FFCP PHASE1:Mm9::chrX:156380821..156380834,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58194 | |EntrezGene=58194 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENSMUST00000142426_5end | |association_with_transcript=-9bp_to_ENSMUST00000142426_5end | ||
|cluster_id=chrX:156380821..156380834,+ | |||
|description=CAGE_peak_17_at_Sh3kbp1_5end | |description=CAGE_peak_17_at_Sh3kbp1_5end | ||
|id=chrX:156380821..156380834,+ | |id=chrX:156380821..156380834,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.40e-20!18;UBERON:0000948!1.40e-20!18;UBERON:0005498!1.40e-20!18;UBERON:0004140!1.40e-20!18;UBERON:0009881!1.40e-20!18;UBERON:0004141!1.40e-20!18;UBERON:0003084!1.40e-20!18;UBERON:0007005!1.40e-20!18;UBERON:0004139!1.40e-20!18;UBERON:0004291!1.40e-20!18;UBERON:0004535!6.32e-15!23;UBERON:0001009!6.32e-15!23;UBERON:0004872!4.34e-10!33;UBERON:0003103!2.02e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.15e-65,18;UBERON:0000948,2.15e-65,18;UBERON:0005498,2.15e-65,18;UBERON:0004140,2.15e-65,18;UBERON:0009881,2.15e-65,18;UBERON:0004141,2.15e-65,18;UBERON:0003084,2.15e-65,18;UBERON:0007005,2.15e-65,18;UBERON:0004139,2.15e-65,18;UBERON:0004291,2.15e-65,18;UBERON:0004535,1.02e-50,23;UBERON:0001009,1.02e-50,23;UBERON:0004872,1.10e-34,33;UBERON:0003103,1.73e-29,43;UBERON:0003914,1.13e-23,47;UBERON:0003081,2.35e-13,87;UBERON:0010314,1.79e-12,92;UBERON:0000926,5.76e-09,120;UBERON:0004120,5.76e-09,120;UBERON:0006603,5.76e-09,120;UBERON:0004111,9.22e-09,122;UBERON:0000025,2.60e-08,114;UBERON:0001048,9.52e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0.696504333044333,0,0.199034266818493,0,0,0,6.42089894860056,6.3322036194896,9.18316513451176,9.46978942340841,16.7249596985293,18.6663206593728,21.8581908065383,21.7301455133692,19.4998121753173,23.6966183875412,13.9542344467231,13.1331471464286,9.35679919522127,8.56245449635098,3.89198614405078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.651859905768103,0,0,0.670025029767263,0.476087281772027,0.390267295715598,0.472905432318573,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0.39736270956253,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.618105171716683,0.320919209591815,0,0.25347929989024,0.754505365544305,0.468207537349412,0.448176066834085,0.631790158511746,0.952587382566147,0.811190281613988,1.15745532278223,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0,0.436039249896986,0.282328141245992,0.423073039458382,0.182927972872773,0.789209134313529,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0.578719832943424,0,0.233931608445408,0,0,0.441182838239031,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0.696504333044333,0,0.199034266818493,0,0,0,6.42089894860056,6.3322036194896,9.18316513451176,9.46978942340841,16.7249596985293,18.6663206593728,21.8581908065383,21.7301455133692,19.4998121753173,23.6966183875412,13.9542344467231,13.1331471464286,9.35679919522127,8.56245449635098,3.89198614405078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.651859905768103,0,0,0.670025029767263,0.476087281772027,0.390267295715598,0.472905432318573,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0,0,0,0.39736270956253,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.618105171716683,0.320919209591815,0,0.25347929989024,0.754505365544305,0.468207537349412,0.448176066834085,0.631790158511746,0.952587382566147,0.811190281613988,1.15745532278223,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0,0.436039249896986,0.282328141245992,0.423073039458382,0.182927972872773,0.789209134313529,0.407412341537585,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0.578719832943424,0,0.233931608445408,0,0,0.441182838239031,0.695603506861264 | ||
|short_description=p17@Sh3kbp1 | |short_description=p17@Sh3kbp1 | ||
}} | }} |
Latest revision as of 17:37, 1 October 2015
Short description: | p17@Sh3kbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Sh3kbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -9bp_to_ENSMUST00000142426_5end |
EntrezGene: | Sh3kbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.15e-65 | 18 |
heart | 2.15e-65 | 18 |
primitive heart tube | 2.15e-65 | 18 |
primary heart field | 2.15e-65 | 18 |
anterior lateral plate mesoderm | 2.15e-65 | 18 |
heart tube | 2.15e-65 | 18 |
heart primordium | 2.15e-65 | 18 |
cardiac mesoderm | 2.15e-65 | 18 |
cardiogenic plate | 2.15e-65 | 18 |
heart rudiment | 2.15e-65 | 18 |
cardiovascular system | 1.02e-50 | 23 |
circulatory system | 1.02e-50 | 23 |
splanchnic layer of lateral plate mesoderm | 1.10e-34 | 33 |
compound organ | 1.73e-29 | 43 |
epithelial tube | 1.13e-23 | 47 |
lateral plate mesoderm | 2.35e-13 | 87 |
structure with developmental contribution from neural crest | 1.79e-12 | 92 |
mesoderm | 5.76e-09 | 120 |
mesoderm-derived structure | 5.76e-09 | 120 |
presumptive mesoderm | 5.76e-09 | 120 |
anatomical conduit | 9.22e-09 | 122 |
tube | 2.60e-08 | 114 |
primordium | 9.52e-08 | 134 |