FFCP PHASE1:Hg19::chr10:17277882..17277895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17277882..17277895,+ | |||
|description=CAGE_peak_at_chr10:17277882..17277895,+ | |description=CAGE_peak_at_chr10:17277882..17277895,+ | ||
|id=chr10:17277882..17277895,+ | |id=chr10:17277882..17277895,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.26e-26!42;CL:0000860!1.32e-23!45;CL:0000766!8.82e-22!76;CL:0000219!1.31e-19!390;CL:0000557!6.99e-19!71;CL:0000134!1.01e-18!358;CL:0002320!1.06e-18!365;CL:0000839!1.28e-18!70;CL:0002194!1.33e-18!63;CL:0000576!1.33e-18!63;CL:0000040!1.33e-18!63;CL:0000559!1.33e-18!63;CL:0002009!3.27e-18!65;CL:0000738!1.53e-17!140;CL:0000048!1.26e-15!430;CL:0000723!1.86e-14!436;CL:0000034!3.43e-14!444;CL:0002087!7.02e-14!119;CL:0002031!7.73e-13!124;CL:0002371!2.37e-12!591;CL:0000988!2.13e-10!182;CL:0000144!2.65e-10!625;CL:0000763!2.76e-10!112;CL:0000049!2.76e-10!112;CL:0000037!3.73e-10!172;CL:0000566!3.73e-10!172;CL:0002032!1.07e-08!165;CL:0000837!1.07e-08!165;CL:0000012!4.28e-07!682 | |ontology_enrichment_celltype=CL:0002057!4.26e-26!42;CL:0000860!1.32e-23!45;CL:0000766!8.82e-22!76;CL:0000219!1.31e-19!390;CL:0000557!6.99e-19!71;CL:0000134!1.01e-18!358;CL:0002320!1.06e-18!365;CL:0000839!1.28e-18!70;CL:0002194!1.33e-18!63;CL:0000576!1.33e-18!63;CL:0000040!1.33e-18!63;CL:0000559!1.33e-18!63;CL:0002009!3.27e-18!65;CL:0000738!1.53e-17!140;CL:0000048!1.26e-15!430;CL:0000723!1.86e-14!436;CL:0000034!3.43e-14!444;CL:0002087!7.02e-14!119;CL:0002031!7.73e-13!124;CL:0002371!2.37e-12!591;CL:0000988!2.13e-10!182;CL:0000144!2.65e-10!625;CL:0000763!2.76e-10!112;CL:0000049!2.76e-10!112;CL:0000037!3.73e-10!172;CL:0000566!3.73e-10!172;CL:0002032!1.07e-08!165;CL:0000837!1.07e-08!165;CL:0000012!4.28e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.18e-38;33!CL:0002057;3.18e-38;33!CL:0000473;6.49e-28;39!CL:0000234;6.49e-28;39!CL:0000576;1.31e-22;48!CL:0000766;4.47e-19;69!CL:0000763;7.03e-09;100!CL:0002087;1.12e-08;104!CL:0000738;3.03e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.24e-40,42;CL:0002057,5.24e-40,42;CL:0000473,1.51e-38,48;CL:0000234,1.51e-38,48;CL:0000766,5.64e-36,72;CL:0000839,2.62e-30,66;CL:0000557,1.10e-29,67;CL:0000738,2.20e-29,136;CL:0002194,1.42e-28,59;CL:0000576,1.42e-28,59;CL:0000040,1.42e-28,59;CL:0000559,1.42e-28,59;CL:0002009,2.70e-27,61;CL:0002031,2.67e-24,120;CL:0002087,2.90e-24,115;CL:0000134,3.46e-21,354;CL:0000037,1.25e-20,168;CL:0002320,2.59e-20,361;CL:0000988,9.43e-20,177;CL:0000763,1.05e-19,108;CL:0000049,1.05e-19,108;CL:0000219,2.69e-19,386;CL:0002032,3.36e-19,161;CL:0000837,3.36e-19,161;CL:0000048,9.98e-15,427;CL:0000723,3.40e-14,433;CL:0000034,3.93e-14,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.03e-29;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.28e-19!375;UBERON:0001474!3.98e-19!86;UBERON:0002371!1.11e-18!80;UBERON:0004765!6.67e-18!101;UBERON:0001434!6.67e-18!101;UBERON:0002390!2.12e-16!102;UBERON:0003061!2.12e-16!102;UBERON:0002193!3.91e-16!112;UBERON:0002405!1.32e-10!115;UBERON:0002204!2.40e-10!167 | |ontology_enrichment_uberon=UBERON:0002384!2.28e-19!375;UBERON:0001474!3.98e-19!86;UBERON:0002371!1.11e-18!80;UBERON:0004765!6.67e-18!101;UBERON:0001434!6.67e-18!101;UBERON:0002390!2.12e-16!102;UBERON:0003061!2.12e-16!102;UBERON:0002193!3.91e-16!112;UBERON:0002405!1.32e-10!115;UBERON:0002204!2.40e-10!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.11e-28,76;UBERON:0001474,1.22e-26,82;UBERON:0004765,3.47e-23,90;UBERON:0002390,1.62e-21,98;UBERON:0003061,1.62e-21,98;UBERON:0002384,1.11e-20,371;UBERON:0002405,1.31e-20,93;UBERON:0001434,1.15e-19,100;UBERON:0002193,2.13e-18,108;UBERON:0003081,1.22e-10,203;UBERON:0002204,1.49e-10,167 | |||
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| ||
|short_description=p@chr10:17277882..17277895,+ | |short_description=p@chr10:17277882..17277895,+ | ||
}} | }} |
Latest revision as of 12:18, 23 July 2015
Short description: | p@chr10:17277882..17277895, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17277882..17277895, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.24e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.24e-40 | 42 |
defensive cell | 1.51e-38 | 48 |
phagocyte | 1.51e-38 | 48 |
myeloid leukocyte | 5.64e-36 | 72 |
myeloid lineage restricted progenitor cell | 2.62e-30 | 66 |
granulocyte monocyte progenitor cell | 1.10e-29 | 67 |
leukocyte | 2.20e-29 | 136 |
monopoietic cell | 1.42e-28 | 59 |
monocyte | 1.42e-28 | 59 |
monoblast | 1.42e-28 | 59 |
promonocyte | 1.42e-28 | 59 |
macrophage dendritic cell progenitor | 2.70e-27 | 61 |
hematopoietic lineage restricted progenitor cell | 2.67e-24 | 120 |
nongranular leukocyte | 2.90e-24 | 115 |
mesenchymal cell | 3.46e-21 | 354 |
hematopoietic stem cell | 1.25e-20 | 168 |
connective tissue cell | 2.59e-20 | 361 |
hematopoietic cell | 9.43e-20 | 177 |
myeloid cell | 1.05e-19 | 108 |
common myeloid progenitor | 1.05e-19 | 108 |
motile cell | 2.69e-19 | 386 |
hematopoietic oligopotent progenitor cell | 3.36e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.36e-19 | 161 |
multi fate stem cell | 9.98e-15 | 427 |
somatic stem cell | 3.40e-14 | 433 |
stem cell | 3.93e-14 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.11e-28 | 76 |
bone element | 1.22e-26 | 82 |
skeletal element | 3.47e-23 | 90 |
hematopoietic system | 1.62e-21 | 98 |
blood island | 1.62e-21 | 98 |
connective tissue | 1.11e-20 | 371 |
immune system | 1.31e-20 | 93 |
skeletal system | 1.15e-19 | 100 |
hemolymphoid system | 2.13e-18 | 108 |
lateral plate mesoderm | 1.22e-10 | 203 |
musculoskeletal system | 1.49e-10 | 167 |