FFCP PHASE1:Mm9::chr3:146475835..146475884,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18749 | |EntrezGene=18749 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P68181 | |UniProt=P68181 | ||
|association_with_transcript=25bp_to_NM_011100,uc008rrv.2_5end | |association_with_transcript=25bp_to_NM_011100,uc008rrv.2_5end | ||
|cluster_id=chr3:146475835..146475884,- | |||
|description=CAGE_peak_3_at_Prkacb_5end | |description=CAGE_peak_3_at_Prkacb_5end | ||
|id=chr3:146475835..146475884,- | |id=chr3:146475835..146475884,- | ||
|ontology_enrichment_celltype=CL:0000393!7.06e-13!39;CL:0000211!7.06e-13!39;CL:0000540!1.04e-12!33;CL:0000047!1.04e-12!33;CL:0000031!1.04e-12!33;CL:0000404!1.04e-12!33;CL:0000117!7.03e-11!23;CL:0000337!7.03e-11!23;CL:0000055!2.57e-09!50;CL:0000221!1.37e-08!44;CL:0000133!1.37e-08!44;CL:0002319!2.48e-08!43 | |ontology_enrichment_celltype=CL:0000393!7.06e-13!39;CL:0000211!7.06e-13!39;CL:0000540!1.04e-12!33;CL:0000047!1.04e-12!33;CL:0000031!1.04e-12!33;CL:0000404!1.04e-12!33;CL:0000117!7.03e-11!23;CL:0000337!7.03e-11!23;CL:0000055!2.57e-09!50;CL:0000221!1.37e-08!44;CL:0000133!1.37e-08!44;CL:0002319!2.48e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.05e-13,39;CL:0000211,7.05e-13,39;CL:0000540,1.04e-12,33;CL:0000047,1.04e-12,33;CL:0000031,1.04e-12,33;CL:0000404,1.04e-12,33;CL:0000117,7.02e-11,23;CL:0000337,7.02e-11,23;CL:0000221,1.37e-08,44;CL:0000133,1.37e-08,44;CL:0002319,2.48e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!8.86e-20!122;UBERON:0000025!3.03e-19!114;UBERON:0001017!3.60e-17!73;UBERON:0005743!3.60e-17!73;UBERON:0000073!2.17e-16!75;UBERON:0001016!2.17e-16!75;UBERON:0004121!1.69e-14!102;UBERON:0000924!1.69e-14!102;UBERON:0006601!1.69e-14!102;UBERON:0002346!2.40e-14!71;UBERON:0003075!2.40e-14!71;UBERON:0007284!2.40e-14!71;UBERON:0001049!1.17e-13!52;UBERON:0005068!1.17e-13!52;UBERON:0006241!1.17e-13!52;UBERON:0007135!1.17e-13!52;UBERON:0000955!1.48e-12!50;UBERON:0006238!1.48e-12!50;UBERON:0002616!2.16e-12!49;UBERON:0000033!5.02e-12!63;UBERON:0002020!6.81e-10!34;UBERON:0000477!1.21e-09!154;UBERON:0003080!1.95e-09!40;UBERON:0003056!6.32e-09!49;UBERON:0002780!7.27e-09!39;UBERON:0001890!7.27e-09!39;UBERON:0006240!7.27e-09!39;UBERON:0002791!1.50e-07!29;UBERON:0003528!1.50e-07!29;UBERON:0001893!1.50e-07!29;UBERON:0000475!2.01e-07!200;UBERON:0000483!9.63e-07!181 | |ontology_enrichment_uberon=UBERON:0004111!8.86e-20!122;UBERON:0000025!3.03e-19!114;UBERON:0001017!3.60e-17!73;UBERON:0005743!3.60e-17!73;UBERON:0000073!2.17e-16!75;UBERON:0001016!2.17e-16!75;UBERON:0004121!1.69e-14!102;UBERON:0000924!1.69e-14!102;UBERON:0006601!1.69e-14!102;UBERON:0002346!2.40e-14!71;UBERON:0003075!2.40e-14!71;UBERON:0007284!2.40e-14!71;UBERON:0001049!1.17e-13!52;UBERON:0005068!1.17e-13!52;UBERON:0006241!1.17e-13!52;UBERON:0007135!1.17e-13!52;UBERON:0000955!1.48e-12!50;UBERON:0006238!1.48e-12!50;UBERON:0002616!2.16e-12!49;UBERON:0000033!5.02e-12!63;UBERON:0002020!6.81e-10!34;UBERON:0000477!1.21e-09!154;UBERON:0003080!1.95e-09!40;UBERON:0003056!6.32e-09!49;UBERON:0002780!7.27e-09!39;UBERON:0001890!7.27e-09!39;UBERON:0006240!7.27e-09!39;UBERON:0002791!1.50e-07!29;UBERON:0003528!1.50e-07!29;UBERON:0001893!1.50e-07!29;UBERON:0000475!2.01e-07!200;UBERON:0000483!9.63e-07!181 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,9.36e-20,122;UBERON:0000025,3.20e-19,114;UBERON:0001017,3.59e-17,73;UBERON:0010314,1.53e-16,92;UBERON:0001016,2.16e-16,75;UBERON:0000073,6.56e-15,54;UBERON:0001049,1.16e-13,52;UBERON:0005068,1.16e-13,52;UBERON:0006241,1.16e-13,52;UBERON:0007135,1.16e-13,52;UBERON:0002346,1.79e-13,64;UBERON:0003075,1.79e-13,64;UBERON:0007284,1.79e-13,64;UBERON:0004121,1.92e-13,95;UBERON:0000924,1.92e-13,95;UBERON:0006601,1.92e-13,95;UBERON:0010371,2.02e-11,73;UBERON:0000955,7.57e-11,47;UBERON:0006238,7.57e-11,47;UBERON:0002616,1.10e-10,46;UBERON:0002020,6.80e-10,34;UBERON:0003080,1.94e-09,40;UBERON:0003056,6.31e-09,49;UBERON:0002780,7.26e-09,39;UBERON:0001890,7.26e-09,39;UBERON:0006240,7.26e-09,39;UBERON:0003528,1.50e-07,29;UBERON:0002791,1.50e-07,29;UBERON:0001893,1.50e-07,29 | |||
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|phase1_expression=9.28863313207805,1.04692622291808,2.27499619694768,0.30246421130683,1.00179145989269,2.01455126294268,1.40167584357315,3.35720640948098,2.81577444303333,1.63845168425395,1.19852577757853,2.39316476986009,2.05440875917447,2.88487327982691,1.99865857089398,1.82227740650843,1.39912375625629,2.36596624018678,2.4680598049033,2.12194825899015,6.29320347117916,3.97163804803541,1.56719873483361,0.799962113967033,0.68822784320151,1.14846392823004,0.86152399231815,1.939241094173,1.33016393619462,3.2763916868791,0.665191531965914,0.635030673459631,1.23012957516914,0,0.577703239502549,1.49611180822643,1.83752420636132,6.27797446105362,2.3440060335714,3.66466620781659,2.94115744015507,4.78131839470912,6.311634589405,6.54663453473002,6.9950082541465,4.58866880404204,4.69434806608824,3.70642765846759,6.15121311656521,4.86074747685709,2.09979632438044,4.31257693094915,1.8456086666351,2.17608642603403,2.35265659399725,4.88792928468299,6.5902691185914,10.3134418455488,9.71119012126069,9.52183762689659,9.50747105259269,1.69422266034566,1.77858959222228,2.2497492932035,2.96659908770092,0,3.59520132622086,2.68952813725088,7.98410014775278,8.6403800532282,5.8890989178387,13.139945282575,7.95126747425809,8.94182834269164,6.99671938433125,4.5960939330501,14.3150645299205,15.5778552463929,13.2101618600369,11.7378796079873,10.7955419450843,16.6692278578163,12.2840519560608,11.2552522006336,14.6686317865738,9.72274332063103,12.5287079103211,16.7759501242771,4.84647637332378,3.02286240427142,12.4641730141721,12.0459342777394,12.9194553404473,5.93673510801599,3.89865850468601,8.51251085484938,6.03911006566533,5.45377032249785,5.71529210126311,4.59341446863442,7.60554466794075,3.84979432242953,2.54805239706646,7.11066703153331,1.29894624606728,1.26679932737549,2.52762222507392,7.30776830201984,4.91981978929626,9.35185476108396,4.16364784238726,4.87144765299426,5.76538743140146,6.33035090321015,8.93674174231356,10.4303270803631,6.67426412882809,10.8449517689934,1.76922110389975,4.69123864847487,3.75430581382669,5.81850303762267,1.86391761218122,9.36898550436951,10.0534419270458,2.04365644166873,3.95389910869537,3.59941638596045,3.55796635804581,18.1246673679835,10.0650132620098,17.0889918873496,10.2556348913443,8.95004100656157,11.0127663616567,13.1415423084884,7.02691610567182,5.59831367745419,4.29628689337247,2.94618598241064,6.8963834770233,4.36813998423599,5.22180176435513,5.42537344208574,8.300452896462,7.17436833595159,4.49768277886698,6.20888089773638,4.31135985865684,5.8622884852024,4.75068035242662,6.1374805079721,4.44875598760957,4.52727816478817,5.14455341019859,6.17006227137329,2.80885274925294,0.51469581422943,1.98914449576915,4.14251545071004,4.45599513964083,3.78130329068131,5.91861838963026,5.3126342571799,6.32495162838251,6.51095045301142,6.70683503499048,6.889155199663,7.5697530960201,6.56669856316381,8.59329381186071,8.04099930839328,9.44065495751518,6.44190810049784,8.62188789112922,10.3933658503077,0.660837565967596,0.528901133327089,4.26576501070468,4.41249676534833,3.35055399437443,4.63872106633688,3.33567065767305,2.28270751335071,5.21981967698963,6.58795818896044,5.52937459360593,6.56556357735798,6.62877896205008,3.59527763461689,4.75503709724327,5.57595565112228,3.98302592001472,4.34144347916969,1.1270773567308,3.86937522906097,6.7883370508669,8.20589092716727,8.34722290040196,8.70899873079653,7.06494275286187,5.42947521255922,10.9687472022245,2.16898637430922,3.73462090715086,0.899448449539415,1.82574109249653,2.65294875727659,1.52775511068852,2.30156909960649,6.48540907100142,5.49122826376163,14.3768206527355,6.32639611036456,7.80094182786401,9.85057623993736,6.99649912735457,6.27176577772377,8.68339993783042,6.82169082373745,4.56301934037672,5.60158783058121,3.75504397261603,3.68513766371995,5.71304738126433,12.8788207586147,13.5566223931324,15.0595988961167,13.7131101045439,8.02930242107116,8.97961905702657,10.2700831592873,0,1.08781136763742,1.96705709207614,3.86311444826625,14.1284519189257,18.4022347949759,8.6885521049638,5.04941854408746,3.78609863299508,8.58965237452605,11.4174400798383,6.4521575447189,6.23836287430704,9.90767857760913,9.31064613852257,7.01414058987149,7.11518000303742,6.74774764485795,5.81954349353901,6.58842733568844,8.1443479676788,8.74341651754438,2.65490276679926,4.85561272309963,4.23252979750651,3.01768127609437,1.47650946440386,2.15204603560749,6.46070732920553,5.81653967164009,4.9909632973861,5.68866164284469,1.05418608574999,8.25084345985495,9.53230896110606,4.86164953884538,4.2688365648309,5.35842587578981,4.78818630834139,7.31312152168489,8.22745103010605,8.22055362609418,3.28540391289194,5.2958017715955,5.73373834942901,1.6488625294148,5.65125493435669,5.48847616846218,3.70054266409723,2.46211349617592,5.24665505933731,12.7943458387252,2.9048049735635,4.74689796315412,2.96311243791539,2.82552685507037,3.55404992074665,5.0331198105435,5.94924504978494,6.29781535456461,4.97519905695926,9.54670618015114,4.4287039101359,4.26970880966382,5.40026704109006,4.3908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| ||
|short_description=p3@Prkacb | |short_description=p3@Prkacb | ||
}} | }} |
Latest revision as of 18:58, 1 October 2015
Short description: | p3@Prkacb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Prkacb_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_NM_011100, uc008rrv.2_5end |
EntrezGene: | Prkacb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.05e-13 | 39 |
electrically active cell | 7.05e-13 | 39 |
neuron | 1.04e-12 | 33 |
neuronal stem cell | 1.04e-12 | 33 |
neuroblast | 1.04e-12 | 33 |
electrically signaling cell | 1.04e-12 | 33 |
CNS neuron (sensu Vertebrata) | 7.02e-11 | 23 |
neuroblast (sensu Vertebrata) | 7.02e-11 | 23 |
ectodermal cell | 1.37e-08 | 44 |
neurectodermal cell | 1.37e-08 | 44 |
neural cell | 2.48e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 9.36e-20 | 122 |
tube | 3.20e-19 | 114 |
central nervous system | 3.59e-17 | 73 |
structure with developmental contribution from neural crest | 1.53e-16 | 92 |
nervous system | 2.16e-16 | 75 |
regional part of nervous system | 6.56e-15 | 54 |
neural tube | 1.16e-13 | 52 |
neural rod | 1.16e-13 | 52 |
future spinal cord | 1.16e-13 | 52 |
neural keel | 1.16e-13 | 52 |
neurectoderm | 1.79e-13 | 64 |
neural plate | 1.79e-13 | 64 |
presumptive neural plate | 1.79e-13 | 64 |
ectoderm-derived structure | 1.92e-13 | 95 |
ectoderm | 1.92e-13 | 95 |
presumptive ectoderm | 1.92e-13 | 95 |
ecto-epithelium | 2.02e-11 | 73 |
brain | 7.57e-11 | 47 |
future brain | 7.57e-11 | 47 |
regional part of brain | 1.10e-10 | 46 |
gray matter | 6.80e-10 | 34 |
anterior neural tube | 1.94e-09 | 40 |
pre-chordal neural plate | 6.31e-09 | 49 |
regional part of forebrain | 7.26e-09 | 39 |
forebrain | 7.26e-09 | 39 |
future forebrain | 7.26e-09 | 39 |
brain grey matter | 1.50e-07 | 29 |
regional part of telencephalon | 1.50e-07 | 29 |
telencephalon | 1.50e-07 | 29 |