FFCP PHASE1:Hg19::chr10:100995540..100995551,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:100995540..100995551,-
|short_description=p3@HPSE2
|description=CAGE_peak_3_at_HPSE2_5end
|association_with_transcript=67bp_to_uc001kpo.1,uc009xwc.1,uc009...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60495 | |EntrezGene=60495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18374 | |HGNC=18374 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWQ2 | |UniProt=Q8WWQ2 | ||
|association_with_transcript=67bp_to_uc001kpo.1,uc009xwc.1,uc009xwd.1_5end | |||
|cluster_id=chr10:100995540..100995551,- | |||
|description=CAGE_peak_3_at_HPSE2_5end | |||
|id=chr10:100995540..100995551,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.38e-15;1!UBERON:0004874;2.38e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;5.56e-16;1!DOID:8552;7.45e-16;1!DOID:8692;1.34e-11;31!DOID:1036;4.34e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,5.56e-16,1;DOID:8552,7.46e-16,1;DOID:8692,1.22e-11,31;DOID:1240,3.02e-09,39;DOID:1036,4.04e-08,8;DOID:2531,4.71e-07,51;DOID:0060083,4.71e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.31e-39!115;UBERON:0001049!2.04e-19!57;UBERON:0005068!2.04e-19!57;UBERON:0006241!2.04e-19!57;UBERON:0007135!2.04e-19!57;UBERON:0002616!1.53e-16!59;UBERON:0003075!3.24e-14!86;UBERON:0007284!3.24e-14!86;UBERON:0001017!2.28e-13!82;UBERON:0002346!2.33e-13!90;UBERON:0000955!2.82e-13!69;UBERON:0006238!2.82e-13!69;UBERON:0002780!4.99e-13!41;UBERON:0001890!4.99e-13!41;UBERON:0006240!4.99e-13!41;UBERON:0003080!1.18e-12!42;UBERON:0005743!1.55e-12!86;UBERON:0000073!2.83e-12!94;UBERON:0001016!2.83e-12!94;UBERON:0002020!8.30e-12!34;UBERON:0003528!8.30e-12!34;UBERON:0000988!1.13e-11!3;UBERON:0001893!1.20e-11!34;UBERON:0002298!2.01e-11!8;UBERON:0001869!2.14e-10!32;UBERON:0002791!4.66e-10!33;UBERON:0002308!4.93e-10!9;UBERON:0000125!4.93e-10!9;UBERON:0004732!8.34e-10!13;UBERON:0002148!1.50e-08!2;UBERON:0009662!1.50e-08!2;UBERON:0005162!1.67e-08!2;UBERON:0000122!1.67e-08!2;UBERON:0001875!2.09e-08!2;UBERON:0006514!2.09e-08!2;UBERON:0003076!2.50e-08!15;UBERON:0003057!2.50e-08!15;UBERON:0001897!2.81e-08!2;UBERON:0003056!7.29e-08!61;UBERON:0004733!1.67e-07!12;UBERON:0002028!1.67e-07!12;UBERON:0007277!1.67e-07!12;UBERON:0001950!5.35e-07!20;UBERON:0004111!7.83e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;2.38e-15;1!UBERON:0000941;2.38e-15;1!UBERON:0001785;2.38e-15;1!UBERON:0002464;2.38e-15;1!UBERON:0004904;2.38e-15;1!UBERON:0008811;2.38e-15;1!UBERON:0001021;2.38e-15;1!UBERON:0001255;2.48e-08;2!UBERON:0001897;2.48e-08;2!UBERON:0003714;2.48e-08;2!UBERON:0001875;2.48e-08;2!UBERON:0005162;2.48e-08;2!UBERON:0000122;2.48e-08;2!UBERON:0001556;2.48e-08;2!UBERON:0006514;2.48e-08;2!UBERON:0010225;2.48e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,1.54e-15,1;UBERON:0008811,1.54e-15,1;UBERON:0006258,1.54e-15,1;UBERON:0005876,1.54e-15,1;UBERON:0004874,1.54e-15,1;UBERON:0000941,2.38e-15,1;UBERON:0001785,2.38e-15,1;UBERON:0002464,2.38e-15,1;UBERON:0004904,2.38e-15,1;UBERON:0001021,2.38e-15,1;UBERON:0003902,2.38e-15,1;UBERON:0005425,2.38e-15,1;UBERON:0001897,2.31e-08,2;UBERON:0010225,2.31e-08,2;UBERON:0003714,2.48e-08,2;UBERON:0005162,2.48e-08,2;UBERON:0000122,2.48e-08,2;UBERON:0001875,2.67e-08,2;UBERON:0006514,2.67e-08,2;UBERON:0001255,2.87e-08,2;UBERON:0001556,2.87e-08,2;UBERON:0007023,3.51e-07,114 | |||
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| ||
|short_description=p3@HPSE2 | |||
}} | }} |
Latest revision as of 18:25, 15 September 2015
Short description: | p3@HPSE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HPSE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 67bp_to_uc001kpo.1, uc009xwc.1, uc009xwd.1_5end |
EntrezGene: | HPSE2 |
HGNC: | 18374 |
UniProt: | Q8WWQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
penis | 1.54e-15 | 1 |
intromittent organ | 1.54e-15 | 1 |
lateral plate mesenchyme | 1.54e-15 | 1 |
undifferentiated genital tubercle | 1.54e-15 | 1 |
somatopleure | 1.54e-15 | 1 |
cranial nerve II | 2.38e-15 | 1 |
cranial nerve | 2.38e-15 | 1 |
nerve trunk | 2.38e-15 | 1 |
nerve connecting eye with brain | 2.38e-15 | 1 |
nerve | 2.38e-15 | 1 |
retinal neural layer | 2.38e-15 | 1 |
presumptive neural retina | 2.38e-15 | 1 |
dorsal plus ventral thalamus | 2.31e-08 | 2 |
thalamic complex | 2.31e-08 | 2 |
neural tissue | 2.48e-08 | 2 |
multi cell component structure | 2.48e-08 | 2 |
neuron projection bundle | 2.48e-08 | 2 |
globus pallidus | 2.67e-08 | 2 |
pallidum | 2.67e-08 | 2 |
urinary bladder | 2.87e-08 | 2 |
lower urinary tract | 2.87e-08 | 2 |
adult organism | 3.51e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 5.56e-16 | 1 |
chronic myeloid leukemia | 7.46e-16 | 1 |
myeloid leukemia | 1.22e-11 | 31 |
leukemia | 3.02e-09 | 39 |
chronic leukemia | 4.04e-08 | 8 |
hematologic cancer | 4.71e-07 | 51 |
immune system cancer | 4.71e-07 | 51 |