FFCP PHASE1:Hg19::chr13:38161054..38161069,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:38161054..38161069,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_at_chr13:38161054..38161069,- | |description=CAGE_peak_at_chr13:38161054..38161069,- | ||
|id=chr13:38161054..38161069,- | |id=chr13:38161054..38161069,- | ||
|ontology_enrichment_celltype=CL:0000055!2.27e-24!180;CL:0000057!2.20e-15!75;CL:0000680!1.85e-12!57;CL:0000056!1.85e-12!57;CL:0000355!1.85e-12!57;CL:0002334!6.15e-12!12;CL:0000187!6.58e-12!54;CL:0002494!3.14e-10!16;CL:0000183!4.81e-10!59;CL:0000393!1.03e-09!60;CL:0000211!1.03e-09!60;CL:0000048!5.01e-09!430;CL:0000723!1.87e-08!436;CL:0000034!5.15e-08!444;CL:0000222!8.61e-08!119;CL:0000192!6.37e-07!42;CL:0000514!6.37e-07!42;CL:0002548!8.57e-07!6 | |ontology_enrichment_celltype=CL:0000055!2.27e-24!180;CL:0000057!2.20e-15!75;CL:0000680!1.85e-12!57;CL:0000056!1.85e-12!57;CL:0000355!1.85e-12!57;CL:0002334!6.15e-12!12;CL:0000187!6.58e-12!54;CL:0002494!3.14e-10!16;CL:0000183!4.81e-10!59;CL:0000393!1.03e-09!60;CL:0000211!1.03e-09!60;CL:0000048!5.01e-09!430;CL:0000723!1.87e-08!436;CL:0000034!5.15e-08!444;CL:0000222!8.61e-08!119;CL:0000192!6.37e-07!42;CL:0000514!6.37e-07!42;CL:0002548!8.57e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.41e-11;12!CL:0002580;8.83e-08;3!CL:0002570;6.37e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.73e-11,12;CL:0000057,1.03e-10,76;CL:0002580,9.94e-08,3;CL:0002570,6.82e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.56e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.14e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.83e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.66e-13!61;UBERON:0002036!3.66e-13!61;UBERON:0003082!3.66e-13!61;UBERON:0002385!2.25e-12!63;UBERON:0001015!2.25e-12!63;UBERON:0000383!2.25e-12!63;UBERON:0004872!5.80e-11!84;UBERON:0000914!1.61e-10!83;UBERON:0002329!1.61e-10!83;UBERON:0003077!1.61e-10!83;UBERON:0003059!1.61e-10!83;UBERON:0007282!1.61e-10!83;UBERON:0009618!1.61e-10!83;UBERON:0007285!1.61e-10!83;UBERON:0004290!5.15e-10!70;UBERON:0000948!1.10e-09!24;UBERON:0005498!1.10e-09!24;UBERON:0004140!1.10e-09!24;UBERON:0009881!1.10e-09!24;UBERON:0004141!1.10e-09!24;UBERON:0003084!1.10e-09!24;UBERON:0007005!1.10e-09!24;UBERON:0004139!1.10e-09!24;UBERON:0004291!1.10e-09!24;UBERON:0001637!1.42e-09!42;UBERON:0003509!1.42e-09!42;UBERON:0004572!1.42e-09!42;UBERON:0007100!6.43e-09!27;UBERON:0000490!3.66e-08!138;UBERON:0000486!4.33e-08!82;UBERON:0004573!7.93e-08!33;UBERON:0004571!7.93e-08!33;UBERON:0005256!8.49e-08!143;UBERON:0003914!5.31e-07!118;UBERON:0004535!5.60e-07!110;UBERON:0001009!6.73e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.43e-08,62;UBERON:0002036,5.43e-08,62;UBERON:0003082,5.43e-08,62;UBERON:0002385,1.33e-07,64;UBERON:0001015,1.33e-07,64;UBERON:0000383,1.33e-07,64;UBERON:0007524,5.54e-07,73 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,1.34465029290355,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,4.02420515822182,0.639312809217652,0.722878304769133,1.00267582127178,0.434539556882471,2.3858578411533,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0.367663080345869,1.62028389576352,0,0,0,0,0,0,0,0,0,7.9515512271251,0.633152558322899,1.98613771219828,11.7603014507014,3.19201543978521,0.560677600142307,1.06748995729705,2.71334303258876,0.622422070799533,5.25371621071783,7.02886183387873,0,4.03323147135999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,1.22595118319608,0.300476117813194,2.94923676216055,0.89694817844431,0.213557388818567,0.847727604638247,0.600182192168805,0.618315175430633,1.28820270022815,0.18611685633159,0,0.0974370051611986,1.26216887122057,1.10459878370759,0.161646056818812,1.77504796258307,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,1.690605505112,0,2.08014873822732,0,0,0,0.285955987316295,0,0,0.325736184293735,0.710783897485092,0,7.53598442648965,5.22920075160176,5.79843348855931,0,0,0,1.4377491329495,3.44585807502342,0,1.01346914667305,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,3.74347550755453,5.35286966391485,1.10391690523754,0.585707074963566,0.902838299183157,6.82222512167955,1.03473071292505,1.32845119707087,0.553107505625109,0.0868836144680828,0,0,0,0,0,0,0,0,2.48107807818777,2.30192959932094,7.01650236082684,2.30650468660262,0.511707249066704,3.21707842287215,2.96836132889982,0.771048469013278,3.37367278094941,0.574890092096664,0.519254429183621,2.32420756919918,0,0.40101294060657,0,0.918515585316854,1.0925470080403,0.131124414959424,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.386682873168488,1.23238893691716,1.68854042198743,1.24052915236078,0,0.725083469571143,0.596586391912706,2.22580089116843,0.330569830721956,0,0,0,0,2.51849877464512,0.6970372701606,0,0.532306030317022,0,0,1.71749864090389,0,0,0.762520775695299,0,0,0.318203247925937,0.78494864019923,0.359744915166629,4.39259247577688,1.53156123049392,0,0,0.421258456238981,0,3.41198885483798,0,0.9554993798559,7.7772987574542,0,0,3.3171948762061,1.31535265576129,0,0,0.202910376962704,0.30982349809975,0,0,0,1.07001315444375,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,2.79935628895627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,4.01288823649394,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,0.458320848023367,0,0.199679000498991,0,0,0.268733889946905,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,1.16856654923612,8.3220879225392,0.378806010550178,0.50313580350515,0,1.83072054717539,0.302461847526478,0.466311601748341,0.295710299979268,0,0.899606224327209,1.24210365501008,0.414706207840855,5.58267600571789,2.08698024724694,1.95334891696384,5.71207818253193,3.66183659884195,0.727394636810238,3.22231671127465,0,0.796191777397232,0.400027764663154,4.46414416737631,2.02049693259551,0,0,0,0,5.89435406331908,0,1.22368352253234,0.537266523244462,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45206090914786,0,0,2.82140754952547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,2.29280684514135,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,4.56579360254748,0,0,0,0,2.90603563420313,0,0.801711364730253,0.62164849248911,0.85359238546975,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,8.11870101936739,3.39997695141398,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,3.73839652313197,0,0,0,0,0,0,0,0,0,0,0,0,1.5870805215462,10.7878555268358,0,6.05677186973305,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,1.90451545170992,0.129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|short_description=p@chr13:38161054..38161069,- | |short_description=p@chr13:38161054..38161069,- | ||
}} | }} |
Latest revision as of 15:53, 24 July 2015
Short description: | p@chr13:38161054..38161069, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38161054..38161069, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.73e-11 | 12 |
fibroblast | 1.03e-10 | 76 |
preadipocyte of the breast | 9.94e-08 | 3 |
mesenchymal stem cell of adipose | 6.82e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.43e-08 | 62 |
striated muscle tissue | 5.43e-08 | 62 |
myotome | 5.43e-08 | 62 |
muscle tissue | 1.33e-07 | 64 |
musculature | 1.33e-07 | 64 |
musculature of body | 1.33e-07 | 64 |
dense mesenchyme tissue | 5.54e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.83e-07 | 14 |