FFCP PHASE1:Hg19::chr13:94885265..94885270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:94885265..94885270,+ | |||
|description=CAGE_peak_at_chr13:94885265..94885270,+ | |description=CAGE_peak_at_chr13:94885265..94885270,+ | ||
|id=chr13:94885265..94885270,+ | |id=chr13:94885265..94885270,+ | ||
|ontology_enrichment_celltype=CL:0000243!1.36e-08!15;CL:0000125!1.36e-08!15;CL:0000030!1.36e-08!15;CL:0000339!1.36e-08!15;CL:0002319!6.53e-08!25;CL:0000095!2.09e-07!17;CL:0000123!2.09e-07!17;CL:0000133!2.20e-07!59 | |ontology_enrichment_celltype=CL:0000243!1.36e-08!15;CL:0000125!1.36e-08!15;CL:0000030!1.36e-08!15;CL:0000339!1.36e-08!15;CL:0002319!6.53e-08!25;CL:0000095!2.09e-07!17;CL:0000123!2.09e-07!17;CL:0000133!2.20e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000138;5.54e-08;6!CL:0000540;6.55e-08;6!CL:0000404;6.55e-08;6!CL:0002149;6.55e-08;6!CL:0002255;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6;CL:0000540,5.92e-08,6;CL:0000031,5.92e-08,6;CL:0000404,5.92e-08,6;CL:0002149,6.78e-08,6;CL:0002255,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.81e-40;1!UBERON:0003056;1.71e-14;3!CL:0000031;6.55e-08;6 | |||
|ontology_enrichment_disease=DOID:171!3.14e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6!DOID:3001;6.55e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6;DOID:3001,6.78e-08,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.81e-40;1!UBERON:0001785;1.81e-40;1!UBERON:0002464;1.81e-40;1!UBERON:0004904;1.81e-40;1!UBERON:0001021;1.81e-40;1!UBERON:0003714;5.15e-21;2!UBERON:0005162;5.15e-21;2!UBERON:0000122;5.15e-21;2!UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.48e-40,1;UBERON:0001785,1.48e-40,1;UBERON:0002464,1.48e-40,1;UBERON:0004904,1.48e-40,1;UBERON:0001021,1.48e-40,1;UBERON:0003902,1.48e-40,1;UBERON:0005425,1.48e-40,1;UBERON:0003714,4.66e-21,2;UBERON:0005162,4.66e-21,2;UBERON:0000122,4.66e-21,2;UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3;UBERON:0001781,3.10e-11,4;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0.924291702687866,0.15350367472613,0.137836572484531,0.322260734604821,0,0.0852266274161009,0,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0.247127877893006,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,2.29465929397901,0,0.274083849293502,0.596143835108969,0.0633107959558787,0,0.240476460754601,0.213452994739353,0,0,0,0.514784993585894,0,0,0,0.135904206073614,0.418411385249333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0,0,1.08803560673895,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0,0.830091809617385,0.249960815924213,0,0,0,0,0,0,0.467426619694449,0.554805861502613,0.189403005275089,0,0,0,0.604923695052956,0.466311601748341,0.295710299979268,0,0,0.310525913752519,0,0,0,0.300515217994437,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0.255788742607303,0,0.471797825567689,0.327628914576042,0,0.850299680406731,0.867550349813015,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0.215927591218621,0.47775168788705,0,0.47404083519818,0,0.173858272302579,0,0,0,0,0,0,0.170426809518315,0,1.14553434272025,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0.439762066981716,0.603851374266694,0,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0.665320713092027,0,0.213454691755431,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr13:94885265..94885270,+ | |short_description=p@chr13:94885265..94885270,+ | ||
}} | }} |
Latest revision as of 17:29, 24 July 2015
Short description: | p@chr13:94885265..94885270, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:94885265..94885270, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
neuron | 5.92e-08 | 6 |
neuroblast | 5.92e-08 | 6 |
electrically signaling cell | 5.92e-08 | 6 |
epithelial cell of uterus | 6.78e-08 | 6 |
stromal cell of endometrium | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.48e-40 | 1 |
cranial nerve | 1.48e-40 | 1 |
nerve trunk | 1.48e-40 | 1 |
nerve connecting eye with brain | 1.48e-40 | 1 |
nerve | 1.48e-40 | 1 |
retinal neural layer | 1.48e-40 | 1 |
presumptive neural retina | 1.48e-40 | 1 |
neural tissue | 4.66e-21 | 2 |
multi cell component structure | 4.66e-21 | 2 |
neuron projection bundle | 4.66e-21 | 2 |
cartilage tissue | 1.22e-14 | 3 |
skeletal tissue | 1.22e-14 | 3 |
layer of retina | 3.10e-11 | 4 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.62e-41 | 1 |
extraosseous chondrosarcoma | 6.62e-41 | 1 |
myxoid chondrosarcoma | 6.62e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 6.62e-41 | 1 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |
female reproductive endometrioid cancer | 6.78e-08 | 6 |