FFCP PHASE1:Mm9::chr19:18824214..18824233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225997 | |EntrezGene=225997 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8CIR4 | |UniProt=Q8CIR4 | ||
|association_with_transcript=-239bp_to_ENSMUST00000040489,NM_153417,uc008gya.1,uc012bjh.1_5end | |association_with_transcript=-239bp_to_ENSMUST00000040489,NM_153417,uc008gya.1,uc012bjh.1_5end | ||
|cluster_id=chr19:18824214..18824233,+ | |||
|description=CAGE_peak_2_at_Trpm6_5end | |description=CAGE_peak_2_at_Trpm6_5end | ||
|id=chr19:18824214..18824233,+ | |id=chr19:18824214..18824233,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.58e-08!15;UBERON:0002048!2.62e-07!14;UBERON:0000117!2.62e-07!14;UBERON:0000171!2.62e-07!14;UBERON:0000170!2.62e-07!14;UBERON:0005597!2.62e-07!14;UBERON:0000118!2.62e-07!14;UBERON:0001242!6.54e-07!13;UBERON:0000060!6.54e-07!13;UBERON:0001262!6.54e-07!13;UBERON:0004786!6.54e-07!13 | |ontology_enrichment_uberon=UBERON:0000344!3.58e-08!15;UBERON:0002048!2.62e-07!14;UBERON:0000117!2.62e-07!14;UBERON:0000171!2.62e-07!14;UBERON:0000170!2.62e-07!14;UBERON:0005597!2.62e-07!14;UBERON:0000118!2.62e-07!14;UBERON:0001242!6.54e-07!13;UBERON:0000060!6.54e-07!13;UBERON:0001262!6.54e-07!13;UBERON:0004786!6.54e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.88e-17,14;UBERON:0000117,1.88e-17,14;UBERON:0000171,1.88e-17,14;UBERON:0000170,1.88e-17,14;UBERON:0005597,1.88e-17,14;UBERON:0000118,1.88e-17,14;UBERON:0005153,5.23e-14,17;UBERON:0005178,5.23e-14,17;UBERON:0005181,5.23e-14,17;UBERON:0002224,5.23e-14,17;UBERON:0000915,5.23e-14,17;UBERON:0008947,5.23e-14,17;UBERON:0003258,5.23e-14,17;UBERON:0005157,1.34e-11,20;UBERON:0000331,4.73e-08,3;UBERON:0002116,4.73e-08,3;UBERON:0001204,4.73e-08,3;UBERON:0001168,4.73e-08,3 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,0.90739263392049,0.500895729946347,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.799962113967033,1.14704640533585,2.29692785646008,0.430761996159075,0.861884930743556,2.85035129184561,1.51218077855958,1.33038306393183,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0.45839474333043,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0,0,1.1418387971906,0.776813650941515,0,0,0,0,0,0,0,1.48316980640624,0.144599356919912,0,0,0,0,7.45567044872489,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0,0.347648640384553,0,0.62336413367868,0.324482526135515,0,0.124406970610093,0.252722758433675,1.89397670297827,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,2.37264530772256,0,0.251335208800269,0,0.58489226135736,1.79763881730844,1.29682829924817,1.7922714592893,0,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.701358198903186,1.58091342810643,2.36176236767363,1.8839847340965,3.94870924549762,0,0,0,0,0,0,0,0,0,0,0,0,0.936113019343682,0.505157755894224,0.179397413521912,0,2.58654466233247,0,0,0,0.469380496577004,3.01511263395268,2.38043640886014,2.73187107000918,1.57635144106191,2.87904096543407,1.2756381492599,3.76885623846197,2.59027472798843,3.03763023021174,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0,0.162886959353576,2.3095817216155,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.42366414172764,0,1.15420377059036,0.161464426695906,0.180938774784468,0.238744688006273,2.46211349617592,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,7.51766845092399,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.386379188064381,6.75656911624255,1.46521299413812,0.643105137237198,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.726732083161643,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0,0.197008964751127,0.409231043169689,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,1.39590163055744,0.454999239389536,0.90739263392049,0.500895729946347,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.799962113967033,1.14704640533585,2.29692785646008,0.430761996159075,0.861884930743556,2.85035129184561,1.51218077855958,1.33038306393183,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0,0,0.45839474333043,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0,0,1.1418387971906,0.776813650941515,0,0,0,0,0,0,0,1.48316980640624,0.144599356919912,0,0,0,0,7.45567044872489,0,0,0.255457055208591,0,0,0,0,0.457500602818626,0,0.347648640384553,0,0.62336413367868,0.324482526135515,0,0.124406970610093,0.252722758433675,1.89397670297827,0.130120442962704,0,0,0.150704817835715,0,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0,0,0,0,2.37264530772256,0,0.251335208800269,0,0.58489226135736,1.79763881730844,1.29682829924817,1.7922714592893,0,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.701358198903186,1.58091342810643,2.36176236767363,1.8839847340965,3.94870924549762,0,0,0,0,0,0,0,0,0,0,0,0,0.936113019343682,0.505157755894224,0.179397413521912,0,2.58654466233247,0,0,0,0.469380496577004,3.01511263395268,2.38043640886014,2.73187107000918,1.57635144106191,2.87904096543407,1.2756381492599,3.76885623846197,2.59027472798843,3.03763023021174,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0,0.162886959353576,2.3095817216155,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.42366414172764,0,1.15420377059036,0.161464426695906,0.180938774784468,0.238744688006273,2.46211349617592,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,7.51766845092399,0,0,0,0,0,0,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.386379188064381,6.75656911624255,1.46521299413812,0.643105137237198,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.726732083161643,0.188218760830661,0.0846146078916765,0,0.263069711437843,0,0,0,0.197008964751127,0.409231043169689,0,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p2@Trpm6 | |short_description=p2@Trpm6 | ||
}} | }} |
Latest revision as of 23:14, 1 October 2015
Short description: | p2@Trpm6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trpm6_5end |
Coexpression cluster: | NA |
Association with transcript: | -239bp_to_ENSMUST00000040489, NM_153417, uc008gya.1, uc012bjh.1_5end |
EntrezGene: | Trpm6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 1.88e-17 | 14 |
respiratory tube | 1.88e-17 | 14 |
respiration organ | 1.88e-17 | 14 |
pair of lungs | 1.88e-17 | 14 |
lung primordium | 1.88e-17 | 14 |
lung bud | 1.88e-17 | 14 |
epithelial bud | 5.23e-14 | 17 |
thoracic cavity element | 5.23e-14 | 17 |
thoracic segment organ | 5.23e-14 | 17 |
thoracic cavity | 5.23e-14 | 17 |
thoracic segment of trunk | 5.23e-14 | 17 |
respiratory primordium | 5.23e-14 | 17 |
endoderm of foregut | 5.23e-14 | 17 |
epithelial fold | 1.34e-11 | 20 |
ileal mucosa | 4.73e-08 | 3 |
ileum | 4.73e-08 | 3 |
mucosa of small intestine | 4.73e-08 | 3 |
wall of small intestine | 4.73e-08 | 3 |