FFCP PHASE1:Mm9::chr1:133964480..133964490,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=213006 | |EntrezGene=213006 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6PDC8 | |UniProt=Q6PDC8 | ||
|association_with_transcript=0bp_to_ENSMUST00000126927,ENSMUST00000159038_5end | |association_with_transcript=0bp_to_ENSMUST00000126927,ENSMUST00000159038_5end | ||
|cluster_id=chr1:133964480..133964490,- | |||
|description=CAGE_peak_3_at_Mfsd4_5end | |description=CAGE_peak_3_at_Mfsd4_5end | ||
|id=chr1:133964480..133964490,- | |id=chr1:133964480..133964490,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.25e-10!51;UBERON:0002021!4.70e-09!10;UBERON:0000411!4.70e-09!10;UBERON:0001950!4.70e-09!10;UBERON:0001049!4.42e-08!52;UBERON:0005068!4.42e-08!52;UBERON:0006241!4.42e-08!52;UBERON:0007135!4.42e-08!52;UBERON:0002346!1.95e-07!71;UBERON:0003075!1.95e-07!71;UBERON:0007284!1.95e-07!71;UBERON:0001017!2.68e-07!73;UBERON:0005743!2.68e-07!73;UBERON:0004121!2.76e-07!102;UBERON:0000924!2.76e-07!102;UBERON:0006601!2.76e-07!102;UBERON:0000073!4.23e-07!75;UBERON:0001016!4.23e-07!75;UBERON:0000955!5.68e-07!50;UBERON:0006238!5.68e-07!50 | |ontology_enrichment_uberon=UBERON:0007023!4.25e-10!51;UBERON:0002021!4.70e-09!10;UBERON:0000411!4.70e-09!10;UBERON:0001950!4.70e-09!10;UBERON:0001049!4.42e-08!52;UBERON:0005068!4.42e-08!52;UBERON:0006241!4.42e-08!52;UBERON:0007135!4.42e-08!52;UBERON:0002346!1.95e-07!71;UBERON:0003075!1.95e-07!71;UBERON:0007284!1.95e-07!71;UBERON:0001017!2.68e-07!73;UBERON:0005743!2.68e-07!73;UBERON:0004121!2.76e-07!102;UBERON:0000924!2.76e-07!102;UBERON:0006601!2.76e-07!102;UBERON:0000073!4.23e-07!75;UBERON:0001016!4.23e-07!75;UBERON:0000955!5.68e-07!50;UBERON:0006238!5.68e-07!50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.35e-20,10;UBERON:0000411,3.35e-20,10;UBERON:0001950,3.35e-20,10;UBERON:0002619,3.05e-13,17;UBERON:0000956,2.48e-12,21;UBERON:0001869,2.48e-12,21;UBERON:0000203,2.48e-12,21;UBERON:0007023,1.73e-10,51;UBERON:0003528,3.46e-08,29;UBERON:0002791,3.46e-08,29;UBERON:0001893,3.46e-08,29;UBERON:0002616,3.90e-07,46;UBERON:0000955,6.51e-07,47;UBERON:0006238,6.51e-07,47 | |||
|phase1_expression=0,0,0.454999239389536,1.51232105653415,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.10556277196391,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0,0,1.14014051673824,0.252030129759931,0.665191531965914,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0.883474163806454,0.122490799214954,0,0,0,0.638436690425939,0.768032666281217,0,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,1.54488862144927,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0.258937883647172,1.33597925158342,0,0,0,0.60289056221049,0.470354828542819,3.89566433121994,0,0.144599356919912,0,0,0.220841518460394,0,1.86391761218122,3.51336956413857,6.0739544975902,1.78819938646014,0,0,0,1.19832511523858,0.457500602818626,0,2.60736480288415,1.53429274398198,0.41557608911912,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0.187403449119458,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0.268412837520744,1.68231958851302,0.102904612379284,2.64335026387038,0,0,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0,0.898819408654221,1.08069024937347,1.7922714592893,0.189667900953082,0.114248512609729,0,0.610953983535943,0.193952487167626,0.631222379012867,1.7706230394792,4.42830443938806,6.12295038581362,5.42947521255922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,3.44234991113325,0.827810238914197,0.80275294993896,0.35163505977661,0,0,0.631016438832513,0,0.646270193198397,0,0,0,0,0.876767573733936,1.18586333383957,0.642642632843614,0.141940085208269,0.178065603667255,0,0.494910368917606,5.30980553359851,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,5.27093042874994,2.06271086496374,0.680879211507576,0,0,0,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0,0,0.164140899745061,1.1659233465194,0.741701208042039,0,0,0,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0,0,0.209088296014469,0.436725127492355,0.944050424693745,0.991841468704031,5.23511883968059,0.388844919875379,8.69875038321696,0,0,0,0,0,0.337912250981556,0.352071715937262,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,1.58711268530648,0,0,0,1.9318959403219,0.187682475451182,7.50921659495787,0,0,2.82375921308533,2.30162618253588,5.72895513439397,4.1244763762485,4.7955776383945,1.5107877947794,2.02506750069542,4.5032120322422,1.81256963593682,2.5888015587591,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0,0,0.114870937911227,0,0.347652977834566,0,0,0,0,0,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0.467863216890817,0.429742108096597,0,0.441182838239031,0 | |phase1_expression=0,0,0.454999239389536,1.51232105653415,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.10556277196391,0,0,0.319984845586813,0.45881856213434,0.57423196411502,0,0,1.14014051673824,0.252030129759931,0.665191531965914,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0.883474163806454,0.122490799214954,0,0,0,0.638436690425939,0.768032666281217,0,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.30559649555362,0.589257170947335,0.284743361598206,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,1.54488862144927,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0.258937883647172,1.33597925158342,0,0,0,0.60289056221049,0.470354828542819,3.89566433121994,0,0.144599356919912,0,0,0.220841518460394,0,1.86391761218122,3.51336956413857,6.0739544975902,1.78819938646014,0,0,0,1.19832511523858,0.457500602818626,0,2.60736480288415,1.53429274398198,0.41557608911912,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0.187403449119458,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0.268412837520744,1.68231958851302,0.102904612379284,2.64335026387038,0,0,0.232236671860439,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0,0.898819408654221,1.08069024937347,1.7922714592893,0.189667900953082,0.114248512609729,0,0.610953983535943,0.193952487167626,0.631222379012867,1.7706230394792,4.42830443938806,6.12295038581362,5.42947521255922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,3.44234991113325,0.827810238914197,0.80275294993896,0.35163505977661,0,0,0.631016438832513,0,0.646270193198397,0,0,0,0,0.876767573733936,1.18586333383957,0.642642632843614,0.141940085208269,0.178065603667255,0,0.494910368917606,5.30980553359851,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,5.27093042874994,2.06271086496374,0.680879211507576,0,0,0,0.177340233642274,0.356737635204141,0,0,0,0,0,0,0,0,0,0.164140899745061,1.1659233465194,0.741701208042039,0,0,0,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0,0,0.209088296014469,0.436725127492355,0.944050424693745,0.991841468704031,5.23511883968059,0.388844919875379,8.69875038321696,0,0,0,0,0,0.337912250981556,0.352071715937262,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,1.58711268530648,0,0,0,1.9318959403219,0.187682475451182,7.50921659495787,0,0,2.82375921308533,2.30162618253588,5.72895513439397,4.1244763762485,4.7955776383945,1.5107877947794,2.02506750069542,4.5032120322422,1.81256963593682,2.5888015587591,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0,0,0.114870937911227,0,0.347652977834566,0,0,0,0,0,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.271608227691724,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0,0.467863216890817,0.429742108096597,0,0.441182838239031,0 | ||
|short_description=p3@Mfsd4 | |short_description=p3@Mfsd4 | ||
}} | }} |
Latest revision as of 08:54, 26 September 2015
Short description: | p3@Mfsd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mfsd4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000126927, ENSMUST00000159038_5end |
EntrezGene: | Mfsd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.35e-20 | 10 |
visual cortex | 3.35e-20 | 10 |
neocortex | 3.35e-20 | 10 |
regional part of cerebral cortex | 3.05e-13 | 17 |
cerebral cortex | 2.48e-12 | 21 |
cerebral hemisphere | 2.48e-12 | 21 |
pallium | 2.48e-12 | 21 |
adult organism | 1.73e-10 | 51 |
brain grey matter | 3.46e-08 | 29 |
regional part of telencephalon | 3.46e-08 | 29 |
telencephalon | 3.46e-08 | 29 |
regional part of brain | 3.90e-07 | 46 |
brain | 6.51e-07 | 47 |
future brain | 6.51e-07 | 47 |