FFCP PHASE1:Mm9::chr5:144131783..144131797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170935 | |EntrezGene=170935 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q0QWG9 | |UniProt=Q0QWG9 | ||
|association_with_transcript=12bp_to_ENSMUST00000120825,uc009akf.1_5end | |association_with_transcript=12bp_to_ENSMUST00000120825,uc009akf.1_5end | ||
|cluster_id=chr5:144131783..144131797,+ | |||
|description=CAGE_peak_2_at_Grid2ip_5end | |description=CAGE_peak_2_at_Grid2ip_5end | ||
|id=chr5:144131783..144131797,+ | |id=chr5:144131783..144131797,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.21e-11,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!1.11e-16!12;UBERON:0003057!1.11e-16!12;UBERON:0001017!1.38e-11!73;UBERON:0005743!1.38e-11!73;UBERON:0004733!2.66e-11!6;UBERON:0004732!2.66e-11!6;UBERON:0002028!2.66e-11!6;UBERON:0007277!2.66e-11!6;UBERON:0000073!3.80e-11!75;UBERON:0001016!3.80e-11!75;UBERON:0001049!4.50e-11!52;UBERON:0005068!4.50e-11!52;UBERON:0006241!4.50e-11!52;UBERON:0007135!4.50e-11!52;UBERON:0000955!2.34e-10!50;UBERON:0006238!2.34e-10!50;UBERON:0004121!1.17e-09!102;UBERON:0000924!1.17e-09!102;UBERON:0006601!1.17e-09!102;UBERON:0002346!3.66e-09!71;UBERON:0003075!3.66e-09!71;UBERON:0007284!3.66e-09!71;UBERON:0002616!3.71e-09!49;UBERON:0000033!1.39e-08!63;UBERON:0002298!2.51e-07!6;UBERON:0002240!3.65e-07!6;UBERON:0005174!3.65e-07!6;UBERON:0001137!3.65e-07!6;UBERON:0002037!8.42e-07!4;UBERON:0002680!8.42e-07!4;UBERON:0001895!8.42e-07!4;UBERON:0010092!8.42e-07!4;UBERON:0006215!8.42e-07!4 | |ontology_enrichment_uberon=UBERON:0003076!1.11e-16!12;UBERON:0003057!1.11e-16!12;UBERON:0001017!1.38e-11!73;UBERON:0005743!1.38e-11!73;UBERON:0004733!2.66e-11!6;UBERON:0004732!2.66e-11!6;UBERON:0002028!2.66e-11!6;UBERON:0007277!2.66e-11!6;UBERON:0000073!3.80e-11!75;UBERON:0001016!3.80e-11!75;UBERON:0001049!4.50e-11!52;UBERON:0005068!4.50e-11!52;UBERON:0006241!4.50e-11!52;UBERON:0007135!4.50e-11!52;UBERON:0000955!2.34e-10!50;UBERON:0006238!2.34e-10!50;UBERON:0004121!1.17e-09!102;UBERON:0000924!1.17e-09!102;UBERON:0006601!1.17e-09!102;UBERON:0002346!3.66e-09!71;UBERON:0003075!3.66e-09!71;UBERON:0007284!3.66e-09!71;UBERON:0002616!3.71e-09!49;UBERON:0000033!1.39e-08!63;UBERON:0002298!2.51e-07!6;UBERON:0002240!3.65e-07!6;UBERON:0005174!3.65e-07!6;UBERON:0001137!3.65e-07!6;UBERON:0002037!8.42e-07!4;UBERON:0002680!8.42e-07!4;UBERON:0001895!8.42e-07!4;UBERON:0010092!8.42e-07!4;UBERON:0006215!8.42e-07!4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,7.62e-13,6;UBERON:0004732,7.62e-13,6;UBERON:0002028,7.62e-13,6;UBERON:0007277,7.62e-13,6;UBERON:0004684,1.21e-11,3;UBERON:0002275,1.21e-11,3;UBERON:0003076,3.83e-11,12;UBERON:0003057,3.83e-11,12;UBERON:0001017,2.65e-10,73;UBERON:0001016,5.23e-10,75;UBERON:0002037,2.53e-09,4;UBERON:0002680,2.53e-09,4;UBERON:0001895,2.53e-09,4;UBERON:0010092,2.53e-09,4;UBERON:0006215,2.53e-09,4;UBERON:0000073,4.90e-09,54;UBERON:0000955,5.28e-08,47;UBERON:0006238,5.28e-08,47;UBERON:0004121,9.89e-08,95;UBERON:0000924,9.89e-08,95;UBERON:0006601,9.89e-08,95;UBERON:0001049,3.19e-07,52;UBERON:0005068,3.19e-07,52;UBERON:0006241,3.19e-07,52;UBERON:0007135,3.19e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0.414758449233911,0,0,0.285650984403804,0.662605622854841,0,0,0,0,2.93680877595932,1.68967186581868,0,0,0,1.11673199600552,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,33.6697916563279,30.9981126083913,0,0,0,0,0.748953197024114,0,0.251308704225729,0,0,4.77912502486988,2.27137768294861,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0.414758449233911,0,0,0.285650984403804,0.662605622854841,0,0,0,0,2.93680877595932,1.68967186581868,0,0,0,1.11673199600552,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,33.6697916563279,30.9981126083913,0,0,0,0,0.748953197024114,0,0.251308704225729,0,0,4.77912502486988,2.27137768294861,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900642406448441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p2@Grid2ip | |short_description=p2@Grid2ip | ||
}} | }} |
Latest revision as of 16:58, 25 September 2015
Short description: | p2@Grid2ip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Grid2ip_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 12bp_to_ENSMUST00000120825, uc009akf.1_5end |
EntrezGene: | Grid2ip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.21e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 7.62e-13 | 6 |
segmental subdivision of nervous system | 7.62e-13 | 6 |
hindbrain | 7.62e-13 | 6 |
presumptive hindbrain | 7.62e-13 | 6 |
raphe nuclei | 1.21e-11 | 3 |
reticular formation | 1.21e-11 | 3 |
posterior neural tube | 3.83e-11 | 12 |
chordal neural plate | 3.83e-11 | 12 |
central nervous system | 2.65e-10 | 73 |
nervous system | 5.23e-10 | 75 |
cerebellum | 2.53e-09 | 4 |
regional part of metencephalon | 2.53e-09 | 4 |
metencephalon | 2.53e-09 | 4 |
future metencephalon | 2.53e-09 | 4 |
rhombic lip | 2.53e-09 | 4 |
regional part of nervous system | 4.90e-09 | 54 |
brain | 5.28e-08 | 47 |
future brain | 5.28e-08 | 47 |
ectoderm-derived structure | 9.89e-08 | 95 |
ectoderm | 9.89e-08 | 95 |
presumptive ectoderm | 9.89e-08 | 95 |
neural tube | 3.19e-07 | 52 |
neural rod | 3.19e-07 | 52 |
future spinal cord | 3.19e-07 | 52 |
neural keel | 3.19e-07 | 52 |