FFCP PHASE1:Mm9::chr19:53464161..53464165,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:53464161..53464165,- | |||
|description=CAGE_peak_at_chr19:53464161..53464165,- | |description=CAGE_peak_at_chr19:53464161..53464165,- | ||
|id=chr19:53464161..53464165,- | |id=chr19:53464161..53464165,- | ||
|ontology_enrichment_celltype=CL:0000542!2.12e-08!13;CL:0000051!2.12e-08!13;CL:0000838!5.96e-08!12;CL:0000988!1.28e-07!32;CL:0002032!1.28e-07!32;CL:0000037!1.28e-07!32;CL:0000566!1.28e-07!32;CL:0000837!1.28e-07!32;CL:0000084!2.88e-07!11;CL:0000827!2.88e-07!11 | |ontology_enrichment_celltype=CL:0000542!2.12e-08!13;CL:0000051!2.12e-08!13;CL:0000838!5.96e-08!12;CL:0000988!1.28e-07!32;CL:0002032!1.28e-07!32;CL:0000037!1.28e-07!32;CL:0000566!1.28e-07!32;CL:0000837!1.28e-07!32;CL:0000084!2.88e-07!11;CL:0000827!2.88e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.75e-20,12;CL:0000542,2.76e-18,13;CL:0000051,2.76e-18,13;CL:0000084,1.18e-16,11;CL:0000827,1.18e-16,11;CL:0000988,1.60e-15,32;CL:0002032,1.60e-15,32;CL:0000037,1.60e-15,32;CL:0000837,1.60e-15,32;CL:0000791,3.48e-15,9;CL:0000789,3.48e-15,9;CL:0002420,3.48e-15,9;CL:0002419,3.48e-15,9;CL:0000790,3.48e-15,9;CL:0000738,9.95e-14,17;CL:0002087,9.95e-14,17;CL:0000624,4.92e-12,8;CL:0002320,5.68e-12,46;CL:0000134,5.68e-12,46;CL:0002031,1.80e-11,25;CL:0000219,7.43e-10,54;CL:0000723,3.87e-08,91;CL:0000048,3.87e-08,91;CL:0000034,1.87e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.03e-12,3;DOID:4045,1.03e-12,3;DOID:0050686,4.42e-11,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.68e-12,46 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0,1.42035655785734,2.25261955442667,0.234064526321993,1.36974374580404,0.717949430958028,1.19840510951844,0.699363219351979,0.333109761815663,0.202475267389826,0,0.630924330716475,0.411343300817216,0.42438965179803,0.0850432901510698,1.48936426801328,0.783599367416806,0.319984845586813,0,0,0.430761996159075,0,0,0,0,3.17515336729816,0,0,0,0.332469290716985,0.204169356262369,1.25559489221072,3.1253413780952,3.66466620781659,8.82347232046521,5.46436387966757,3.39857247121808,0,0,0.367093504323363,0,0.218025156380447,0,0,0.139986421625363,0,2.18117387875057,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0.414758449233911,0.270011876663381,0,0.285650984403804,0.220868540951614,0,0.287536413054709,0.919218786610021,0,0.255374676170375,0.153606533256243,0.263772575460388,0.182975287204819,0,0,0,0,0.294628585473668,0.284743361598206,0,0.227178579999552,0.377857800533928,0.869593466105033,0,0,0,0,0,0,0,0.259786004602869,1.06001872353102,0.422530259330042,1.28326477414318,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0,0,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.251333182659351,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0.510914110417183,1.1981512450592,0,0.635351135365324,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,0.203678727700633,0.373220911830279,0.252722758433675,0,0.390361328888111,0,0.180062129805349,0,0.204109497453984,0.2562274405697,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0.702213187313235,1.28673953557358,1.98914449576915,0,0,0,0.23674473558521,0.196764231747404,0.925602677324269,0.232533944750408,0.268273401399619,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0,0,0,0,0.329397909448022,0.754005626400808,0.596869416123452,0.19496408711912,0.898819408654221,0.648414149624083,0.398282546508734,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,0,0,0.162964976442026,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.604647113929502,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0,0.608929898229199,0.23467170806371,0.63549621259146,0,0,0,0.301564624640779,0.358117032009409,0.656563598980245,0.582961673259701,0,0,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0.169978429993855,0.69975726161829,0.690999869022119,0,0.316335993581135,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0.897099276263873,0.496375471371293,0,0.129159823477731,0.337912250981556,0.352071715937262,0.2604087696879,0.524296722128554,0,0.576060012515731,0.316011120628178,0.405450430580328,0.513554785824136,0.129920822977795,0.537080087002444,0.39736270956253,0.240390899039938,0.295379054349154,0.302899349844443,0.457240839929999,0.504130925684203,0.38983152295901,0.865906574762965,0.350630706544707,0.453460767230423,0,0.807424709485281,0.167884616364078,0,0.375364950902364,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.114870937911227,0.476293691283074,0,0.38581844092741,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.338458431566706,0.365855945745545,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.578719832943424,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 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|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0,1.42035655785734,2.25261955442667,0.234064526321993,1.36974374580404,0.717949430958028,1.19840510951844,0.699363219351979,0.333109761815663,0.202475267389826,0,0.630924330716475,0.411343300817216,0.42438965179803,0.0850432901510698,1.48936426801328,0.783599367416806,0.319984845586813,0,0,0.430761996159075,0,0,0,0,3.17515336729816,0,0,0,0.332469290716985,0.204169356262369,1.25559489221072,3.1253413780952,3.66466620781659,8.82347232046521,5.46436387966757,3.39857247121808,0,0,0.367093504323363,0,0.218025156380447,0,0,0.139986421625363,0,2.18117387875057,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0.414758449233911,0.270011876663381,0,0.285650984403804,0.220868540951614,0,0.287536413054709,0.919218786610021,0,0.255374676170375,0.153606533256243,0.263772575460388,0.182975287204819,0,0,0,0,0.294628585473668,0.284743361598206,0,0.227178579999552,0.377857800533928,0.869593466105033,0,0,0,0,0,0,0,0.259786004602869,1.06001872353102,0.422530259330042,1.28326477414318,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0,0,0.29688427812965,0.173485326766136,0,0,0.301445281105245,0.352766121407114,0.251333182659351,0.494389935468748,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0.510914110417183,1.1981512450592,0,0.635351135365324,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0,0.203678727700633,0.373220911830279,0.252722758433675,0,0.390361328888111,0,0.180062129805349,0,0.204109497453984,0.2562274405697,0.374806898238915,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0.199034266818493,0.702213187313235,1.28673953557358,1.98914449576915,0,0,0,0.23674473558521,0.196764231747404,0.925602677324269,0.232533944750408,0.268273401399619,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0,0,0,0,0.329397909448022,0.754005626400808,0.596869416123452,0.19496408711912,0.898819408654221,0.648414149624083,0.398282546508734,0.189667900953082,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,0,0,0.162964976442026,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.604647113929502,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0,0.608929898229199,0.23467170806371,0.63549621259146,0,0,0,0.301564624640779,0.358117032009409,0.656563598980245,0.582961673259701,0,0,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0.169978429993855,0.69975726161829,0.690999869022119,0,0.316335993581135,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,0.134864346384821,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0.897099276263873,0.496375471371293,0,0.129159823477731,0.337912250981556,0.352071715937262,0.2604087696879,0.524296722128554,0,0.576060012515731,0.316011120628178,0.405450430580328,0.513554785824136,0.129920822977795,0.537080087002444,0.39736270956253,0.240390899039938,0.295379054349154,0.302899349844443,0.457240839929999,0.504130925684203,0.38983152295901,0.865906574762965,0.350630706544707,0.453460767230423,0,0.807424709485281,0.167884616364078,0,0.375364950902364,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.114870937911227,0.476293691283074,0,0.38581844092741,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.338458431566706,0.365855945745545,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.578719832943424,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr19:53464161..53464165,- | |short_description=p@chr19:53464161..53464165,- | ||
}} | }} |
Latest revision as of 07:49, 4 August 2015
Short description: | p@chr19:53464161..53464165, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:53464161..53464165, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.75e-20 | 12 |
lymphocyte | 2.76e-18 | 13 |
common lymphoid progenitor | 2.76e-18 | 13 |
T cell | 1.18e-16 | 11 |
pro-T cell | 1.18e-16 | 11 |
hematopoietic cell | 1.60e-15 | 32 |
hematopoietic oligopotent progenitor cell | 1.60e-15 | 32 |
hematopoietic stem cell | 1.60e-15 | 32 |
hematopoietic multipotent progenitor cell | 1.60e-15 | 32 |
mature alpha-beta T cell | 3.48e-15 | 9 |
alpha-beta T cell | 3.48e-15 | 9 |
immature T cell | 3.48e-15 | 9 |
mature T cell | 3.48e-15 | 9 |
immature alpha-beta T cell | 3.48e-15 | 9 |
leukocyte | 9.95e-14 | 17 |
nongranular leukocyte | 9.95e-14 | 17 |
CD4-positive, alpha-beta T cell | 4.92e-12 | 8 |
connective tissue cell | 5.68e-12 | 46 |
mesenchymal cell | 5.68e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 1.80e-11 | 25 |
motile cell | 7.43e-10 | 54 |
somatic stem cell | 3.87e-08 | 91 |
multi fate stem cell | 3.87e-08 | 91 |
stem cell | 1.87e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.68e-12 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.03e-12 | 3 |
muscle cancer | 1.03e-12 | 3 |
organ system cancer | 4.42e-11 | 6 |