FFCP PHASE1:Mm9::chr2:168032375..168032388,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11538 | |EntrezGene=11538 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2BDX0 | |UniProt=A2BDX0 | ||
|association_with_transcript=33bp_to_ENSMUST00000057793_5end | |association_with_transcript=33bp_to_ENSMUST00000057793_5end | ||
|cluster_id=chr2:168032375..168032388,- | |||
|description=CAGE_peak_4_at_Adnp_5end | |description=CAGE_peak_4_at_Adnp_5end | ||
|id=chr2:168032375..168032388,- | |id=chr2:168032375..168032388,- | ||
|ontology_enrichment_celltype=CL:0000540!1.11e-13!33;CL:0000047!1.11e-13!33;CL:0000031!1.11e-13!33;CL:0000404!1.11e-13!33;CL:0000117!3.82e-10!23;CL:0000337!3.82e-10!23;CL:0000393!3.99e-10!39;CL:0000211!3.99e-10!39;CL:0002319!6.86e-08!43;CL:0000221!7.88e-08!44;CL:0000133!7.88e-08!44 | |ontology_enrichment_celltype=CL:0000540!1.11e-13!33;CL:0000047!1.11e-13!33;CL:0000031!1.11e-13!33;CL:0000404!1.11e-13!33;CL:0000117!3.82e-10!23;CL:0000337!3.82e-10!23;CL:0000393!3.99e-10!39;CL:0000211!3.99e-10!39;CL:0002319!6.86e-08!43;CL:0000221!7.88e-08!44;CL:0000133!7.88e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.38e-14,33;CL:0000047,4.38e-14,33;CL:0000031,4.38e-14,33;CL:0000404,4.38e-14,33;CL:0000117,1.97e-10,23;CL:0000337,1.97e-10,23;CL:0000393,2.19e-10,39;CL:0000211,2.19e-10,39;CL:0002319,3.49e-08,43;CL:0000221,4.04e-08,44;CL:0000133,4.04e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.05e-17!73;UBERON:0005743!7.05e-17!73;UBERON:0000073!3.13e-16!75;UBERON:0001016!3.13e-16!75;UBERON:0004121!2.51e-13!102;UBERON:0000924!2.51e-13!102;UBERON:0006601!2.51e-13!102;UBERON:0001049!2.11e-12!52;UBERON:0005068!2.11e-12!52;UBERON:0006241!2.11e-12!52;UBERON:0007135!2.11e-12!52;UBERON:0000955!3.31e-12!50;UBERON:0006238!3.31e-12!50;UBERON:0000153!3.67e-12!94;UBERON:0002020!4.38e-12!34;UBERON:0002616!8.94e-12!49;UBERON:0002346!1.58e-11!71;UBERON:0003075!1.58e-11!71;UBERON:0007284!1.58e-11!71;UBERON:0000033!6.39e-11!63;UBERON:0003080!6.97e-11!40;UBERON:0003056!7.52e-11!49;UBERON:0007811!1.63e-10!86;UBERON:0002791!2.00e-10!29;UBERON:0003528!2.00e-10!29;UBERON:0001893!2.00e-10!29;UBERON:0002780!2.39e-10!39;UBERON:0001890!2.39e-10!39;UBERON:0006240!2.39e-10!39;UBERON:0000956!2.48e-07!21;UBERON:0001869!2.48e-07!21;UBERON:0000203!2.48e-07!21 | |ontology_enrichment_uberon=UBERON:0001017!7.05e-17!73;UBERON:0005743!7.05e-17!73;UBERON:0000073!3.13e-16!75;UBERON:0001016!3.13e-16!75;UBERON:0004121!2.51e-13!102;UBERON:0000924!2.51e-13!102;UBERON:0006601!2.51e-13!102;UBERON:0001049!2.11e-12!52;UBERON:0005068!2.11e-12!52;UBERON:0006241!2.11e-12!52;UBERON:0007135!2.11e-12!52;UBERON:0000955!3.31e-12!50;UBERON:0006238!3.31e-12!50;UBERON:0000153!3.67e-12!94;UBERON:0002020!4.38e-12!34;UBERON:0002616!8.94e-12!49;UBERON:0002346!1.58e-11!71;UBERON:0003075!1.58e-11!71;UBERON:0007284!1.58e-11!71;UBERON:0000033!6.39e-11!63;UBERON:0003080!6.97e-11!40;UBERON:0003056!7.52e-11!49;UBERON:0007811!1.63e-10!86;UBERON:0002791!2.00e-10!29;UBERON:0003528!2.00e-10!29;UBERON:0001893!2.00e-10!29;UBERON:0002780!2.39e-10!39;UBERON:0001890!2.39e-10!39;UBERON:0006240!2.39e-10!39;UBERON:0000956!2.48e-07!21;UBERON:0001869!2.48e-07!21;UBERON:0000203!2.48e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.70e-17,73;UBERON:0001016,9.28e-17,75;UBERON:0004121,2.47e-15,95;UBERON:0000924,2.47e-15,95;UBERON:0006601,2.47e-15,95;UBERON:0010371,5.94e-14,73;UBERON:0000073,7.57e-14,54;UBERON:0002346,8.51e-14,64;UBERON:0003075,8.51e-14,64;UBERON:0007284,8.51e-14,64;UBERON:0001049,1.00e-12,52;UBERON:0005068,1.00e-12,52;UBERON:0006241,1.00e-12,52;UBERON:0007135,1.00e-12,52;UBERON:0002020,3.86e-12,34;UBERON:0000955,4.49e-11,47;UBERON:0006238,4.49e-11,47;UBERON:0003080,6.20e-11,40;UBERON:0003056,6.54e-11,49;UBERON:0002616,1.21e-10,46;UBERON:0003528,1.99e-10,29;UBERON:0002791,1.99e-10,29;UBERON:0001893,1.99e-10,29;UBERON:0002780,2.19e-10,39;UBERON:0001890,2.19e-10,39;UBERON:0006240,2.19e-10,39;UBERON:0010314,2.25e-08,92;UBERON:0000956,3.00e-07,21;UBERON:0001869,3.00e-07,21;UBERON:0000203,3.00e-07,21 | |||
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| ||
|short_description=p4@Adnp | |short_description=p4@Adnp | ||
}} | }} |
Latest revision as of 05:21, 26 September 2015
Short description: | p4@Adnp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Adnp_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENSMUST00000057793_5end |
EntrezGene: | Adnp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.38e-14 | 33 |
neuronal stem cell | 4.38e-14 | 33 |
neuroblast | 4.38e-14 | 33 |
electrically signaling cell | 4.38e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.97e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.97e-10 | 23 |
electrically responsive cell | 2.19e-10 | 39 |
electrically active cell | 2.19e-10 | 39 |
neural cell | 3.49e-08 | 43 |
ectodermal cell | 4.04e-08 | 44 |
neurectodermal cell | 4.04e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.70e-17 | 73 |
nervous system | 9.28e-17 | 75 |
ectoderm-derived structure | 2.47e-15 | 95 |
ectoderm | 2.47e-15 | 95 |
presumptive ectoderm | 2.47e-15 | 95 |
ecto-epithelium | 5.94e-14 | 73 |
regional part of nervous system | 7.57e-14 | 54 |
neurectoderm | 8.51e-14 | 64 |
neural plate | 8.51e-14 | 64 |
presumptive neural plate | 8.51e-14 | 64 |
neural tube | 1.00e-12 | 52 |
neural rod | 1.00e-12 | 52 |
future spinal cord | 1.00e-12 | 52 |
neural keel | 1.00e-12 | 52 |
gray matter | 3.86e-12 | 34 |
brain | 4.49e-11 | 47 |
future brain | 4.49e-11 | 47 |
anterior neural tube | 6.20e-11 | 40 |
pre-chordal neural plate | 6.54e-11 | 49 |
regional part of brain | 1.21e-10 | 46 |
brain grey matter | 1.99e-10 | 29 |
regional part of telencephalon | 1.99e-10 | 29 |
telencephalon | 1.99e-10 | 29 |
regional part of forebrain | 2.19e-10 | 39 |
forebrain | 2.19e-10 | 39 |
future forebrain | 2.19e-10 | 39 |
structure with developmental contribution from neural crest | 2.25e-08 | 92 |
cerebral cortex | 3.00e-07 | 21 |
cerebral hemisphere | 3.00e-07 | 21 |
pallium | 3.00e-07 | 21 |