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FFCP PHASE1:Mm9::chr2:102241020..102241127,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=80985
|EntrezGene=80985
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q4KMS1,Q9QXA7
|UniProt=Q4KMS1,Q9QXA7
|association_with_transcript=0bp_to_ENSMUST00000102573,NM_020267,uc008lhv.1_5end
|association_with_transcript=0bp_to_ENSMUST00000102573,NM_020267,uc008lhv.1_5end
|cluster_id=chr2:102241020..102241127,-
|description=CAGE_peak_1_at_Trim44_5end
|description=CAGE_peak_1_at_Trim44_5end
|id=chr2:102241020..102241127,-
|id=chr2:102241020..102241127,-
|ontology_enrichment_celltype=CL:0000117!1.86e-07!23;CL:0000337!1.86e-07!23
|ontology_enrichment_celltype=CL:0000117!1.86e-07!23;CL:0000337!1.86e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.86e-07,23;CL:0000337,1.86e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.94e-18!63;UBERON:0003056!7.94e-16!49;UBERON:0001049!8.30e-16!52;UBERON:0005068!8.30e-16!52;UBERON:0006241!8.30e-16!52;UBERON:0007135!8.30e-16!52;UBERON:0000955!1.95e-15!50;UBERON:0006238!1.95e-15!50;UBERON:0002346!3.13e-15!71;UBERON:0003075!3.13e-15!71;UBERON:0007284!3.13e-15!71;UBERON:0002616!9.00e-15!49;UBERON:0004121!1.00e-13!102;UBERON:0000924!1.00e-13!102;UBERON:0006601!1.00e-13!102;UBERON:0001017!1.54e-13!73;UBERON:0005743!1.54e-13!73;UBERON:0000073!1.24e-12!75;UBERON:0001016!1.24e-12!75;UBERON:0003080!1.26e-12!40;UBERON:0000153!2.24e-12!94;UBERON:0002780!5.10e-12!39;UBERON:0001890!5.10e-12!39;UBERON:0006240!5.10e-12!39;UBERON:0007811!5.53e-12!86;UBERON:0002020!1.31e-11!34;UBERON:0002791!1.17e-09!29;UBERON:0003528!1.17e-09!29;UBERON:0001893!1.17e-09!29;UBERON:0000468!2.63e-09!333;UBERON:0000475!2.51e-08!200;UBERON:0002021!1.21e-07!10;UBERON:0000411!1.21e-07!10;UBERON:0001950!1.21e-07!10;UBERON:0000922!2.61e-07!328
|ontology_enrichment_uberon=UBERON:0000033!1.94e-18!63;UBERON:0003056!7.94e-16!49;UBERON:0001049!8.30e-16!52;UBERON:0005068!8.30e-16!52;UBERON:0006241!8.30e-16!52;UBERON:0007135!8.30e-16!52;UBERON:0000955!1.95e-15!50;UBERON:0006238!1.95e-15!50;UBERON:0002346!3.13e-15!71;UBERON:0003075!3.13e-15!71;UBERON:0007284!3.13e-15!71;UBERON:0002616!9.00e-15!49;UBERON:0004121!1.00e-13!102;UBERON:0000924!1.00e-13!102;UBERON:0006601!1.00e-13!102;UBERON:0001017!1.54e-13!73;UBERON:0005743!1.54e-13!73;UBERON:0000073!1.24e-12!75;UBERON:0001016!1.24e-12!75;UBERON:0003080!1.26e-12!40;UBERON:0000153!2.24e-12!94;UBERON:0002780!5.10e-12!39;UBERON:0001890!5.10e-12!39;UBERON:0006240!5.10e-12!39;UBERON:0007811!5.53e-12!86;UBERON:0002020!1.31e-11!34;UBERON:0002791!1.17e-09!29;UBERON:0003528!1.17e-09!29;UBERON:0001893!1.17e-09!29;UBERON:0000468!2.63e-09!333;UBERON:0000475!2.51e-08!200;UBERON:0002021!1.21e-07!10;UBERON:0000411!1.21e-07!10;UBERON:0001950!1.21e-07!10;UBERON:0000922!2.61e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.45e-17,64;UBERON:0003075,1.45e-17,64;UBERON:0007284,1.45e-17,64;UBERON:0010371,6.63e-17,73;UBERON:0000073,7.04e-17,54;UBERON:0003056,7.93e-16,49;UBERON:0001049,8.29e-16,52;UBERON:0005068,8.29e-16,52;UBERON:0006241,8.29e-16,52;UBERON:0007135,8.29e-16,52;UBERON:0004121,2.89e-15,95;UBERON:0000924,2.89e-15,95;UBERON:0006601,2.89e-15,95;UBERON:0000955,8.55e-14,47;UBERON:0006238,8.55e-14,47;UBERON:0001017,1.48e-13,73;UBERON:0002616,3.78e-13,46;UBERON:0010314,9.43e-13,92;UBERON:0001016,1.19e-12,75;UBERON:0003080,1.26e-12,40;UBERON:0002780,5.10e-12,39;UBERON:0001890,5.10e-12,39;UBERON:0006240,5.10e-12,39;UBERON:0002020,1.31e-11,34;UBERON:0003528,1.17e-09,29;UBERON:0002791,1.17e-09,29;UBERON:0001893,1.17e-09,29;UBERON:0002021,1.21e-07,10;UBERON:0000411,1.21e-07,10;UBERON:0001950,1.21e-07,10
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31864,13.538478952263,13.8910276776365,21.655205400038,13.3495530411855,9.59150802359267,20.5041973318685,41.1495845239459,21.6798991763769,17.2076830075382,21.9729842828774,20.1489324625261,18.7541299294764,18.4250864673834,28.9053734353569,25.4808206954477,35.5128657614229,36.8678408010068,12.9564559457553,14.798940716182,14.1741120887462,15.4605779343576,15.2172691317359,15.8945083825012,13.7022812452764,17.131985152251,17.5681622909777,19.127908470405,16.2330158070313,19.5890340286902,17.8954025451013,19.7521964686852,14.964205318604,5.99362074109975,2.24284641523689,3.69346156000973,21.4440449375731,17.0791052660576,17.3994043053902,13.9339446401393,18.5581678493084,66.6407174288139,54.778703144354,61.8727154514548,51.72780788545,68.5082519770642,67.985450765073,58.0519350199353,58.5417564191487,53.9239466691203,69.3798817747439,29.6831814090745,35.9122386060928,22.7075695652998,25.7693120092392,29.3458427679175,24.8188736407519,25.1138802415825,25.5483470976229,27.5990520248961,26.0278128116711,24.334012789463,30.3688409631583,28.654301285784,31.2442743735762,32.0489916772322,25.2435656380029,34.5335291315669,31.8300213765113,27.1976694530182,21.7854401798908,15.4291163573437,25.2015644746259,22.8898742349428,25.1449300773928,29.4562360699985,26.6536014858781,27.0733399851703,24.7285528751572,30.6917297291648,15.7119836064167,29.5401195129194,32.6049836663115,28.6461730218783,28.9731893017756,22.7629800957747,22.4829520144151,19.8841867178597,23.2060738372162,20.6591398634351,17.2061306913222,16.6944841646703
|phase1_expression=25.4636666896622,0.348975407639361,3.18499467572675,0.90739263392049,1.50268718983904,5.20425742926858,4.67225281191051,6.19791952519566,16.1907030474417,14.5120006319636,9.93064215707929,10.9287857823611,10.1008430659411,4.98296293788285,4.66353666541928,7.89653542820321,6.29605690315332,9.62159604342625,12.4774134581222,11.0341309467488,30.1053247134787,7.74469419366905,4.96279599363977,3.03985603307473,1.37645568640302,1.72269589234506,0.86152399231815,3.23206849028834,2.47030445293286,2.52030129759931,1.55211357458713,7.62036808151557,4.30545351309199,15.8481681015439,6.35473563452804,6.31691652362271,6.94175811292055,1.67412652294763,0,0.523523743973798,0.588231488031014,0,0.971020706062307,0.881277725829041,0.608261587317087,1.83546752161682,5.47673941043627,4.36050312760893,9.22681967484782,7.77719596297134,6.57936181639204,0,10.7380867876951,8.70434570413613,12.0993767691287,8.2323019531503,6.87680255853016,8.25075347643908,37.6308617198852,48.667170093027,29.1562445612842,4.06613438482959,2.66788438833342,3.5995988691256,0.988866362566974,1.4209602298922,4.19440154725767,3.84218305321555,23.6412316063329,15.6606888464761,14.302097371894,27.1368435183613,28.0503047008549,22.4158162563366,21.086003624012,17.4651569455904,42.9451935897616,54.6501807004603,56.5272042382976,44.3137926773451,44.6459700779759,48.4449434617787,40.4815348552002,43.3327209724394,48.284246297472,43.8996592355765,46.6979113021058,52.5646437227348,9.99585751998029,12.6204505378332,10.7249860819621,4.30211938490693,3.39985666853875,11.873470216032,11.695975514058,11.6486990645307,13.0613310722529,7.49893419343454,3.11743205523443,3.88673531961374,20.9856695467254,12.8326477414318,20.3844191765317,28.4426681261332,6.061749148314,10.1343946190039,10.1104889002957,18.2694207550496,25.3759125974228,16.7739617143252,14.7462527751215,14.0054120023585,16.1430848079241,13.4143150091834,17.52071736322,16.4623234641875,21.5059621928905,30.5104643101014,17.6922110389975,24.2650274921114,12.8088080707028,14.0613823409214,0,56.2139130262171,62.8340120440365,6.38642638021478,9.22576458695586,4.79922184794726,5.46401976414178,64.7095562228834,53.5275705297793,52.9004822395159,68.6606064759492,93.591857382901,66.2843862144997,66.1944353316451,25.6635196902797,16.7949410323626,24.5141075680664,36.1959992124735,26.4144499214289,20.4612872945791,31.8709969755468,32.5522406525144,44.4278339458171,42.661868854855,38.6051105186083,40.0990224645474,14.2274875335676,24.3946843416487,27.448375369576,18.1932457914887,25.0242524303038,17.7608604926305,20.3724315043864,21.0976322827603,3.51106593656617,2.57347907114715,5.11494298912067,22.7838349789052,18.2930326785255,20.5270750065557,23.9112182941062,20.6602443334774,21.7516629171203,18.3701816352822,17.9743178937745,22.769241761598,21.3927804887525,14.9392392311977,20.0239959578264,17.2515985161892,14.9294078397914,14.2258803885994,63.2972745178023,43.7344602611959,4.95628174475697,3.17340679996253,22.3952663061996,21.3657738111603,22.8095406540105,17.3447831176075,12.8979265430025,12.3646656973163,9.96511029243474,10.8701310117847,17.3421294072186,16.7123436514567,16.7669114922443,5.39291645192533,6.48414149624083,8.76221602319216,15.5527678781527,22.9639510345555,18.0332377076929,24.4381593414377,24.2440608959532,30.0181309130563,34.90656849259,41.6260617302478,35.6387112199921,33.5640285867297,5.92905254174298,12.5133829287071,9.43483176543374,11.9176919563972,9.73728582664814,7.95884627182976,9.67578236769395,11.2201493605816,13.2950885955529,10.4333337011471,27.3159592401974,18.2349064357567,20.9065240986756,17.4279425783507,17.9397413521912,18.8152973331713,20.8771104888263,15.7277871769502,17.9261474086228,17.9929790921699,13.6120344007331,18.9282070909252,15.9489239393629,26.7333097565184,24.5910824805658,20.5962161373361,28.5424035896902,21.7938208571932,18.9953480052485,25.0242871346015,3.01582567878545,4.89515115436839,12.7858710984949,16.0043312856745,52.6605935159958,62.3566172670521,6.72133276044369,13.1284882146274,11.9893123378178,12.4940398174924,15.5104846367615,16.010909462821,18.0466926006739,26.3261173633614,14.5731852602962,16.0740721851222,15.0209355619679,83.5435422696698,20.8651925256155,17.6284947630583,20.8495307972577,20.1263550026493,45.1333470355874,19.9080121647085,19.0463840887793,20.5579536933929,30.7113968596004,28.8989039067292,29.7192537143454,34.535704300363,33.5107535681638,34.7640433729398,27.4088382294997,44.3482835967203,31.3204437293485,27.3692862927592,20.4386720376752,24.0057479235383,33.3399639247474,30.1443301747499,27.15058839935,17.3545020995322,7.04015124191131,15.2519091021951,16.7601582521771,38.0887244294819,21.4747687505554,22.3760951483458,15.6377770644109,16.9065126737413,9.32738677215522,58.9652460393421,10.423123728669,14.6534676253888,12.0376442790313,10.360265135258,14.7629765938707,10.066239621087,15.6380155594347,14.4149995893368,13.4053974590291,6.68269432610579,21.3526795667266,20.5352661798117,19.6569720295678,17.1452402731864,13.538478952263,13.8910276776365,21.655205400038,13.3495530411855,9.59150802359267,20.5041973318685,41.1495845239459,21.6798991763769,17.2076830075382,21.9729842828774,20.1489324625261,18.7541299294764,18.4250864673834,28.9053734353569,25.4808206954477,35.5128657614229,36.8678408010068,12.9564559457553,14.798940716182,14.1741120887462,15.4605779343576,15.2172691317359,15.8945083825012,13.7022812452764,17.131985152251,17.5681622909777,19.127908470405,16.2330158070313,19.5890340286902,17.8954025451013,19.7521964686852,14.964205318604,5.99362074109975,2.24284641523689,3.69346156000973,21.4440449375731,17.0791052660576,17.3994043053902,13.9339446401393,18.5581678493084,66.6407174288139,54.778703144354,61.8727154514548,51.72780788545,68.5082519770642,67.985450765073,58.0519350199353,58.5417564191487,53.9239466691203,69.3798817747439,29.6831814090745,35.9122386060928,22.7075695652998,25.7693120092392,29.3458427679175,24.8188736407519,25.1138802415825,25.5483470976229,27.5990520248961,26.0278128116711,24.334012789463,30.3688409631583,28.654301285784,31.2442743735762,32.0489916772322,25.2435656380029,34.5335291315669,31.8300213765113,27.1976694530182,21.7854401798908,15.4291163573437,25.2015644746259,22.8898742349428,25.1449300773928,29.4562360699985,26.6536014858781,27.0733399851703,24.7285528751572,30.6917297291648,15.7119836064167,29.5401195129194,32.6049836663115,28.6461730218783,28.9731893017756,22.7629800957747,22.4829520144151,19.8841867178597,23.2060738372162,20.6591398634351,17.2061306913222,16.6944841646703
|short_description=p1@Trim44
|short_description=p1@Trim44
}}
}}

Latest revision as of 21:10, 1 October 2015

Short description:p1@Trim44
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim44_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000102573, NM_020267, uc008lhv.1_5end
EntrezGene:Trim44
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trim44

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G725.46
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.93
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.10
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.98
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.90
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.62
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.03
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A330.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I37.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.74
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.23
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C337.63
Mouse Granule cells, donor2.CNhs12357.11731-123E348.67
Mouse Granule cells, donor3.CNhs12108.11636-122C729.16
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D523.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.66
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.05
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.42
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F354.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D756.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D444.31
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F444.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D848.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E440.48
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I648.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D643.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F646.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E152.56
Mouse Schwann, donor1.CNhs12507.11728-123D910.00
Mouse Schwann, donor2.CNhs12573.11746-123F912.62
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.72
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.87
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.27
accessory axillary lymph node, adult.CNhs10475.1063-29H925.38
adrenal gland, adult.CNhs10508.49-24D716.77
adrenal gland, embryo E14.CNhs11038.406-44C514.75
adrenal gland, embryo E16.CNhs11004.1254-43D614.01
adrenal gland, embryo E17.CNhs11043.1263-45I116.14
adrenal gland, embryo E18.CNhs11026.1262-18F513.41
adrenal gland, neonate N00.CNhs11191.1311-23C117.52
adrenal gland, neonate N25.CNhs11223.1377-27I316.46
amnion, adult pregnant day17.5.CNhs10488.583-22A821.51
aorta, adult.CNhs10498.46-23H130.51
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F524.27
bone (os femoris), neonate N16.CNhs11225.1525-43A612.81
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B256.21
cerebellum, neonate N30.CNhs11135.1395-42I262.83
colon, adult.CNhs10468.36-18H76.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.23
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.46
corpora quadrigemina, adult.CNhs10501.16-22A464.71
corpus striatum, adult.CNhs10487.19-21D853.53
corpus striatum, neonate N00.CNhs11226.630-43F152.90
cortex, adult.CNhs10473.12-14D568.66
cortex, neonate N30.CNhs11107.1392-42F293.59
diencephalon, adult.CNhs10482.20-12F266.28
diencephalon, neonate N30.CNhs11201.1388-42B266.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.79
epididymis, adult.CNhs10490.58-23B224.51
eyeball, adult.CNhs10484.31-12G436.20
eyeball, embryo E12.CNhs11016.345-16C626.41
eyeball, embryo E14.CNhs10521.399-16E220.46
eyeball, embryo E15.CNhs10593.426-16C931.87
eyeball, embryo E17.CNhs11023.1261-18D432.55
eyeball, neonate N00.CNhs11207.633-15C644.43
eyeball, neonate N01.CNhs11140.1532-43E742.66
eyeball, neonate N02.CNhs11205.1551-44G838.61
eyeball, neonate N16.CNhs11188.777-19A240.10
forelimb, embryo E11.CNhs10596.335-25E214.23
forelimb, embryo E12.CNhs10600.359-14H224.39
forelimb, embryo E13.CNhs10589.384-1E227.45
forelimb, embryo E14.CNhs10577.413-26A818.19
forelimb, embryo E15.CNhs11007.437-20E725.02
forelimb, embryo E17.CNhs10598.1517-43C417.76
forelimb, embryo E18.CNhs11008.1520-43B520.37
gonad, embryo E13.CNhs11044.1564-45I621.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E922.78
heart, embryo E12.CNhs11015.353-12F518.29
heart, embryo E13.CNhs11013.376-3I920.53
heart, embryo E14.CNhs10597.403-26D423.91
heart, embryo E15.CNhs11017.431-16C820.66
heart, embryo E16.CNhs11021.457-17C621.75
heart, embryo E17.CNhs11025.479-18E518.37
heart, embryo E18.CNhs11030.1283-20G317.97
heart, neonate N00.CNhs11213.639-21E322.77
heart, neonate N03.CNhs11221.1349-25I221.39
heart, neonate N10.CNhs11118.749-24G114.94
heart, neonate N16.CNhs11209.782-15G120.02
heart, neonate N20.CNhs11127.821-26I617.25
heart, neonate N25.CNhs11196.1351-25D314.93
heart, neonate N30.CNhs11202.1390-42D214.23
hippocampus, adult.CNhs10478.13-16E863.30
hippocampus, neonate N00.CNhs11228.627-43G143.73
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I522.40
intestine, embryo E13.CNhs11010.381-16D521.37
intestine, embryo E15.CNhs10602.976-16D822.81
intestine, embryo E16.CNhs10585.463-22H417.34
intestine, embryo E17.CNhs10582.482-18D312.90
intestine, embryo E18.CNhs10526.1289-20F712.36
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E910.87
intestine, neonate N06.CNhs11102.688-20B817.34
intestine, neonate N07.CNhs11095.720-20F216.71
intestine, neonate N10.CNhs11098.755-23A516.77
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G18.76
kidney, embryo E14.CNhs10606.411-4I915.55
kidney, embryo E15.CNhs10997.434-16F822.96
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I224.44
kidney, embryo E18.CNhs11001.1288-20C724.24
kidney, neonate N00.CNhs11214.646-21G730.02
kidney, neonate N10.CNhs11206.758-6D534.91
kidney, neonate N20.CNhs11113.832-19I141.63
kidney, neonate N25.CNhs11122.1353-25F335.64
kidney, neonate N30.CNhs11203.1385-42H133.56
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F812.51
liver, embryo E13.CNhs10524.378-3H69.43
liver, embryo E14.CNhs10594.409-16E111.92
liver, embryo E15.CNhs10520.433-16D79.74
liver, embryo E16.CNhs10523.462-17F57.96
liver, embryo E17.CNhs10510.481-18A39.68
liver, embryo E18.CNhs10579.499-43G411.22
liver, neonate N00.CNhs11117.641-24F413.30
liver, neonate N03.CNhs11123.1345-25G210.43
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H218.23
liver, neonate N10.CNhs11115.751-24B920.91
liver, neonate N20.CNhs11220.823-25A317.43
liver, neonate N25.CNhs11198.1368-26H117.94
liver, neonate N30.CNhs11106.1382-42D118.82
lung, adult.CNhs10474.28-22B120.88
lung, embryo E12.CNhs10522.354-16G215.73
lung, embryo E14.CNhs10604.404-26F817.93
lung, embryo E15.CNhs11020.432-17C517.99
lung, embryo E16.CNhs10998.458-17B613.61
lung, embryo E17.CNhs10605.480-44A618.93
lung, embryo E18.CNhs10583.1287-20I615.95
lung, neonate N00.CNhs11224.640-42C626.73
lung, neonate N06.CNhs11212.683-20E524.59
lung, neonate N07.CNhs11111.715-19A320.60
lung, neonate N10.CNhs11219.750-23E628.54
lung, neonate N20.CNhs11109.822-18A421.79
lung, neonate N25.CNhs11119.1359-25C719.00
lung, neonate N30.CNhs11133.1394-42H225.02
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H216.00
medulla oblongata, adult.CNhs10477.17-12C252.66
medulla oblongata, neonate N30.CNhs11200.1396-42A362.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.72
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.13
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.01
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.33
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.07
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.02
olfactory brain, adult.CNhs10489.18-22I983.54
ovary, adult.CNhs10507.91-2I720.87
ovary, embryo E18.CNhs11040.505-44H717.63
ovary, neonate N00.CNhs11217.1299-22I420.85
oviduct, adult pregnant day01.CNhs10500.988-6G620.13
pancreas, adult.CNhs10486.34-16E445.13
pancreas, embryo E14.CNhs11012.405-44F419.91
pancreas, embryo E15.CNhs11042.1556-45F219.05
pancreas, embryo E16.CNhs11003.460-26E520.56
pancreas, embryo E17.CNhs10599.1558-45G330.71
pancreas, embryo E18.CNhs10580.1535-43I728.90
pancreas, neonate N00.CNhs11105.645-26G929.72
pancreas, neonate N01.CNhs11138.1531-43D734.54
pancreas, neonate N02.CNhs11139.1539-43D833.51
pancreas, neonate N16.CNhs11136.787-43B634.76
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H544.35
pituitary gland, adult.CNhs10493.21-1G831.32
pituitary gland, embryo E12.CNhs11018.346-16E627.37
pituitary gland, embryo E13.CNhs11009.370-44C720.44
pituitary gland, embryo E14.CNhs11037.398-44A524.01
pituitary gland, embryo E15.CNhs10592.427-16B933.34
pituitary gland, embryo E16.CNhs11036.449-43F630.14
pituitary gland, embryo E17.CNhs11039.1265-44F527.15
pituitary gland, neonate N00.CNhs11190.1308-22E917.35
placenta, adult pregnant day10.CNhs10472.539-13I77.04
placenta, adult pregnant day17.CNhs10464.577-18G315.25
prostate, adult.CNhs10470.859-1F816.76
skin, adult.CNhs10492.30-1C338.09
skin, neonate N00.CNhs11124.650-25G421.47
skin, neonate N03.CNhs11215.662-22H322.38
skin, neonate N06.CNhs11097.693-20I515.64
skin, neonate N10.CNhs11108.762-6C416.91
small intestine, neonate N16.CNhs11114.790-21I19.33
spinal cord, adult.CNhs10505.24-13C958.97
spleen, adult.CNhs10465.25-2G210.42
spleen, embryo E16.CNhs11035.461-43C114.65
spleen, embryo E18.CNhs11011.1271-21F212.04
spleen, neonate N10.CNhs11116.752-24D110.36
spleen, neonate N20.CNhs11112.824-19H114.76
spleen, neonate N25.CNhs11099.1354-25G310.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.41
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E321.35
stomach, embryo E15.CNhs10603.1252-16G820.54
stomach, embryo E16.CNhs11022.459-17D419.66
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C613.54
stomach, neonate N03.CNhs11193.1340-24B813.89
stomach, neonate N07.CNhs11210.718-18A921.66
stomach, neonate N25.CNhs11104.1355-25E413.35
stomach, neonate N30.CNhs11134.1386-42I19.59
submandibular gland, adult.CNhs10469.59-29C120.50
testis, adult.CNhs10504.57-7G541.15
testis, embryo E13.CNhs11031.389-23F521.68
testis, embryo E15.CNhs11034.443-27C517.21
testis, embryo E16.CNhs11033.470-26G521.97
testis, embryo E17.CNhs11029.486-18I520.15
testis, embryo E18.CNhs11027.503-18G518.75
testis, neonate N00.CNhs11189.1300-22B718.43
testis, neonate N07.CNhs11222.726-26I428.91
testis, neonate N10.CNhs11204.763-44D925.48
testis, neonate N20.CNhs11110.839-18H335.51
testis, neonate N30.CNhs11130.1391-42E236.87
thymus, adult.CNhs10471.38-12B512.96
thymus, embryo E14.CNhs11041.402-44I414.80
thymus, embryo E15.CNhs11005.430-45I214.17
thymus, embryo E16.CNhs11002.456-26C515.46
thymus, embryo E17.CNhs10581.478-18C115.22
thymus, embryo E18.CNhs10595.1273-19G415.89
thymus, neonate N02.CNhs11181.1541-43F813.70
thymus, neonate N03.CNhs11137.2104-43C717.13
thymus, neonate N06.CNhs11197.681-26C417.57
thymus, neonate N07.CNhs11211.713-19D319.13
thymus, neonate N10.CNhs11194.748-24E416.23
thymus, neonate N20.CNhs11186.820-7A219.59
thymus, neonate N25.CNhs11125.1362-25G717.90
thymus, neonate N30.CNhs11132.1393-42G219.75
tongue, adult.CNhs10499.32-1B414.96
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.69
urinary bladder, adult.CNhs10481.879-12E421.44
uterus, adult pregnant day19.CNhs10497.590-15F517.08
uterus, adult.CNhs10509.92-27E517.40
vagina, adult.CNhs10502.89-27D513.93
vesicular gland, adult.CNhs10491.51-27F818.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A166.64
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A254.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A361.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D751.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A468.51
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A658.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A758.54
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A853.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A969.38
whole body, embryo E11.CNhs11014.324-5I829.68
whole body, embryo E12.CNhs10587.857-27C935.91
whole body, embryo E13.CNhs10512.372-23H222.71
whole body, embryo E14.5.CNhs10578.420-27D225.77
whole body, embryo E14.CNhs10519.395-14B129.35
whole body, embryo E16.CNhs10514.453-14F224.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G525.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G527.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.33
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G530.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G532.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G534.53
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G531.83
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.79
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G525.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.89
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G525.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G527.07
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G524.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G530.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G529.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G532.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G528.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.97
whole body, embryo E17.5.CNhs10513.490-9F922.76
whole body, embryo E17.CNhs10517.475-3I522.48
whole body, embryo E18.CNhs10516.493-3B319.88
whole body, neonate N00.CNhs10525.657-19C223.21
whole body, neonate N01.CNhs10576.659-23C620.66
whole body, neonate N06.CNhs10515.692-21D117.21
whole body, neonate N10.CNhs10518.761-6B416.69





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.86e-0723
neuroblast (sensu Vertebrata)1.86e-0723

Uber anatomy
Ontology termp-valuen
neurectoderm1.45e-1764
neural plate1.45e-1764
presumptive neural plate1.45e-1764
ecto-epithelium6.63e-1773
regional part of nervous system7.04e-1754
pre-chordal neural plate7.93e-1649
neural tube8.29e-1652
neural rod8.29e-1652
future spinal cord8.29e-1652
neural keel8.29e-1652
ectoderm-derived structure2.89e-1595
ectoderm2.89e-1595
presumptive ectoderm2.89e-1595
brain8.55e-1447
future brain8.55e-1447
central nervous system1.48e-1373
regional part of brain3.78e-1346
structure with developmental contribution from neural crest9.43e-1392
nervous system1.19e-1275
anterior neural tube1.26e-1240
regional part of forebrain5.10e-1239
forebrain5.10e-1239
future forebrain5.10e-1239
gray matter1.31e-1134
brain grey matter1.17e-0929
regional part of telencephalon1.17e-0929
telencephalon1.17e-0929
occipital lobe1.21e-0710
visual cortex1.21e-0710
neocortex1.21e-0710
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