791,1.99051152976149,4.80173241023982,1.47309299120532,4.16385417480652,2.5289231487682,3.78130472591233,2.10986744970001,3.53789795586905,2.8185018462667,2.81105173679186,0.517406741478031,5.17363183038821,4.34943984385984,4.92663147659057,3.5071317188412,3.33656699070717,1.0447564995665,1.4404749548556,2.7864797354589,0,0.51469581422943,0.284163499395593,1.24275463521301,1.17263029990548,1.62055855314913,2.3674473558521,1.96764231747404,1.23413690309903,1.16266972375204,0.804820204198858,0.934122738937356,1.6455984991348,0.656669856316381,0.486412857275134,0.584799949701329,1.75640092232841,0.536825675041487,2.73376933133365,7.40913209130848,0,0.793351699990633,2.77274725695804,3.48355007790658,3.8660238396628,5.64713868945359,2.89091456998331,4.94586627892654,0,0.658795818896044,1.50801125280162,2.38747766449381,2.14460495831032,1.79763881730844,1.29682829924817,1.1948476395262,1.89667900953082,2.85621281524322,4.50830942692322,1.62921062276251,0.969762435838129,1.1221731182451,0.948548056863859,2.65698266363284,2.04098346193787,1.35736880313981,8.00422093135302,1.66845105716094,3.14494392181125,2.69834534861824,3.24576194221605,5.06472035480075,4.83789118384698,3.74004978686054,1.29708181420028,3.84385978463314,7.18841032636773,10.7920874823866,9.67316786655138,7.82994521636046,10.7638448113147,6.75420929908714,2.58654466233247,2.27389694124582,2.93336957595647,2.37643120085263,2.81628297946203,2.1775813467436,1.42826184531608,0.780534591431195,1.57635144106191,1.10732344824387,1.91345722388985,2.29408640602033,2.59027472798843,1.59113964439663,0,1.63171705145613,16.2282210096282,11.313406598494,2.88991061978026,4.80567915028033,9.50822683184717,0,2.2085575359138,3.12350995437311,4.73931475012158,3.34556317133573,3.7875774594007,3.96307143104365,3.64329631507405,3.79932615284705,5.13874111330481,2.89189184779626,3.26462195979018,2.31485284767432,2.60619134965722,2.14461159864296,1.32745138339963,2.18502572539483,0.604647113929502,2.07465587731488,2.36241514304618,1.22974059177571,1.29214146584111,0.727067458955011,0.356497378384721,0.316036757935816,3.16255825724996,1.03135543248187,3.40439605753788,3.96134406868882,4.2688365648309,2.14337035031592,3.3694644392032,2.49716344642899,3.29098041204242,2.43571959291679,1.17335854031855,1.0591603543191,0.220528398054962,0.32977250588296,0.645857706783622,2.11095237248546,0.835606408021955,0.656563598980245,1.1659233465194,7.23158677840988,1.70870880797853,1.03193433981611,2.03713980106683,2.0720530270516,1.6403307326523,1.60144721244566,0.509935289981566,0.839708713941948,1.10559979043539,0,3.63786392618306,2.23651413839534,2.59212817972323,2.92723614420256,2.40198820120795,0.944050424693745,2.64491058321075,0.523511883968059,0.90730481304255,0,2.81846469342095,2.54178128274764,5.12921320417003,4.27792614356905,5.68303223302017,3.54807863530634,2.69921648885234,2.47388331203505,2.30690557736564,1.44950472495604,1.44015003128933,0.948033361884535,2.4327025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| ||
|short_description=p5@Fads1 | |short_description=p5@Fads1 | ||
}} | }} |
Latest revision as of 20:23, 1 October 2015
Short description: | p5@Fads1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Fads1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3169 |
Association with transcript: | 106bp_to_ENSMUST00000010807, NM_146094, uc008gpd.2, uc008gpe.2_5end |
EntrezGene: | Fads1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.96e-13 | 43 |
ectodermal cell | 5.20e-13 | 44 |
neurectodermal cell | 5.20e-13 | 44 |
electrically responsive cell | 5.76e-11 | 39 |
electrically active cell | 5.76e-11 | 39 |
embryonic cell | 1.97e-10 | 70 |
neuron | 6.94e-10 | 33 |
neuronal stem cell | 6.94e-10 | 33 |
neuroblast | 6.94e-10 | 33 |
electrically signaling cell | 6.94e-10 | 33 |
CNS neuron (sensu Vertebrata) | 4.35e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.35e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.12e-20 | 75 |
central nervous system | 1.24e-19 | 73 |
ectoderm-derived structure | 3.46e-15 | 95 |
ectoderm | 3.46e-15 | 95 |
presumptive ectoderm | 3.46e-15 | 95 |
regional part of nervous system | 2.75e-14 | 54 |
neural tube | 5.25e-14 | 52 |
neural rod | 5.25e-14 | 52 |
future spinal cord | 5.25e-14 | 52 |
neural keel | 5.25e-14 | 52 |
neurectoderm | 1.98e-13 | 64 |
neural plate | 1.98e-13 | 64 |
presumptive neural plate | 1.98e-13 | 64 |
tube | 1.80e-12 | 114 |
brain | 9.47e-12 | 47 |
future brain | 9.47e-12 | 47 |
regional part of brain | 1.02e-11 | 46 |
ecto-epithelium | 1.74e-11 | 73 |
gray matter | 3.09e-11 | 34 |
anatomical conduit | 7.11e-11 | 122 |
anterior neural tube | 8.13e-11 | 40 |
regional part of forebrain | 2.36e-10 | 39 |
forebrain | 2.36e-10 | 39 |
future forebrain | 2.36e-10 | 39 |
structure with developmental contribution from neural crest | 4.61e-10 | 92 |
pre-chordal neural plate | 5.74e-10 | 49 |
brain grey matter | 1.54e-09 | 29 |
regional part of telencephalon | 1.54e-09 | 29 |
telencephalon | 1.54e-09 | 29 |
trunk mesenchyme | 1.85e-07 | 45 |
cerebral cortex | 3.92e-07 | 21 |
cerebral hemisphere | 3.92e-07 | 21 |
pallium | 3.92e-07 | 21 |
exocrine gland | 7.17e-07 | 25 |
exocrine system | 7.17e-07 | 25 |