FFCP PHASE1:Mm9::chr1:108609006..108609033,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=974 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:108609006..108609033,- | |||
|description=CAGE_peak_at_chr1:108609006..108609033,- | |description=CAGE_peak_at_chr1:108609006..108609033,- | ||
|id=chr1:108609006..108609033,- | |id=chr1:108609006..108609033,- | ||
|ontology_enrichment_celltype=CL:0000838!2.85e-10!12;CL:0000542!5.21e-10!13;CL:0000051!5.21e-10!13;CL:0000084!1.03e-09!11;CL:0000827!1.03e-09!11;CL:0000738!2.06e-08!17;CL:0002087!2.06e-08!17;CL:0002031!3.48e-08!25;CL:0000791!4.04e-08!9;CL:0000789!4.04e-08!9;CL:0002420!4.04e-08!9;CL:0002419!4.04e-08!9;CL:0000790!4.04e-08!9;CL:0000988!7.42e-08!32;CL:0002032!7.42e-08!32;CL:0000037!7.42e-08!32;CL:0000566!7.42e-08!32;CL:0000837!7.42e-08!32;CL:0000624!2.24e-07!8 | |ontology_enrichment_celltype=CL:0000838!2.85e-10!12;CL:0000542!5.21e-10!13;CL:0000051!5.21e-10!13;CL:0000084!1.03e-09!11;CL:0000827!1.03e-09!11;CL:0000738!2.06e-08!17;CL:0002087!2.06e-08!17;CL:0002031!3.48e-08!25;CL:0000791!4.04e-08!9;CL:0000789!4.04e-08!9;CL:0002420!4.04e-08!9;CL:0002419!4.04e-08!9;CL:0000790!4.04e-08!9;CL:0000988!7.42e-08!32;CL:0002032!7.42e-08!32;CL:0000037!7.42e-08!32;CL:0000566!7.42e-08!32;CL:0000837!7.42e-08!32;CL:0000624!2.24e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.36e-28,12;CL:0000084,1.23e-26,11;CL:0000827,1.23e-26,11;CL:0000542,5.99e-26,13;CL:0000051,5.99e-26,13;CL:0002031,5.66e-25,25;CL:0000988,2.10e-23,32;CL:0002032,2.10e-23,32;CL:0000037,2.10e-23,32;CL:0000837,2.10e-23,32;CL:0000738,3.21e-22,17;CL:0002087,3.21e-22,17;CL:0000791,9.93e-22,9;CL:0000789,9.93e-22,9;CL:0002420,9.93e-22,9;CL:0002419,9.93e-22,9;CL:0000790,9.93e-22,9;CL:0000624,1.91e-19,8;CL:0000893,5.10e-15,6;CL:0002489,5.10e-15,6;CL:0000898,5.10e-15,6;CL:0000809,5.10e-15,6;CL:0000810,5.10e-15,6;CL:0000895,5.10e-15,6;CL:0000808,5.10e-15,6;CL:0000894,5.10e-15,6;CL:0000806,5.10e-15,6;CL:0000807,5.10e-15,6;CL:0000805,5.10e-15,6;CL:0002425,5.10e-15,6;CL:0002436,5.10e-15,6;CL:0002427,5.10e-15,6;CL:0002428,5.10e-15,6;CL:0002429,5.10e-15,6;CL:0002433,5.10e-15,6;CL:0002431,5.10e-15,6;CL:0002432,5.10e-15,6;CL:0002320,7.86e-15,46;CL:0000134,7.86e-15,46;CL:0000219,6.09e-12,54;CL:0000723,1.33e-08,91;CL:0000048,1.33e-08,91;CL:0000034,9.69e-08,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!5.58e-09!86;UBERON:0004177!7.09e-09!29;UBERON:0002193!1.99e-08!48;UBERON:0002390!3.84e-08!45;UBERON:0003061!3.84e-08!45;UBERON:0002370!6.25e-08!23;UBERON:0000974!6.25e-08!23;UBERON:0004807!6.25e-08!23;UBERON:0005058!6.25e-08!23;UBERON:0003351!6.25e-08!23;UBERON:0009113!6.25e-08!23;UBERON:0003295!6.25e-08!23;UBERON:0009722!6.25e-08!23;UBERON:0005562!6.25e-08!23;UBERON:0007690!6.25e-08!23;UBERON:0000153!1.32e-07!94;UBERON:0000477!2.01e-07!154;UBERON:0006562!3.05e-07!24;UBERON:0003408!3.05e-07!24;UBERON:0001557!3.05e-07!24;UBERON:0001042!3.05e-07!24;UBERON:0008814!3.05e-07!24;UBERON:0009145!3.05e-07!24 | |ontology_enrichment_uberon=UBERON:0007811!5.58e-09!86;UBERON:0004177!7.09e-09!29;UBERON:0002193!1.99e-08!48;UBERON:0002390!3.84e-08!45;UBERON:0003061!3.84e-08!45;UBERON:0002370!6.25e-08!23;UBERON:0000974!6.25e-08!23;UBERON:0004807!6.25e-08!23;UBERON:0005058!6.25e-08!23;UBERON:0003351!6.25e-08!23;UBERON:0009113!6.25e-08!23;UBERON:0003295!6.25e-08!23;UBERON:0009722!6.25e-08!23;UBERON:0005562!6.25e-08!23;UBERON:0007690!6.25e-08!23;UBERON:0000153!1.32e-07!94;UBERON:0000477!2.01e-07!154;UBERON:0006562!3.05e-07!24;UBERON:0003408!3.05e-07!24;UBERON:0001557!3.05e-07!24;UBERON:0001042!3.05e-07!24;UBERON:0008814!3.05e-07!24;UBERON:0009145!3.05e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.86e-15,46;UBERON:0002193,5.54e-09,48;UBERON:0002405,5.54e-09,48;UBERON:0002390,2.24e-08,45;UBERON:0003061,2.24e-08,45;UBERON:0002370,8.99e-07,23;UBERON:0000974,8.99e-07,23;UBERON:0004807,8.99e-07,23;UBERON:0005058,8.99e-07,23;UBERON:0003351,8.99e-07,23;UBERON:0009113,8.99e-07,23;UBERON:0003295,8.99e-07,23;UBERON:0009722,8.99e-07,23;UBERON:0005562,8.99e-07,23;UBERON:0007690,8.99e-07,23 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,16.6569087239633,3.66050677594334,5.38348410540585,2.39705155515707,3.19088635981346,5.82082481766099,6.90621179110079,0.666219523631325,1.61980213911861,0,3.15462165358238,2.74228867211478,3.39511721438424,0.255129870453209,30.8794858234753,24.8139799681989,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0,0.659058548203415,0.388859798148567,0.139986421625363,0,1.17447824240415,2.17608642603403,3.6970317905671,0,0,0,0.404632921719196,0,2.53532561402472,0,0,0,0,0,0.299600110518405,1.15265491596466,0.103689612308478,0,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0,0,0,1.0214987046815,1.22885226604995,0.263772575460388,0.182975287204819,0.52091337055676,0.837548997004143,0.56276261003168,1.83357897332172,0,0.569486723196412,0.931997229126503,0.151452386666368,0.377857800533928,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0.34255163915718,14.5005214842416,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,1.01219549843938,0.884610551949874,0.323533699894818,0,0,0,0.292780797011547,0.41889341362691,0.766371165625774,1.7972268675888,0,1.52484272487678,0.748953197024114,1.83000241127451,0.125654352112864,0.347648640384553,0.767146371990992,1.45451631191692,0.648965052271031,0,0.248813941220186,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0,0,0,0.852490498186778,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0.402619256281115,0.420579897128254,0.411618449517138,2.64335026387038,0,0.213288250535234,0,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0,0.502670417600539,0,0.19496408711912,0,0.432276099749388,0,0,0.342745537829186,0,0,0,0.140271639780637,0.252946148497029,0.147610147979602,0.470996183524124,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,0.315270288212382,0,0.159454768657487,0.327726629431476,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,0.642202359951168,1.05490517932983,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.584511715822624,0,1.92792789853084,0.567760340833074,0,0,2.47455184458803,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.608929898229199,0,0,0.661585194164886,2.14352128823924,0.161464426695906,0.241251699712623,0,0,0.291480836629851,1.48340241608408,1.53783792718067,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,0.339956859987711,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.247960367176008,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,1.26404448251271,0.202725215290164,0.718976700153791,0.389762468933385,0.179026695667481,0.79472541912506,0.961563596159751,0.443068581523732,0.807731599585181,0.381034033274999,0.907435666231565,0.779663045918019,1.15454209968395,1.05189211963412,0,0,0,0,0.772758376128762,0.187682475451182,0.549454872801795,0.857473516316263,0.501572104035363,0,0.460325236507177,1.14579102687879,0.343706364687375,0,0.755393897389701,0.675022500231806,1.35096360967266,0,0,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0,0,0.294397840268795,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 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|phase1_expression=0.480446541314382,0,0,0,0,0,0,16.6569087239633,3.66050677594334,5.38348410540585,2.39705155515707,3.19088635981346,5.82082481766099,6.90621179110079,0.666219523631325,1.61980213911861,0,3.15462165358238,2.74228867211478,3.39511721438424,0.255129870453209,30.8794858234753,24.8139799681989,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0,0.659058548203415,0.388859798148567,0.139986421625363,0,1.17447824240415,2.17608642603403,3.6970317905671,0,0,0,0.404632921719196,0,2.53532561402472,0,0,0,0,0,0.299600110518405,1.15265491596466,0.103689612308478,0,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0,0,0,1.0214987046815,1.22885226604995,0.263772575460388,0.182975287204819,0.52091337055676,0.837548997004143,0.56276261003168,1.83357897332172,0,0.569486723196412,0.931997229126503,0.151452386666368,0.377857800533928,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0.34255163915718,14.5005214842416,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,1.01219549843938,0.884610551949874,0.323533699894818,0,0,0,0.292780797011547,0.41889341362691,0.766371165625774,1.7972268675888,0,1.52484272487678,0.748953197024114,1.83000241127451,0.125654352112864,0.347648640384553,0.767146371990992,1.45451631191692,0.648965052271031,0,0.248813941220186,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0,0,0,0.852490498186778,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0.402619256281115,0.420579897128254,0.411618449517138,2.64335026387038,0,0.213288250535234,0,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0,0.502670417600539,0,0.19496408711912,0,0.432276099749388,0,0,0.342745537829186,0,0,0,0.140271639780637,0.252946148497029,0.147610147979602,0.470996183524124,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,0.315270288212382,0,0.159454768657487,0.327726629431476,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,0.642202359951168,1.05490517932983,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.584511715822624,0,1.92792789853084,0.567760340833074,0,0,2.47455184458803,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.608929898229199,0,0,0.661585194164886,2.14352128823924,0.161464426695906,0.241251699712623,0,0,0.291480836629851,1.48340241608408,1.53783792718067,0.206386867963223,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,0.339956859987711,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.247960367176008,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0.241584120826006,0,1.26404448251271,0.202725215290164,0.718976700153791,0.389762468933385,0.179026695667481,0.79472541912506,0.961563596159751,0.443068581523732,0.807731599585181,0.381034033274999,0.907435666231565,0.779663045918019,1.15454209968395,1.05189211963412,0,0,0,0,0.772758376128762,0.187682475451182,0.549454872801795,0.857473516316263,0.501572104035363,0,0.460325236507177,1.14579102687879,0.343706364687375,0,0.755393897389701,0.675022500231806,1.35096360967266,0,0,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0,0,0.294397840268795,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr1:108609006..108609033,- | |short_description=p@chr1:108609006..108609033,- | ||
}} | }} |
Latest revision as of 15:13, 4 August 2015
Short description: | p@chr1:108609006..108609033, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:108609006..108609033, - |
Coexpression cluster: | MCL_coexpression_mm9:974 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.86e-15 | 46 |
hemolymphoid system | 5.54e-09 | 48 |
immune system | 5.54e-09 | 48 |
hematopoietic system | 2.24e-08 | 45 |
blood island | 2.24e-08 | 45 |
thymus | 8.99e-07 | 23 |
neck | 8.99e-07 | 23 |
respiratory system epithelium | 8.99e-07 | 23 |
hemolymphoid system gland | 8.99e-07 | 23 |
pharyngeal epithelium | 8.99e-07 | 23 |
thymic region | 8.99e-07 | 23 |
pharyngeal gland | 8.99e-07 | 23 |
entire pharyngeal arch endoderm | 8.99e-07 | 23 |
thymus primordium | 8.99e-07 | 23 |
early pharyngeal endoderm | 8.99e-07 | 23 |