FFCP PHASE1:Mm9::chr7:118172475..118172486,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22083 | |EntrezGene=22083 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q62018,Q05CJ7 | |UniProt=Q62018,Q05CJ7 | ||
|association_with_transcript=10bp_to_ENSMUST00000005749,ENSMUST00000098103,NM_009431,uc009jfw.1,uc009jfx.1_5end | |association_with_transcript=10bp_to_ENSMUST00000005749,ENSMUST00000098103,NM_009431,uc009jfw.1,uc009jfx.1_5end | ||
|cluster_id=chr7:118172475..118172486,+ | |||
|description=CAGE_peak_2_at_Ctr9_5end | |description=CAGE_peak_2_at_Ctr9_5end | ||
|id=chr7:118172475..118172486,+ | |id=chr7:118172475..118172486,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.36e-07!23;CL:0000337!1.36e-07!23 | |ontology_enrichment_celltype=CL:0000117!1.36e-07!23;CL:0000337!1.36e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-07,23;CL:0000337,1.36e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!4.17e-17!94;UBERON:0007811!6.58e-17!86;UBERON:0000033!2.82e-14!63;UBERON:0003056!1.55e-13!49;UBERON:0000955!3.94e-13!50;UBERON:0006238!3.94e-13!50;UBERON:0002616!1.47e-12!49;UBERON:0002346!2.00e-12!71;UBERON:0003075!2.00e-12!71;UBERON:0007284!2.00e-12!71;UBERON:0001049!1.27e-11!52;UBERON:0005068!1.27e-11!52;UBERON:0006241!1.27e-11!52;UBERON:0007135!1.27e-11!52;UBERON:0003080!1.94e-11!40;UBERON:0002780!3.06e-11!39;UBERON:0001890!3.06e-11!39;UBERON:0006240!3.06e-11!39;UBERON:0004121!3.64e-11!102;UBERON:0000924!3.64e-11!102;UBERON:0006601!3.64e-11!102;UBERON:0002791!6.21e-10!29;UBERON:0003528!6.21e-10!29;UBERON:0001893!6.21e-10!29;UBERON:0001017!1.01e-09!73;UBERON:0005743!1.01e-09!73;UBERON:0002020!1.19e-09!34;UBERON:0000073!8.54e-09!75;UBERON:0001016!8.54e-09!75;UBERON:0000468!2.24e-08!333;UBERON:0000922!1.56e-07!328;UBERON:0000956!5.00e-07!21;UBERON:0001869!5.00e-07!21;UBERON:0000203!5.00e-07!21 | |ontology_enrichment_uberon=UBERON:0000153!4.17e-17!94;UBERON:0007811!6.58e-17!86;UBERON:0000033!2.82e-14!63;UBERON:0003056!1.55e-13!49;UBERON:0000955!3.94e-13!50;UBERON:0006238!3.94e-13!50;UBERON:0002616!1.47e-12!49;UBERON:0002346!2.00e-12!71;UBERON:0003075!2.00e-12!71;UBERON:0007284!2.00e-12!71;UBERON:0001049!1.27e-11!52;UBERON:0005068!1.27e-11!52;UBERON:0006241!1.27e-11!52;UBERON:0007135!1.27e-11!52;UBERON:0003080!1.94e-11!40;UBERON:0002780!3.06e-11!39;UBERON:0001890!3.06e-11!39;UBERON:0006240!3.06e-11!39;UBERON:0004121!3.64e-11!102;UBERON:0000924!3.64e-11!102;UBERON:0006601!3.64e-11!102;UBERON:0002791!6.21e-10!29;UBERON:0003528!6.21e-10!29;UBERON:0001893!6.21e-10!29;UBERON:0001017!1.01e-09!73;UBERON:0005743!1.01e-09!73;UBERON:0002020!1.19e-09!34;UBERON:0000073!8.54e-09!75;UBERON:0001016!8.54e-09!75;UBERON:0000468!2.24e-08!333;UBERON:0000922!1.56e-07!328;UBERON:0000956!5.00e-07!21;UBERON:0001869!5.00e-07!21;UBERON:0000203!5.00e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.53e-13,73;UBERON:0003056,1.66e-13,49;UBERON:0002346,9.57e-13,64;UBERON:0003075,9.57e-13,64;UBERON:0007284,9.57e-13,64;UBERON:0000073,1.86e-12,54;UBERON:0000955,3.92e-12,47;UBERON:0006238,3.92e-12,47;UBERON:0001049,1.39e-11,52;UBERON:0005068,1.39e-11,52;UBERON:0006241,1.39e-11,52;UBERON:0007135,1.39e-11,52;UBERON:0002616,1.43e-11,46;UBERON:0003080,2.08e-11,40;UBERON:0002780,3.29e-11,39;UBERON:0001890,3.29e-11,39;UBERON:0006240,3.29e-11,39;UBERON:0004121,3.79e-11,95;UBERON:0000924,3.79e-11,95;UBERON:0006601,3.79e-11,95;UBERON:0010314,6.54e-10,92;UBERON:0003528,6.72e-10,29;UBERON:0002791,6.72e-10,29;UBERON:0001893,6.72e-10,29;UBERON:0001017,1.07e-09,73;UBERON:0002020,1.28e-09,34;UBERON:0001016,9.08e-09,75;UBERON:0000922,8.23e-08,320;UBERON:0000956,5.39e-07,21;UBERON:0001869,5.39e-07,21;UBERON:0000203,5.39e-07,21 | |||
|phase1_expression=5.44506080156299,2.09385244583617,1.81999695755814,3.0246421130683,2.50447864973174,2.68606835059024,3.03696432774183,5.81054955487093,2.111830832275,3.5109678948299,2.91070545983358,4.78632953972018,4.79362043807376,6.90621179110079,3.66420737997229,4.25198061518635,3.49780939064073,5.99378114180652,3.70208970735495,3.81950686618227,6.29320347117916,3.17731043842833,3.13439746966722,1.43993180514066,2.98232065387321,1.72269589234506,1.7230479846363,1.939241094173,1.90023419456374,4.78857246543868,1.99557459589774,0.635030673459631,4.30545351309199,0,5.19932915552294,4.15586613396231,3.06254034393554,2.51118978442145,1.5626706890476,2.09409497589519,2.35292595212406,2.73218193983378,1.94204141212461,4.40638862914521,4.76471576731718,4.22157529971868,2.34717403304412,0.65407546914134,1.09843091367236,0.972149495371417,2.37976916763116,0,1.67782606057736,2.90144856804538,2.68875039313971,2.31533492432352,2.0057340795713,1.54701627683233,9.91350658212029,8.46385566835253,3.1691570175309,1.0165335962074,1.77858959222228,0,0.988866362566974,1.4209602298922,0.599200221036809,0.768436610643109,12.0279950277834,12.5555522648472,10.3059231062177,4.57041575046086,3.09215957332259,12.0040983230655,13.5142114135713,6.43453150627015,8.8092704799511,6.51205424234457,4.6081959976873,7.38563211289086,10.5210790142771,9.89735404057844,5.58365998002762,4.50210088025344,5.34793867218835,2.94628585473668,6.83384067835694,8.76077395378913,2.72614295999463,1.81371744256285,4.34796733052517,4.30211938490693,2.03991400112325,2.15881276655127,4.54843492213368,1.34408066129201,3.7919993435573,2.21559419351475,1.81850203222008,1.41335829804136,4.50698943285378,3.84979432242953,7.64415719119937,0,1.08245520505607,1.52015919285059,1.51657333504435,3.76806803072898,4.91981978929626,3.56261133755579,4.68410382268567,5.1759131313064,4.61230994512117,3.76806601381556,4.70354828542819,4.39833069653864,7.16865406429684,4.33798070759735,6.19227386364912,4.52947179852746,3.09178125844551,4.84875253135222,0,8.49064311333487,7.74952815209784,2.04365644166873,1.91704199209472,1.79970819298022,1.65191295194984,5.39246301857362,6.40500843946077,12.4397808591736,6.43149984711423,7.41574826257959,4.98691306942944,7.78758062725237,3.66621709861139,3.11017426525233,3.53811861807145,5.26104639716185,5.07469727554544,5.28774840196988,5.22180176435513,5.72678307775717,5.17077393550092,5.63700369253339,5.80950692270319,8.01980449290949,4.095791865724,3.78212160335639,5.10258260075452,4.82230611340665,3.89266148915837,5.2237824978325,5.14455341019859,4.77682240364384,0.702213187313235,1.80143534980301,0.568326998791185,2.27838349789052,4.45599513964083,5.04173772090842,4.7348947117042,4.32881309844288,4.47374627373397,3.95307706075693,4.29237442239391,3.73649095574942,4.11399624783701,3.94001913789829,4.2155780963845,6.14039947186396,5.26920276698522,3.75777972529041,9.67333763394985,10.9078889122042,2.97376904685418,1.85115396664481,3.62590025909898,4.64473343720877,3.60828891701861,3.63030344322017,3.11329261382818,3.04361001780095,0.949058123089023,2.47048432086016,3.77002813200404,3.58121649674071,3.31438948102504,5.39291645192533,3.02593269824572,2.58883655230677,2.27601481143698,3.08470984046268,5.63538678365402,4.2766778847516,2.90928730751439,3.50679099451593,5.43834219268613,3.83786384746966,4.23896565171712,2.22114895059241,2.96452627087149,4.17112764290235,3.53806191203765,5.8464149220062,5.68008339887808,3.37648023653384,2.29163266603278,1.15078454980324,2.91843408195064,3.0201755450689,4.31304619582064,2.97712758134803,2.18426371180192,2.52578877947112,2.15276896226295,2.41221760681684,2.95605104266567,5.87423376488503,4.23708938749267,5.7713329163564,5.39787571063555,4.69017520837084,4.04674189506223,3.51240566144038,5.67486518782288,3.5434350343804,7.01600982092943,4.09658286789345,4.31712454664739,3.47157740595628,0,0.54390568381871,1.96705709207614,3.31124095565679,6.10092241953609,7.3843362553088,2.45902418065013,3.53459298086122,2.52406575533005,4.29482618726302,3.66219776145758,5.01834475700359,3.7875774594007,4.52922449262132,4.85772842009873,2.92255857911312,4.34816555741176,8.9969968598106,4.11626247103979,5.1639025063504,4.72372182125371,3.95928295134085,0,5.34117399540959,4.53485335447127,3.58349651536206,3.2483208216885,3.07435147943927,2.58428293168221,4.36240475373007,3.92147116223193,6.63677191665214,1.05418608574999,2.06271086496374,6.12791290356818,6.48219938512717,3.88076051348264,6.21577401591618,4.96552654198366,4.45922044005176,5.59466670047211,4.26250928760439,2.3467170806371,7.62595455109753,3.74898276693435,5.60613260001032,5.8127193610526,7.05661221659424,5.96861720015682,5.41664969158702,2.62332752966866,4.82105785227325,2.73393409276564,5.36605856704379,2.40752885580625,3.01389531207506,3.55404992074665,3.66045077130436,1.01987057996313,2.79902904647316,1.93479963326193,0.954670618015114,4.27053591334533,4.67634774391752,4.21220829205025,5.01811910434725,2.83871332870031,4.18079473792944,2.89287095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|phase1_expression=5.44506080156299,2.09385244583617,1.81999695755814,3.0246421130683,2.50447864973174,2.68606835059024,3.03696432774183,5.81054955487093,2.111830832275,3.5109678948299,2.91070545983358,4.78632953972018,4.79362043807376,6.90621179110079,3.66420737997229,4.25198061518635,3.49780939064073,5.99378114180652,3.70208970735495,3.81950686618227,6.29320347117916,3.17731043842833,3.13439746966722,1.43993180514066,2.98232065387321,1.72269589234506,1.7230479846363,1.939241094173,1.90023419456374,4.78857246543868,1.99557459589774,0.635030673459631,4.30545351309199,0,5.19932915552294,4.15586613396231,3.06254034393554,2.51118978442145,1.5626706890476,2.09409497589519,2.35292595212406,2.73218193983378,1.94204141212461,4.40638862914521,4.76471576731718,4.22157529971868,2.34717403304412,0.65407546914134,1.09843091367236,0.972149495371417,2.37976916763116,0,1.67782606057736,2.90144856804538,2.68875039313971,2.31533492432352,2.0057340795713,1.54701627683233,9.91350658212029,8.46385566835253,3.1691570175309,1.0165335962074,1.77858959222228,0,0.988866362566974,1.4209602298922,0.599200221036809,0.768436610643109,12.0279950277834,12.5555522648472,10.3059231062177,4.57041575046086,3.09215957332259,12.0040983230655,13.5142114135713,6.43453150627015,8.8092704799511,6.51205424234457,4.6081959976873,7.38563211289086,10.5210790142771,9.89735404057844,5.58365998002762,4.50210088025344,5.34793867218835,2.94628585473668,6.83384067835694,8.76077395378913,2.72614295999463,1.81371744256285,4.34796733052517,4.30211938490693,2.03991400112325,2.15881276655127,4.54843492213368,1.34408066129201,3.7919993435573,2.21559419351475,1.81850203222008,1.41335829804136,4.50698943285378,3.84979432242953,7.64415719119937,0,1.08245520505607,1.52015919285059,1.51657333504435,3.76806803072898,4.91981978929626,3.56261133755579,4.68410382268567,5.1759131313064,4.61230994512117,3.76806601381556,4.70354828542819,4.39833069653864,7.16865406429684,4.33798070759735,6.19227386364912,4.52947179852746,3.09178125844551,4.84875253135222,0,8.49064311333487,7.74952815209784,2.04365644166873,1.91704199209472,1.79970819298022,1.65191295194984,5.39246301857362,6.40500843946077,12.4397808591736,6.43149984711423,7.41574826257959,4.98691306942944,7.78758062725237,3.66621709861139,3.11017426525233,3.53811861807145,5.26104639716185,5.07469727554544,5.28774840196988,5.22180176435513,5.72678307775717,5.17077393550092,5.63700369253339,5.80950692270319,8.01980449290949,4.095791865724,3.78212160335639,5.10258260075452,4.82230611340665,3.89266148915837,5.2237824978325,5.14455341019859,4.77682240364384,0.702213187313235,1.80143534980301,0.568326998791185,2.27838349789052,4.45599513964083,5.04173772090842,4.7348947117042,4.32881309844288,4.47374627373397,3.95307706075693,4.29237442239391,3.73649095574942,4.11399624783701,3.94001913789829,4.2155780963845,6.14039947186396,5.26920276698522,3.75777972529041,9.67333763394985,10.9078889122042,2.97376904685418,1.85115396664481,3.62590025909898,4.64473343720877,3.60828891701861,3.63030344322017,3.11329261382818,3.04361001780095,0.949058123089023,2.47048432086016,3.77002813200404,3.58121649674071,3.31438948102504,5.39291645192533,3.02593269824572,2.58883655230677,2.27601481143698,3.08470984046268,5.63538678365402,4.2766778847516,2.90928730751439,3.50679099451593,5.43834219268613,3.83786384746966,4.23896565171712,2.22114895059241,2.96452627087149,4.17112764290235,3.53806191203765,5.8464149220062,5.68008339887808,3.37648023653384,2.29163266603278,1.15078454980324,2.91843408195064,3.0201755450689,4.31304619582064,2.97712758134803,2.18426371180192,2.52578877947112,2.15276896226295,2.41221760681684,2.95605104266567,5.87423376488503,4.23708938749267,5.7713329163564,5.39787571063555,4.69017520837084,4.04674189506223,3.51240566144038,5.67486518782288,3.5434350343804,7.01600982092943,4.09658286789345,4.31712454664739,3.47157740595628,0,0.54390568381871,1.96705709207614,3.31124095565679,6.10092241953609,7.3843362553088,2.45902418065013,3.53459298086122,2.52406575533005,4.29482618726302,3.66219776145758,5.01834475700359,3.7875774594007,4.52922449262132,4.85772842009873,2.92255857911312,4.34816555741176,8.9969968598106,4.11626247103979,5.1639025063504,4.72372182125371,3.95928295134085,0,5.34117399540959,4.53485335447127,3.58349651536206,3.2483208216885,3.07435147943927,2.58428293168221,4.36240475373007,3.92147116223193,6.63677191665214,1.05418608574999,2.06271086496374,6.12791290356818,6.48219938512717,3.88076051348264,6.21577401591618,4.96552654198366,4.45922044005176,5.59466670047211,4.26250928760439,2.3467170806371,7.62595455109753,3.74898276693435,5.60613260001032,5.8127193610526,7.05661221659424,5.96861720015682,5.41664969158702,2.62332752966866,4.82105785227325,2.73393409276564,5.36605856704379,2.40752885580625,3.01389531207506,3.55404992074665,3.66045077130436,1.01987057996313,2.79902904647316,1.93479963326193,0.954670618015114,4.27053591334533,4.67634774391752,4.21220829205025,5.01811910434725,2.83871332870031,4.18079473792944,2.89287095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| ||
|short_description=p2@Ctr9 | |short_description=p2@Ctr9 | ||
}} | }} |
Latest revision as of 17:43, 25 September 2015
Short description: | p2@Ctr9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ctr9_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENSMUST00000005749, ENSMUST00000098103, NM_009431, uc009jfw.1, uc009jfx.1_5end |
EntrezGene: | Ctr9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.36e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.36e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.53e-13 | 73 |
pre-chordal neural plate | 1.66e-13 | 49 |
neurectoderm | 9.57e-13 | 64 |
neural plate | 9.57e-13 | 64 |
presumptive neural plate | 9.57e-13 | 64 |
regional part of nervous system | 1.86e-12 | 54 |
brain | 3.92e-12 | 47 |
future brain | 3.92e-12 | 47 |
neural tube | 1.39e-11 | 52 |
neural rod | 1.39e-11 | 52 |
future spinal cord | 1.39e-11 | 52 |
neural keel | 1.39e-11 | 52 |
regional part of brain | 1.43e-11 | 46 |
anterior neural tube | 2.08e-11 | 40 |
regional part of forebrain | 3.29e-11 | 39 |
forebrain | 3.29e-11 | 39 |
future forebrain | 3.29e-11 | 39 |
ectoderm-derived structure | 3.79e-11 | 95 |
ectoderm | 3.79e-11 | 95 |
presumptive ectoderm | 3.79e-11 | 95 |
structure with developmental contribution from neural crest | 6.54e-10 | 92 |
brain grey matter | 6.72e-10 | 29 |
regional part of telencephalon | 6.72e-10 | 29 |
telencephalon | 6.72e-10 | 29 |
central nervous system | 1.07e-09 | 73 |
gray matter | 1.28e-09 | 34 |
nervous system | 9.08e-09 | 75 |
embryo | 8.23e-08 | 320 |
cerebral cortex | 5.39e-07 | 21 |
cerebral hemisphere | 5.39e-07 | 21 |
pallium | 5.39e-07 | 21 |