FFCP PHASE1:Hg19::chr10:111765684..111765732,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:111765684..111765732,+
|short_description=p3@ADD3
|description=CAGE_peak_3_at_ADD3_5end
|association_with_transcript=0bp_to_NM_019903,uc001kys.3_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=120 | |EntrezGene=120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=245 | |HGNC=245 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UEY8 | |UniProt=Q9UEY8 | ||
|association_with_transcript=0bp_to_NM_019903,uc001kys.3_5end | |||
|cluster_id=chr10:111765684..111765732,+ | |||
|coexpression_cluster_id=C2034 | |||
|description=CAGE_peak_3_at_ADD3_5end | |||
|id=chr10:111765684..111765732,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.47e-30!180;CL:0000057!3.62e-19!75;CL:0000680!2.07e-15!57;CL:0000056!2.07e-15!57;CL:0000355!2.07e-15!57;CL:0000187!4.30e-14!54;CL:0000183!3.74e-13!59;CL:0000393!6.14e-12!60;CL:0000211!6.14e-12!60;CL:0000192!4.52e-11!42;CL:0000514!4.52e-11!42;CL:0000359!1.60e-09!32;CL:0002620!8.51e-08!23;CL:0002334!1.76e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.57e-09;32!CL:0000192;8.45e-09;43!CL:0000187;2.14e-08;55!CL:0002620;2.97e-08;23!CL:0002334;6.13e-08;12!CL:0000057;8.28e-08;73!CL:0000393;3.77e-07;61!CL:0000211;3.77e-07;61!CL:0002494;6.01e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.80e-20,76;CL:0000680,4.13e-16,58;CL:0000056,4.13e-16,58;CL:0000355,4.13e-16,58;CL:0000187,1.05e-14,55;CL:0000393,4.20e-12,61;CL:0000211,4.20e-12,61;CL:0000192,1.84e-11,43;CL:0000514,1.84e-11,43;CL:0000359,1.03e-09,32;CL:0002620,2.85e-08,23;CL:0002334,6.23e-08,12;CL:0002494,5.86e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;8.45e-09;43!CL:0000355;1.02e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.02e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.33e-19!365;UBERON:0000914!1.03e-18!83;UBERON:0002329!1.03e-18!83;UBERON:0003077!1.03e-18!83;UBERON:0003059!1.03e-18!83;UBERON:0007282!1.03e-18!83;UBERON:0009618!1.03e-18!83;UBERON:0007285!1.03e-18!83;UBERON:0004290!9.62e-17!70;UBERON:0002385!1.26e-16!63;UBERON:0001015!1.26e-16!63;UBERON:0000383!1.26e-16!63;UBERON:0001134!3.62e-16!61;UBERON:0002036!3.62e-16!61;UBERON:0003082!3.62e-16!61;UBERON:0007023!1.22e-15!115;UBERON:0000481!3.46e-14!347;UBERON:0000486!2.03e-13!82;UBERON:0000468!6.89e-13!659;UBERON:0000119!3.22e-11!312;UBERON:0002616!7.25e-11!59;UBERON:0000483!1.12e-10!309;UBERON:0005256!2.73e-10!143;UBERON:0000477!3.00e-10!286;UBERON:0001049!3.27e-10!57;UBERON:0005068!3.27e-10!57;UBERON:0006241!3.27e-10!57;UBERON:0007135!3.27e-10!57;UBERON:0001017!1.44e-09!82;UBERON:0000467!2.47e-09!625;UBERON:0000955!3.15e-09!69;UBERON:0006238!3.15e-09!69;UBERON:0003080!3.69e-09!42;UBERON:0000480!3.83e-09!626;UBERON:0007100!4.01e-09!27;UBERON:0000948!4.27e-09!24;UBERON:0005498!4.27e-09!24;UBERON:0004140!4.27e-09!24;UBERON:0009881!4.27e-09!24;UBERON:0004141!4.27e-09!24;UBERON:0003084!4.27e-09!24;UBERON:0007005!4.27e-09!24;UBERON:0004139!4.27e-09!24;UBERON:0004291!4.27e-09!24;UBERON:0002780!5.19e-09!41;UBERON:0001890!5.19e-09!41;UBERON:0006240!5.19e-09!41;UBERON:0005743!8.11e-09!86;UBERON:0000073!9.60e-09!94;UBERON:0001016!9.60e-09!94;UBERON:0004872!1.15e-08!84;UBERON:0004111!1.16e-08!241;UBERON:0004573!1.55e-08!33;UBERON:0004571!1.55e-08!33;UBERON:0000025!1.73e-08!194;UBERON:0000033!2.92e-08!123;UBERON:0000153!3.74e-08!129;UBERON:0007811!3.74e-08!129;UBERON:0004121!4.60e-08!169;UBERON:0001893!4.74e-08!34;UBERON:0003075!5.62e-08!86;UBERON:0007284!5.62e-08!86;UBERON:0002020!5.95e-08!34;UBERON:0003528!5.95e-08!34;UBERON:0002791!6.34e-08!33;UBERON:0000924!1.02e-07!173;UBERON:0006601!1.02e-07!173;UBERON:0001869!1.17e-07!32;UBERON:0001637!1.66e-07!42;UBERON:0003509!1.66e-07!42;UBERON:0004572!1.66e-07!42;UBERON:0000479!1.75e-07!787;UBERON:0002346!2.01e-07!90;UBERON:0000922!2.43e-07!612;UBERON:0002100!5.10e-07!216;UBERON:0002050!6.41e-07!605;UBERON:0005423!6.41e-07!605;UBERON:0003102!8.18e-07!95;UBERON:0000923!9.77e-07!604;UBERON:0005291!9.77e-07!604;UBERON:0006598!9.77e-07!604;UBERON:0002532!9.77e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.81e-10;31!UBERON:0001015;2.81e-10;31!UBERON:0000383;2.81e-10;31!UBERON:0007100;7.54e-09;25!UBERON:0000948;8.10e-09;22!UBERON:0004573;9.06e-08;33!UBERON:0004571;9.06e-08;33!UBERON:0002791;3.21e-07;32!UBERON:0001869;3.47e-07;32!UBERON:0001893;3.54e-07;34!UBERON:0002780;3.59e-07;41!UBERON:0001890;3.59e-07;41!UBERON:0003528;4.15e-07;34!UBERON:0002020;4.15e-07;34!UBERON:0002204;4.63e-07;70!UBERON:0001013;5.22e-07;14 | |||
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| ||
|short_description=p3@ADD3 | |||
}} | }} |
Latest revision as of 07:43, 16 September 2015
Short description: | p3@ADD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ADD3_5end |
Coexpression cluster: | C2034_mesenchymal_Synoviocyte_Fibroblast_Preadipocyte_Nucleus_Cardiac_Smooth |
Association with transcript: | 0bp_to_NM_019903, uc001kys.3_5end |
EntrezGene: | ADD3 |
HGNC: | 245 |
UniProt: | Q9UEY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.80e-20 | 76 |
muscle precursor cell | 4.13e-16 | 58 |
myoblast | 4.13e-16 | 58 |
multi-potent skeletal muscle stem cell | 4.13e-16 | 58 |
muscle cell | 1.05e-14 | 55 |
electrically responsive cell | 4.20e-12 | 61 |
electrically active cell | 4.20e-12 | 61 |
smooth muscle cell | 1.84e-11 | 43 |
smooth muscle myoblast | 1.84e-11 | 43 |
vascular associated smooth muscle cell | 1.03e-09 | 32 |
skin fibroblast | 2.85e-08 | 23 |
preadipocyte | 6.23e-08 | 12 |
cardiocyte | 5.86e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.02e-07 | 14 |