FFCP PHASE1:Mm9::chr6:5736930..5736933,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=624 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:5736930..5736933,+ | |||
|description=CAGE_peak_at_chr6:5736930..5736933,+ | |description=CAGE_peak_at_chr6:5736930..5736933,+ | ||
|id=chr6:5736930..5736933,+ | |id=chr6:5736930..5736933,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.52e-09!10;UBERON:0000411!2.52e-09!10;UBERON:0001950!2.52e-09!10;UBERON:0000033!7.75e-08!63;UBERON:0000153!3.44e-07!94;UBERON:0000955!6.06e-07!50;UBERON:0006238!6.06e-07!50 | |ontology_enrichment_uberon=UBERON:0002021!2.52e-09!10;UBERON:0000411!2.52e-09!10;UBERON:0001950!2.52e-09!10;UBERON:0000033!7.75e-08!63;UBERON:0000153!3.44e-07!94;UBERON:0000955!6.06e-07!50;UBERON:0006238!6.06e-07!50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.26e-37,10;UBERON:0000411,4.26e-37,10;UBERON:0001950,4.26e-37,10;UBERON:0002619,1.51e-21,17;UBERON:0000956,2.64e-17,21;UBERON:0001869,2.64e-17,21;UBERON:0000203,2.64e-17,21;UBERON:0003528,1.49e-15,29;UBERON:0002791,1.49e-15,29;UBERON:0001893,1.49e-15,29;UBERON:0002020,4.03e-13,34;UBERON:0000955,1.61e-11,47;UBERON:0006238,1.61e-11,47;UBERON:0002780,2.61e-11,39;UBERON:0001890,2.61e-11,39;UBERON:0006240,2.61e-11,39;UBERON:0003080,5.32e-11,40;UBERON:0002616,1.98e-09,46;UBERON:0003056,8.69e-09,49;UBERON:0001049,3.22e-08,52;UBERON:0005068,3.22e-08,52;UBERON:0006241,3.22e-08,52;UBERON:0007135,3.22e-08,52;UBERON:0000073,7.11e-08,54;UBERON:0001017,5.74e-07,73;UBERON:0001016,9.54e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0.628340120440365,0,0,0,0.127070227073065,0.898743836428936,1.37250180845588,0.251308704225729,0.521472960576829,0,0.41557608911912,0.811206315338788,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0,0,0.175951124163949,0,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,0.841159794256509,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.642202359951168,0,0,0,0,0,0,0,0,0,0,0,0,8.35435422696698,2.41298144854057,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0.741701208042039,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,1.18269287843545,0.469428954583016,0.651021924219751,1.36317147753424,2.41584120826006,0.576060012515731,0.316011120628178,0,0.102710957164827,0.389762468933385,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,4.01026859407578,2.57779773515531,0,0.755393897389701,1.35004500046361,2.2516060161211,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.114870937911227,0.476293691283074,0.463537303779422,0.192909220463705,0,0.147198920134397,1.02860775715625,0.177475806159338,0.476872379894642,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0.628340120440365,0,0,0,0.127070227073065,0.898743836428936,1.37250180845588,0.251308704225729,0.521472960576829,0,0.41557608911912,0.811206315338788,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0,0,0.175951124163949,0,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,0.841159794256509,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.642202359951168,0,0,0,0,0,0,0,0,0,0,0,0,8.35435422696698,2.41298144854057,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0.741701208042039,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,1.18269287843545,0.469428954583016,0.651021924219751,1.36317147753424,2.41584120826006,0.576060012515731,0.316011120628178,0,0.102710957164827,0.389762468933385,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,4.01026859407578,2.57779773515531,0,0.755393897389701,1.35004500046361,2.2516060161211,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.114870937911227,0.476293691283074,0.463537303779422,0.192909220463705,0,0.147198920134397,1.02860775715625,0.177475806159338,0.476872379894642,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0,0 | ||
|short_description=p@chr6:5736930..5736933,+ | |short_description=p@chr6:5736930..5736933,+ | ||
}} | }} |
Latest revision as of 23:59, 5 August 2015
Short description: | p@chr6:5736930..5736933, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:5736930..5736933, + |
Coexpression cluster: | MCL_coexpression_mm9:624 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.26e-37 | 10 |
visual cortex | 4.26e-37 | 10 |
neocortex | 4.26e-37 | 10 |
regional part of cerebral cortex | 1.51e-21 | 17 |
cerebral cortex | 2.64e-17 | 21 |
cerebral hemisphere | 2.64e-17 | 21 |
pallium | 2.64e-17 | 21 |
brain grey matter | 1.49e-15 | 29 |
regional part of telencephalon | 1.49e-15 | 29 |
telencephalon | 1.49e-15 | 29 |
gray matter | 4.03e-13 | 34 |
brain | 1.61e-11 | 47 |
future brain | 1.61e-11 | 47 |
regional part of forebrain | 2.61e-11 | 39 |
forebrain | 2.61e-11 | 39 |
future forebrain | 2.61e-11 | 39 |
anterior neural tube | 5.32e-11 | 40 |
regional part of brain | 1.98e-09 | 46 |
pre-chordal neural plate | 8.69e-09 | 49 |
neural tube | 3.22e-08 | 52 |
neural rod | 3.22e-08 | 52 |
future spinal cord | 3.22e-08 | 52 |
neural keel | 3.22e-08 | 52 |
regional part of nervous system | 7.11e-08 | 54 |
central nervous system | 5.74e-07 | 73 |
nervous system | 9.54e-07 | 75 |