FFCP PHASE1:Mm9::chr2:61425777..61425781,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=404 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:61425777..61425781,+ | |||
|description=CAGE_peak_at_chr2:61425777..61425781,+ | |description=CAGE_peak_at_chr2:61425777..61425781,+ | ||
|id=chr2:61425777..61425781,+ | |id=chr2:61425777..61425781,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.08e-09!32;CL:0002032!1.08e-09!32;CL:0000037!1.08e-09!32;CL:0000566!1.08e-09!32;CL:0000837!1.08e-09!32;CL:0002031!6.00e-08!25 | |ontology_enrichment_celltype=CL:0000988!1.08e-09!32;CL:0002032!1.08e-09!32;CL:0000037!1.08e-09!32;CL:0000566!1.08e-09!32;CL:0000837!1.08e-09!32;CL:0002031!6.00e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.90e-16,2;CL:0000839,2.02e-14,13;CL:0002031,4.68e-14,25;CL:0000763,1.01e-11,16;CL:0000553,1.13e-11,6;CL:0000556,1.13e-11,6;CL:0000988,6.87e-11,32;CL:0002032,6.87e-11,32;CL:0000037,6.87e-11,32;CL:0000837,6.87e-11,32;CL:0000049,7.15e-10,19;CL:0000815,1.24e-08,1;CL:0000792,1.24e-08,1;CL:0002194,1.36e-08,4;CL:0000766,1.36e-08,4;CL:0000234,1.36e-08,4;CL:0000576,1.36e-08,4;CL:0000235,1.36e-08,4;CL:0000864,1.36e-08,4;CL:0002009,1.36e-08,4;CL:0000040,1.36e-08,4;CL:0000559,1.36e-08,4;CL:0000945,2.89e-08,1;CL:0000236,2.89e-08,1;CL:0000826,2.89e-08,1;CL:0000050,5.72e-08,9;CL:0002320,1.99e-07,46;CL:0000134,1.99e-07,46;CL:0000738,3.03e-07,17;CL:0002087,3.03e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.47e-16!48;UBERON:0002390!1.72e-13!45;UBERON:0003061!1.72e-13!45;UBERON:0002405!2.50e-10!70;UBERON:0004177!1.00e-09!29;UBERON:0003081!3.15e-08!88;UBERON:0003408!7.38e-08!24;UBERON:0002370!5.58e-07!23;UBERON:0000974!5.58e-07!23;UBERON:0004807!5.58e-07!23;UBERON:0005058!5.58e-07!23;UBERON:0003351!5.58e-07!23;UBERON:0009113!5.58e-07!23;UBERON:0003295!5.58e-07!23;UBERON:0009722!5.58e-07!23;UBERON:0005562!5.58e-07!23;UBERON:0007690!5.58e-07!23 | |ontology_enrichment_uberon=UBERON:0002193!2.47e-16!48;UBERON:0002390!1.72e-13!45;UBERON:0003061!1.72e-13!45;UBERON:0002405!2.50e-10!70;UBERON:0004177!1.00e-09!29;UBERON:0003081!3.15e-08!88;UBERON:0003408!7.38e-08!24;UBERON:0002370!5.58e-07!23;UBERON:0000974!5.58e-07!23;UBERON:0004807!5.58e-07!23;UBERON:0005058!5.58e-07!23;UBERON:0003351!5.58e-07!23;UBERON:0009113!5.58e-07!23;UBERON:0003295!5.58e-07!23;UBERON:0009722!5.58e-07!23;UBERON:0005562!5.58e-07!23;UBERON:0007690!5.58e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.37e-14,48;UBERON:0002405,1.37e-14,48;UBERON:0002390,1.60e-12,45;UBERON:0003061,1.60e-12,45;UBERON:0002371,1.01e-11,16;UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1;UBERON:0001474,1.60e-08,22;UBERON:0004765,1.60e-08,22;UBERON:0001434,1.60e-08,22;UBERON:0002384,1.99e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.84473233291,0,0,0.159544317990673,0,0.0874204024189974,0,0.202475267389826,0,1.89277299214943,1.50825876966313,2.97072756258621,0,0.0992909512008853,0,0.47997726838022,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,2.56652954828636,0,0,0,0,0,0,4.66088190564909,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,3.01582567878545,4.35124547054968,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53783792718067,0,0,0.941842285023455,1.0935538217682,0.457556346413045,0.509935289981566,0.559805809294632,0.552799895217695,0.954670618015114,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,1.26404448251271,0,0.102710957164827,0.25984164595559,0,0,0.120195449519969,0,0.100966449948148,0.15241361331,0.302478555410522,0.38983152295901,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.84473233291,0,0,0.159544317990673,0,0.0874204024189974,0,0.202475267389826,0,1.89277299214943,1.50825876966313,2.97072756258621,0,0.0992909512008853,0,0.47997726838022,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,2.56652954828636,0,0,0,0,0,0,4.66088190564909,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0.144649058581512,3.01582567878545,4.35124547054968,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53783792718067,0,0,0.941842285023455,1.0935538217682,0.457556346413045,0.509935289981566,0.559805809294632,0.552799895217695,0.954670618015114,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,1.26404448251271,0,0.102710957164827,0.25984164595559,0,0,0.120195449519969,0,0.100966449948148,0.15241361331,0.302478555410522,0.38983152295901,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:61425777..61425781,+ | |short_description=p@chr2:61425777..61425781,+ | ||
}} | }} |
Latest revision as of 07:37, 5 August 2015
Short description: | p@chr2:61425777..61425781, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:61425777..61425781, + |
Coexpression cluster: | MCL_coexpression_mm9:404 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.90e-16 | 2 |
myeloid lineage restricted progenitor cell | 2.02e-14 | 13 |
hematopoietic lineage restricted progenitor cell | 4.68e-14 | 25 |
myeloid cell | 1.01e-11 | 16 |
megakaryocyte progenitor cell | 1.13e-11 | 6 |
megakaryocyte | 1.13e-11 | 6 |
hematopoietic cell | 6.87e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.87e-11 | 32 |
hematopoietic stem cell | 6.87e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.87e-11 | 32 |
common myeloid progenitor | 7.15e-10 | 19 |
regulatory T cell | 1.24e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.24e-08 | 1 |
monopoietic cell | 1.36e-08 | 4 |
myeloid leukocyte | 1.36e-08 | 4 |
phagocyte | 1.36e-08 | 4 |
monocyte | 1.36e-08 | 4 |
macrophage | 1.36e-08 | 4 |
tissue-resident macrophage | 1.36e-08 | 4 |
macrophage dendritic cell progenitor | 1.36e-08 | 4 |
monoblast | 1.36e-08 | 4 |
promonocyte | 1.36e-08 | 4 |
lymphocyte of B lineage | 2.89e-08 | 1 |
B cell | 2.89e-08 | 1 |
pro-B cell | 2.89e-08 | 1 |
megakaryocyte-erythroid progenitor cell | 5.72e-08 | 9 |
connective tissue cell | 1.99e-07 | 46 |
mesenchymal cell | 1.99e-07 | 46 |
leukocyte | 3.03e-07 | 17 |
nongranular leukocyte | 3.03e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.37e-14 | 48 |
immune system | 1.37e-14 | 48 |
hematopoietic system | 1.60e-12 | 45 |
blood island | 1.60e-12 | 45 |
bone marrow | 1.01e-11 | 16 |
lymph node | 4.39e-09 | 1 |
axillary lymph node | 4.39e-09 | 1 |
peripheral lymph node | 4.39e-09 | 1 |
shoulder | 4.39e-09 | 1 |
bone element | 1.60e-08 | 22 |
skeletal element | 1.60e-08 | 22 |
skeletal system | 1.60e-08 | 22 |
connective tissue | 1.99e-07 | 46 |