FFCP PHASE1:Mm9::chr2:113589255..113589261,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=445 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:113589255..113589261,- | |||
|description=CAGE_peak_at_chr2:113589255..113589261,- | |description=CAGE_peak_at_chr2:113589255..113589261,- | ||
|id=chr2:113589255..113589261,- | |id=chr2:113589255..113589261,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.31e-17,3;CL:0000359,1.31e-17,3;CL:0002539,1.31e-17,3;CL:0000514,1.31e-17,3;CL:0000680,2.61e-09,6;CL:0000187,2.61e-09,6;CL:0000056,2.61e-09,6;CL:0000222,4.11e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.83e-10!59;UBERON:0000160!7.99e-08!43 | |ontology_enrichment_uberon=UBERON:0005409!2.83e-10!59;UBERON:0000160!7.99e-08!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.31e-17,3;UBERON:0004237,1.31e-17,3;UBERON:0004695,1.31e-17,3;UBERON:0002111,1.31e-17,3;UBERON:0004178,1.31e-17,3;UBERON:0000947,1.80e-13,4;UBERON:0001637,1.80e-13,4;UBERON:0004573,1.80e-13,4;UBERON:0003509,1.80e-13,4;UBERON:0004571,1.80e-13,4;UBERON:0010191,1.80e-13,4;UBERON:0004572,1.80e-13,4;UBERON:0000055,5.59e-11,5;UBERON:0007500,5.59e-11,5;UBERON:0001981,5.59e-11,5;UBERON:0002049,5.59e-11,5;UBERON:0007798,5.59e-11,5;UBERON:0004537,5.59e-11,5;UBERON:0006965,5.59e-11,5;UBERON:0000160,2.13e-10,31;UBERON:0005409,6.11e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,1.01376931219515,6.05704282133549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0.776110112217047,0.862271971731369,0,0,0,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.264450566663544,0,0.696710015581316,0,0.201683524623343,0.22237804384487,0.760902504450237,0.474529061544512,0.494096864172033,1.75934646160189,0.397912944082302,0.58489226135736,1.79763881730844,1.29682829924817,1.39398891278057,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,1.1659233465194,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.627264888043406,0,0.269728692769641,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,1.01376931219515,6.05704282133549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0.776110112217047,0.862271971731369,0,0,0,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0.264450566663544,0,0.696710015581316,0,0.201683524623343,0.22237804384487,0.760902504450237,0.474529061544512,0.494096864172033,1.75934646160189,0.397912944082302,0.58489226135736,1.79763881730844,1.29682829924817,1.39398891278057,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,1.1659233465194,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.627264888043406,0,0.269728692769641,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:113589255..113589261,- | |short_description=p@chr2:113589255..113589261,- | ||
}} | }} |
Latest revision as of 09:27, 6 August 2015
Short description: | p@chr2:113589255..113589261, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:113589255..113589261, - |
Coexpression cluster: | MCL_coexpression_mm9:445 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.31e-17 | 3 |
vascular associated smooth muscle cell | 1.31e-17 | 3 |
aortic smooth muscle cell | 1.31e-17 | 3 |
smooth muscle myoblast | 1.31e-17 | 3 |
muscle precursor cell | 2.61e-09 | 6 |
muscle cell | 2.61e-09 | 6 |
myoblast | 2.61e-09 | 6 |
mesodermal cell | 4.11e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.31e-17 | 3 |
blood vessel smooth muscle | 1.31e-17 | 3 |
arterial system smooth muscle | 1.31e-17 | 3 |
artery smooth muscle tissue | 1.31e-17 | 3 |
aorta smooth muscle tissue | 1.31e-17 | 3 |
aorta | 1.80e-13 | 4 |
artery | 1.80e-13 | 4 |
systemic artery | 1.80e-13 | 4 |
arterial blood vessel | 1.80e-13 | 4 |
systemic arterial system | 1.80e-13 | 4 |
aortic system | 1.80e-13 | 4 |
arterial system | 1.80e-13 | 4 |
vessel | 5.59e-11 | 5 |
epithelial tube open at both ends | 5.59e-11 | 5 |
blood vessel | 5.59e-11 | 5 |
vasculature | 5.59e-11 | 5 |
vascular system | 5.59e-11 | 5 |
blood vasculature | 5.59e-11 | 5 |
vascular cord | 5.59e-11 | 5 |
intestine | 2.13e-10 | 31 |
gastrointestinal system | 6.11e-07 | 47 |