FFCP PHASE1:Hg19::chr11:118491505..118491550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:118491505..118491550,+ | |||
|description=CAGE_peak_at_chr11:118491505..118491550,+ | |description=CAGE_peak_at_chr11:118491505..118491550,+ | ||
|id=chr11:118491505..118491550,+ | |id=chr11:118491505..118491550,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.35e-09!254;CL:0000077!2.97e-08!19;CL:0000213!4.75e-08!57;CL:0000215!4.75e-08!57;CL:0000220!3.23e-07!246;CL:0002321!4.43e-07!248;CL:0000222!5.51e-07!119 | |ontology_enrichment_celltype=CL:0000066!5.35e-09!254;CL:0000077!2.97e-08!19;CL:0000213!4.75e-08!57;CL:0000215!4.75e-08!57;CL:0000220!3.23e-07!246;CL:0002321!4.43e-07!248;CL:0000222!5.51e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000077;9.15e-15;19!CL:0000213;3.13e-10;58!CL:0000215;3.13e-10;58!CL:1000413;5.95e-09;9!CL:0002139;2.84e-08;24!CL:0000039;1.28e-07;7!CL:0000586;1.28e-07;7!CL:0000071;1.75e-07;18!CL:0000076;4.82e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,8.81e-17,58;CL:0000215,8.81e-17,58;CL:0000077,1.70e-15,19;CL:0000066,5.53e-13,253;CL:0000076,7.25e-12,63;CL:0002321,9.67e-10,250;CL:1000413,8.72e-09,9;CL:0000222,1.51e-08,121;CL:0002139,3.29e-08,24;CL:0000039,1.49e-07,7;CL:0000586,1.49e-07,7;CL:0000071,1.81e-07,18;CL:0002546,1.81e-07,18;CL:0000115,9.38e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;1.75e-07;18 | |||
|ontology_enrichment_disease=DOID:14566!3.72e-09!239;DOID:162!4.58e-09!235;DOID:0050687!1.38e-07!143;DOID:193!6.67e-07!29 | |ontology_enrichment_disease=DOID:14566!3.72e-09!239;DOID:162!4.58e-09!235;DOID:0050687!1.38e-07!143;DOID:193!6.67e-07!29 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.21e-14,239;DOID:162,7.69e-14,235;DOID:0050687,1.95e-10,143;DOID:305,8.43e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.55e-09!118;UBERON:0000055!4.51e-09!69;UBERON:0001981!1.27e-08!60;UBERON:0007500!1.27e-08!60;UBERON:0004537!1.27e-08!60;UBERON:0006965!1.27e-08!60;UBERON:0001637!2.74e-08!42;UBERON:0003509!2.74e-08!42;UBERON:0004572!2.74e-08!42;UBERON:0002049!3.28e-08!79;UBERON:0007798!3.28e-08!79;UBERON:0004872!3.94e-08!84;UBERON:0004573!3.67e-07!33;UBERON:0004571!3.67e-07!33;UBERON:0004535!6.06e-07!110 | |ontology_enrichment_uberon=UBERON:0003914!1.55e-09!118;UBERON:0000055!4.51e-09!69;UBERON:0001981!1.27e-08!60;UBERON:0007500!1.27e-08!60;UBERON:0004537!1.27e-08!60;UBERON:0006965!1.27e-08!60;UBERON:0001637!2.74e-08!42;UBERON:0003509!2.74e-08!42;UBERON:0004572!2.74e-08!42;UBERON:0002049!3.28e-08!79;UBERON:0007798!3.28e-08!79;UBERON:0004872!3.94e-08!84;UBERON:0004573!3.67e-07!33;UBERON:0004571!3.67e-07!33;UBERON:0004535!6.06e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0003915;5.95e-09;9!UBERON:0004700;5.95e-09;9!UBERON:0001917;5.95e-09;9!UBERON:0004638;1.75e-07;18!UBERON:0001986;1.75e-07;18!UBERON:0004852;1.75e-07;18!UBERON:0000487;8.94e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,8.72e-09,9;UBERON:0004700,8.72e-09,9;UBERON:0001917,8.72e-09,9;UBERON:0004638,1.81e-07,18;UBERON:0001986,1.81e-07,18;UBERON:0004852,1.81e-07,18 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0,0,0,0,0.783556884599516,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0.408001382488506,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.411167888021826,1.23882548358041,0.575384784644301,1.0246428261164,0.709446689665756,0.344745680736619,1.93645405075148,0,0.188242339542605,0.545812300115692,0.674170453335254,0.918251677112708,1.60464513538047,0.639337125799041,0,0.199463657621632,0.426224750532694,0.290209238628584,0,1.24564449799115,0,1.0429658368404,0.868755378820466,1.21079900526674,2.94622108790052,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0,0.175669571386252,0.327447688744282,0,0,0,0,0.26591592103773,0,0,0,2.38514888840046,1.72046919021225,2.42998351125316,1.13061588384802,2.09749718104953,1.92582629358047,1.04497483268405,1.03366703667732,1.42306505074684,1.33888245105868,0.805658634218294,0,0.24406205754817,1.10298924103761,0.81014194788176,0.357198913136319,0,0.112611480483322,4.5994991239765,2.84779697870439,1.46561395144326,0,0,0,1.49091585508596,0.12663051166458,0.794455084879313,0.286836620748814,0.354668382198357,1.12135520028461,3.20246987189115,1.2333377420858,0.311211035399766,0.538842688278752,0.653847612453835,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0.277064115484183,0,0.612975591598039,0.150238058906597,0.680593098960126,0,0,0.211931901159562,0,0,0,0.18611685633159,0.506328996723799,0.876933046450788,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.591534000199219,0.505754070234305,0.482022059766964,0.55146986366197,1.52515610864684,0.474541238222193,0.404493924480493,0.98110732562673,0.38474715694639,0,1.40241773803446,0.8231480226628,0,0,0,0,0,1.22988438543114,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0.246217006087397,0.702012795417713,0.445893486866185,0,0,0,0.806026704325635,0.581267877027924,0,2.46331618947972,0.792435906119034,0,0,0.12624243342638,0.63497894292169,2.29193055334967,2.34434894420094,1.71072446022705,1.02827492703324,2.70308752059526,2.00078502841405,0.336393253036082,0,0.1466765716419,0.775630294546667,0,0,0.531876233169741,1.04007436911366,0,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,0,0,1.80863626235752,0,0.699810938274399,1.2162378064119,0,0,0.479249710983165,0,0,0.723906533337896,0.410952645100767,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.157702415033935,0.468565659970853,0,0,1.03473071292505,0,0,0.0868836144680828,0.391602314925481,0.686286847621712,0,0,0,0,0,0,0.992431231275107,1.38115775959256,0.561320188866147,0.384417447767103,0,1.12597744800525,0,0.462629081407967,0.710246901252508,0.328508624055237,2.59627214591811,0.348631135379878,1.20859449591622,1.40354529212299,0.0920809889358963,0,0.182091168006717,0,0,0.308061348417659,0.784349769176855,1.46139224653261,0.633309773357254,1.13733384070897,1.02056223165909,0,0,1.08378575017541,0,0.509752546090077,0.831076008928724,0,0,0,0,0.656029291399411,0.650756789328606,0.618246069886334,0.640986253728404,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.384380134730212,0.255225424989168,0,0,0.94443704049192,0,1.23213432070436,2.66153015158511,0,0,0.572499546967965,0,0.316379424718726,1.14378116354295,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0,3.43710218674637,1.58510321173008,1.68503382495592,0,0.243713489631284,3.16950440270266,0,0.141405431953713,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0.608731130888112,0.30982349809975,0,0.143411352204052,0,0.7133421029625,0,0,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,1.39203086947621,0,0,8.99294313594114,0,0,1.17206543417515,0,1.11443384277478,0.852408440419239,0,0,0,0,0.140669416410513,1.78093928036649,0.16480387422676,1.05562704063997,0.398495976502139,0.552567831062295,0,0.715880777515084,0,0.933118762985422,0.898683511473268,1.61119057208048,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,1.01701460117107,0,0,0,0,1.77148277162768,0,0,0.221158519862449,0,0,0.10893846351899,0,0,1.13942055847001,1.1528195219403,1.16684937732704,2.93347904189422,0,0.183195186803725,0,0,0,0.166211681900156,0.225595660617181,0.784250137270958,0.671286347903371,0,1.27149263184303,1.68798451622422,2.28525931422807,1.13082457147153,0,0,0,0,2.37216902944498,1.48276726735803,1.14864144456001,0.20220339894203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| ||
|short_description=p@chr11:118491505..118491550,+ | |short_description=p@chr11:118491505..118491550,+ | ||
}} | }} |
Latest revision as of 18:49, 23 July 2015
Short description: | p@chr11:118491505..118491550, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118491505..118491550, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 8.81e-17 | 58 |
barrier cell | 8.81e-17 | 58 |
mesothelial cell | 1.70e-15 | 19 |
epithelial cell | 5.53e-13 | 253 |
squamous epithelial cell | 7.25e-12 | 63 |
embryonic cell | 9.67e-10 | 250 |
endothelial cell of artery | 8.72e-09 | 9 |
mesodermal cell | 1.51e-08 | 121 |
endothelial cell of vascular tree | 3.29e-08 | 24 |
germ line cell | 1.49e-07 | 7 |
germ cell | 1.49e-07 | 7 |
blood vessel endothelial cell | 1.81e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.81e-07 | 18 |
endothelial cell | 9.38e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 8.72e-09 | 9 |
arterial system endothelium | 8.72e-09 | 9 |
endothelium of artery | 8.72e-09 | 9 |
blood vessel endothelium | 1.81e-07 | 18 |
endothelium | 1.81e-07 | 18 |
cardiovascular system endothelium | 1.81e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.21e-14 | 239 |
cancer | 7.69e-14 | 235 |
cell type cancer | 1.95e-10 | 143 |
carcinoma | 8.43e-07 | 106 |