FFCP PHASE1:Hg19::chr14:105155980..105155999,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64423 | |EntrezGene=64423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23791 | |HGNC=23791 | ||
|TSSclassifier=strong | |||
|UniProt=Q27J81 | |UniProt=Q27J81 | ||
|association_with_transcript=6bp_to_ENST00000392634_5end | |association_with_transcript=6bp_to_ENST00000392634_5end | ||
|cluster_id=chr14:105155980..105155999,+ | |||
|description=CAGE_peak_2_at_INF2_5end | |description=CAGE_peak_2_at_INF2_5end | ||
|id=chr14:105155980..105155999,+ | |id=chr14:105155980..105155999,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.35e-18!254;CL:0000222!2.86e-13!119;CL:0000220!3.62e-11!246;CL:0002321!3.91e-11!248;CL:0000213!2.38e-10!57;CL:0000215!2.38e-10!57;CL:0002078!7.01e-09!44;CL:0000115!5.02e-08!35;CL:0002139!6.38e-08!24;CL:0000071!5.83e-07!18;CL:0002546!5.83e-07!18 | |ontology_enrichment_celltype=CL:0000066!1.35e-18!254;CL:0000222!2.86e-13!119;CL:0000220!3.62e-11!246;CL:0002321!3.91e-11!248;CL:0000213!2.38e-10!57;CL:0000215!2.38e-10!57;CL:0002078!7.01e-09!44;CL:0000115!5.02e-08!35;CL:0002139!6.38e-08!24;CL:0000071!5.83e-07!18;CL:0002546!5.83e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.46e-08;24!CL:0000115;2.75e-07;36!CL:0000071;4.12e-07;18!CL:0000213;9.48e-07;58!CL:0000215;9.48e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.60e-18,253;CL:0000222,2.62e-13,121;CL:0000213,8.23e-11,58;CL:0000215,8.23e-11,58;CL:0002321,9.11e-11,250;CL:0002078,2.57e-09,45;CL:0000115,2.57e-08,36;CL:0002139,4.91e-08,24;CL:0000071,4.66e-07,18;CL:0002546,4.66e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;4.12e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.40e-18!312;UBERON:0000483!3.02e-18!309;UBERON:0000025!3.47e-18!194;UBERON:0000477!3.94e-18!286;UBERON:0004111!1.49e-16!241;UBERON:0000475!6.81e-14!365;UBERON:0000467!5.40e-13!625;UBERON:0000480!1.18e-12!626;UBERON:0000481!4.33e-12!347;UBERON:0000064!6.51e-12!219;UBERON:0000468!6.69e-12!659;UBERON:0003914!3.74e-11!118;UBERON:0002049!3.56e-10!79;UBERON:0007798!3.56e-10!79;UBERON:0000055!2.76e-09!69;UBERON:0001049!1.42e-08!57;UBERON:0005068!1.42e-08!57;UBERON:0006241!1.42e-08!57;UBERON:0007135!1.42e-08!57;UBERON:0000923!1.52e-08!604;UBERON:0005291!1.52e-08!604;UBERON:0006598!1.52e-08!604;UBERON:0002532!1.52e-08!604;UBERON:0002050!1.97e-08!605;UBERON:0005423!1.97e-08!605;UBERON:0000922!1.99e-08!612;UBERON:0002100!2.88e-08!216;UBERON:0001981!3.00e-08!60;UBERON:0007500!3.00e-08!60;UBERON:0004537!3.00e-08!60;UBERON:0006965!3.00e-08!60;UBERON:0000062!3.85e-08!511;UBERON:0000955!5.58e-08!69;UBERON:0006238!5.58e-08!69;UBERON:0002616!6.10e-08!59;UBERON:0003075!6.14e-08!86;UBERON:0007284!6.14e-08!86;UBERON:0001893!1.71e-07!34;UBERON:0002020!1.76e-07!34;UBERON:0003528!1.76e-07!34;UBERON:0005743!2.82e-07!86;UBERON:0001637!2.88e-07!42;UBERON:0003509!2.88e-07!42;UBERON:0004572!2.88e-07!42;UBERON:0002791!4.94e-07!33;UBERON:0000033!5.29e-07!123;UBERON:0005256!5.76e-07!143;UBERON:0001986!5.83e-07!18;UBERON:0004638!5.83e-07!18;UBERON:0004852!5.83e-07!18;UBERON:0000490!9.88e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.12e-07;18!UBERON:0001986;4.12e-07;18!UBERON:0004852;4.12e-07;18!UBERON:0003914;8.79e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,9.11e-19,192;UBERON:0000119,9.59e-19,309;UBERON:0000483,1.64e-18,306;UBERON:0004111,9.01e-17,240;UBERON:0003914,4.70e-11,117;UBERON:0002049,1.15e-10,78;UBERON:0007798,1.15e-10,78;UBERON:0000055,7.13e-10,68;UBERON:0010371,6.06e-09,104;UBERON:0001049,6.61e-09,56;UBERON:0005068,6.61e-09,56;UBERON:0006241,6.61e-09,56;UBERON:0007135,6.61e-09,56;UBERON:0007500,1.03e-08,59;UBERON:0001981,1.03e-08,59;UBERON:0004537,1.03e-08,59;UBERON:0006965,1.03e-08,59;UBERON:0003075,2.55e-08,82;UBERON:0007284,2.55e-08,82;UBERON:0000955,3.50e-08,68;UBERON:0006238,3.50e-08,68;UBERON:0000073,8.37e-08,53;UBERON:0002616,8.37e-08,53;UBERON:0010314,8.82e-08,132;UBERON:0001893,1.46e-07,34;UBERON:0003528,1.51e-07,34;UBERON:0002020,1.51e-07,34;UBERON:0001637,3.11e-07,42;UBERON:0003509,3.11e-07,42;UBERON:0004572,3.11e-07,42;UBERON:0003056,3.70e-07,61;UBERON:0004638,4.66e-07,18;UBERON:0001986,4.66e-07,18;UBERON:0004852,4.66e-07,18;UBERON:0002346,9.99e-07,86 | |||
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| ||
|short_description=p2@INF2 | |short_description=p2@INF2 | ||
}} | }} |
Latest revision as of 17:16, 18 September 2015
Short description: | p2@INF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_INF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000392634_5end |
EntrezGene: | INF2 |
HGNC: | 23791 |
UniProt: | Q27J81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.60e-18 | 253 |
mesodermal cell | 2.62e-13 | 121 |
lining cell | 8.23e-11 | 58 |
barrier cell | 8.23e-11 | 58 |
embryonic cell | 9.11e-11 | 250 |
meso-epithelial cell | 2.57e-09 | 45 |
endothelial cell | 2.57e-08 | 36 |
endothelial cell of vascular tree | 4.91e-08 | 24 |
blood vessel endothelial cell | 4.66e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.66e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
tube | 9.11e-19 | 192 |
cell layer | 9.59e-19 | 309 |
epithelium | 1.64e-18 | 306 |
anatomical conduit | 9.01e-17 | 240 |
epithelial tube | 4.70e-11 | 117 |
vasculature | 1.15e-10 | 78 |
vascular system | 1.15e-10 | 78 |
vessel | 7.13e-10 | 68 |
ecto-epithelium | 6.06e-09 | 104 |
neural tube | 6.61e-09 | 56 |
neural rod | 6.61e-09 | 56 |
future spinal cord | 6.61e-09 | 56 |
neural keel | 6.61e-09 | 56 |
epithelial tube open at both ends | 1.03e-08 | 59 |
blood vessel | 1.03e-08 | 59 |
blood vasculature | 1.03e-08 | 59 |
vascular cord | 1.03e-08 | 59 |
neural plate | 2.55e-08 | 82 |
presumptive neural plate | 2.55e-08 | 82 |
brain | 3.50e-08 | 68 |
future brain | 3.50e-08 | 68 |
regional part of nervous system | 8.37e-08 | 53 |
regional part of brain | 8.37e-08 | 53 |
structure with developmental contribution from neural crest | 8.82e-08 | 132 |
telencephalon | 1.46e-07 | 34 |
brain grey matter | 1.51e-07 | 34 |
gray matter | 1.51e-07 | 34 |
artery | 3.11e-07 | 42 |
arterial blood vessel | 3.11e-07 | 42 |
arterial system | 3.11e-07 | 42 |
pre-chordal neural plate | 3.70e-07 | 61 |
blood vessel endothelium | 4.66e-07 | 18 |
endothelium | 4.66e-07 | 18 |
cardiovascular system endothelium | 4.66e-07 | 18 |
neurectoderm | 9.99e-07 | 86 |