FFCP PHASE1:Mm9::chr7:29164371..29164409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:29164371..29164409,+ | |||
|description=CAGE_peak_at_chr7:29164371..29164409,+ | |description=CAGE_peak_at_chr7:29164371..29164409,+ | ||
|id=chr7:29164371..29164409,+ | |id=chr7:29164371..29164409,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.67e-09!32;CL:0002032!2.67e-09!32;CL:0000037!2.67e-09!32;CL:0000566!2.67e-09!32;CL:0000837!2.67e-09!32;CL:0000838!6.76e-08!12;CL:0000542!9.57e-08!13;CL:0000051!9.57e-08!13;CL:0002031!2.17e-07!25;CL:0000084!3.32e-07!11;CL:0000827!3.32e-07!11;CL:0000738!5.82e-07!17;CL:0002087!5.82e-07!17 | |ontology_enrichment_celltype=CL:0000988!2.67e-09!32;CL:0002032!2.67e-09!32;CL:0000037!2.67e-09!32;CL:0000566!2.67e-09!32;CL:0000837!2.67e-09!32;CL:0000838!6.76e-08!12;CL:0000542!9.57e-08!13;CL:0000051!9.57e-08!13;CL:0002031!2.17e-07!25;CL:0000084!3.32e-07!11;CL:0000827!3.32e-07!11;CL:0000738!5.82e-07!17;CL:0002087!5.82e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.51e-13,12;CL:0000791,2.80e-12,9;CL:0000789,2.80e-12,9;CL:0002420,2.80e-12,9;CL:0002419,2.80e-12,9;CL:0000790,2.80e-12,9;CL:0000542,7.98e-12,13;CL:0000051,7.98e-12,13;CL:0000084,1.18e-11,11;CL:0000827,1.18e-11,11;CL:0000988,3.04e-11,32;CL:0002032,3.04e-11,32;CL:0000037,3.04e-11,32;CL:0000837,3.04e-11,32;CL:0000624,6.77e-11,8;CL:0002031,6.95e-11,25;CL:0000738,3.88e-10,17;CL:0002087,3.88e-10,17;CL:0000893,4.58e-08,6;CL:0002489,4.58e-08,6;CL:0000898,4.58e-08,6;CL:0000809,4.58e-08,6;CL:0000810,4.58e-08,6;CL:0000895,4.58e-08,6;CL:0000808,4.58e-08,6;CL:0000894,4.58e-08,6;CL:0000806,4.58e-08,6;CL:0000807,4.58e-08,6;CL:0000805,4.58e-08,6;CL:0002425,4.58e-08,6;CL:0002436,4.58e-08,6;CL:0002427,4.58e-08,6;CL:0002428,4.58e-08,6;CL:0002429,4.58e-08,6;CL:0002433,4.58e-08,6;CL:0002431,4.58e-08,6;CL:0002432,4.58e-08,6;CL:0002320,5.30e-08,46;CL:0000134,5.30e-08,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-08!45;UBERON:0003061!1.26e-08!45;UBERON:0002193!1.55e-08!48;UBERON:0003408!9.12e-08!24;UBERON:0004177!1.34e-07!29;UBERON:0002370!2.14e-07!23;UBERON:0000974!2.14e-07!23;UBERON:0004807!2.14e-07!23;UBERON:0005058!2.14e-07!23;UBERON:0003351!2.14e-07!23;UBERON:0009113!2.14e-07!23;UBERON:0003295!2.14e-07!23;UBERON:0009722!2.14e-07!23;UBERON:0005562!2.14e-07!23;UBERON:0007690!2.14e-07!23;UBERON:0006562!7.41e-07!24;UBERON:0001557!7.41e-07!24;UBERON:0001042!7.41e-07!24;UBERON:0008814!7.41e-07!24;UBERON:0009145!7.41e-07!24 | |ontology_enrichment_uberon=UBERON:0002390!1.26e-08!45;UBERON:0003061!1.26e-08!45;UBERON:0002193!1.55e-08!48;UBERON:0003408!9.12e-08!24;UBERON:0004177!1.34e-07!29;UBERON:0002370!2.14e-07!23;UBERON:0000974!2.14e-07!23;UBERON:0004807!2.14e-07!23;UBERON:0005058!2.14e-07!23;UBERON:0003351!2.14e-07!23;UBERON:0009113!2.14e-07!23;UBERON:0003295!2.14e-07!23;UBERON:0009722!2.14e-07!23;UBERON:0005562!2.14e-07!23;UBERON:0007690!2.14e-07!23;UBERON:0006562!7.41e-07!24;UBERON:0001557!7.41e-07!24;UBERON:0001042!7.41e-07!24;UBERON:0008814!7.41e-07!24;UBERON:0009145!7.41e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,5.08e-14,24;UBERON:0002370,2.99e-13,23;UBERON:0000974,2.99e-13,23;UBERON:0004807,2.99e-13,23;UBERON:0005058,2.99e-13,23;UBERON:0003351,2.99e-13,23;UBERON:0009113,2.99e-13,23;UBERON:0003295,2.99e-13,23;UBERON:0009722,2.99e-13,23;UBERON:0005562,2.99e-13,23;UBERON:0007690,2.99e-13,23;UBERON:0006562,1.72e-12,24;UBERON:0001557,1.72e-12,24;UBERON:0001042,1.72e-12,24;UBERON:0008814,1.72e-12,24;UBERON:0009145,1.72e-12,24;UBERON:0004177,1.20e-10,29;UBERON:0005057,1.20e-10,29;UBERON:0000072,1.46e-10,27;UBERON:0002193,4.50e-10,48;UBERON:0002405,4.50e-10,48;UBERON:0002390,6.57e-10,45;UBERON:0003061,6.57e-10,45;UBERON:0000077,4.15e-09,35;UBERON:0001004,1.59e-08,42;UBERON:0002384,5.30e-08,46;UBERON:0000065,6.02e-08,41;UBERON:0003929,6.25e-08,55;UBERON:0007811,1.14e-07,36;UBERON:0000153,2.87e-07,43;UBERON:0000490,3.18e-07,66;UBERON:0005911,5.22e-07,69 | |||
|phase1_expression=0.320297694209588,1.04692622291808,0.454999239389536,3.62957053568196,3.00537437967808,1.51091344720701,0.700837921786577,6.06879620175408,4.36445038670167,2.80877431586392,1.36974374580404,1.27635454392538,2.22560948910567,3.75907730401689,0.333109761815663,0.607425802169478,0.699561878128147,2.99689057090326,2.4680598049033,1.27316895539409,0.595303031057488,0.893618560807968,1.30599894569468,0.639969691173627,0,1.14846392823004,0.86152399231815,0.430942465371778,0.190023419456374,0.504060259519861,1.10865255327652,1.27006134691926,0.61506478758457,0,0.577703239502549,0,0.612508068787107,4.60384793810598,0.7813353445238,3.14114246384279,25.8821854733646,4.09827290975067,2.91306211818692,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0.699932108126813,0,7.71799987865587,5.07753499407941,4.36921938885203,0,0.286533439938757,0,0.404632921719196,0,0,0.338844532069132,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.384218305321555,0.207379224616955,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.510749352340751,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0.302286240427142,2.02905142091174,0,0,1.61910957491345,0.649776417447669,0,0.561777680527007,0.170430322578058,0.519572009205738,0,0.704217098883403,1.28326477414318,2.54805239706646,0,0,0.253359865475099,0,0.34255163915718,4.14300613835475,0.445326417194474,0.346970653532272,0.913396434936424,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0.247194967734374,1.3013942122792,0,0.647067399789637,0.220841518460394,1.45462575940567,0,0,0,1.02182822083437,0.718890747035522,2.39961092397363,2.1601938602421,0.149790639404823,0.457500602818626,0.502617408451458,0.173824320192276,0,0.20778804455956,0,0.611036183101898,0.746441823660558,0.505445516867349,0.631325567659422,0.390361328888111,0.459804208866946,0.540186389416048,0.30140963567143,0.612328492361951,0.640568601424249,0.281105173679186,0.776110112217047,0,0.378212160335639,1.23165786914764,0,0.278047249225598,1.39300866608867,0.823128545631774,1.19420560091096,0.702213187313235,1.54408744268829,0.852490498186778,0,0.234526059981096,0.900310307305074,0,0.393528463494808,0.617068451549513,1.39520366850245,0.536546802799238,0.700592054203017,0.493679549740441,0.164167464079095,0.56748166682099,0.877199924551994,0.658650345873152,0.671032093801859,0.210289948564127,0.411618449517138,0,0,0.639864751605702,2.55460339046482,0.902072229254653,0.403367049246685,0.889512175379481,0.190225626112559,0.474529061544512,0.658795818896044,0.502670417600539,0.795825888164603,0.19496408711912,0,0.648414149624083,0.398282546508734,0.758671603812327,0.342745537829186,1.1270773567308,0.610953983535943,0.775809948670503,0.0701358198903186,0.126473074248515,0.442830443938806,0.470996183524124,0.493588655687202,0,0.166845105716094,0.196558995113203,0,0.811440485554012,0,0.50925170356284,0.287696137450811,0.324270453550071,0,2.87536413054709,0.372140947668503,0.312037673114561,0.757736633841335,0,0,1.29327233116623,0,0.325929952884052,0.509235257325564,0.938760993154008,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,0.478364305972461,1.80249646187312,1.20879487306127,0.723245292907558,3.01582567878545,0.54390568381871,0,0.275936746304732,0.481651769963376,0.35163505977661,0,0.757412781613119,0.315508219416257,0.390438744296638,1.07711698866399,0.477937595905104,0.222798674082394,0.566153061577665,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,0.425820255624806,0.35613120733451,0.488660878060728,0.329940245945071,1.32745138339963,0.485561272309963,0,0.377210159511796,0.885905678642318,0.307435147943927,0,0,1.42598951353889,0.948110273807448,0,3.09406629744561,3.40439605753788,0.36012218806262,0.646793418913773,0.428674070063185,1.06404140185364,0.535106452806212,0.987294123612726,0.608929898229199,0.704015124191131,0.42366414172764,0.220528398054962,1.48397627647332,0.161464426695906,0.422190474497091,0.238744688006273,0.164140899745061,0.874442509889552,0.556275906031529,0.683483523191411,0.206386867963223,1.11116716421827,0.753473828018764,0.546776910884101,0.915112692826091,2.20971958992012,2.37917468950219,1.65839968565309,0,1.10717597753397,0.609958401380546,0.432021363287205,0.836353184057875,0.436725127492355,0.674321731924103,0.330613822901344,0.26175594198403,0.388844919875379,1.24267862617385,0,0.747582730219894,0.66183396182839,0.777804753376191,0.904118764344118,0.168956125490778,0.117357238645754,0.651021924219751,0.524296722128554,0.241584120826006,0.288030006257865,2.8441000856536,0,0.821687657318618,0.129920822977795,0.716106782669926,1.19208812868759,1.80293174279953,0.738447635872886,2.3222283488074,2.13379058634,1.41156659191577,2.63136277997332,2.88635524920988,5.14258369598903,0.226730383615211,0.221985953374065,0.269141569828427,1.17519231454855,0.772758376128762,0.563047426353546,0.183151624267265,0.643105137237198,0,0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| ||
|short_description=p@chr7:29164371..29164409,+ | |short_description=p@chr7:29164371..29164409,+ | ||
}} | }} |
Latest revision as of 23:00, 4 August 2015
Short description: | p@chr7:29164371..29164409, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29164371..29164409, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of gut | 5.08e-14 | 24 |
thymus | 2.99e-13 | 23 |
neck | 2.99e-13 | 23 |
respiratory system epithelium | 2.99e-13 | 23 |
hemolymphoid system gland | 2.99e-13 | 23 |
pharyngeal epithelium | 2.99e-13 | 23 |
thymic region | 2.99e-13 | 23 |
pharyngeal gland | 2.99e-13 | 23 |
entire pharyngeal arch endoderm | 2.99e-13 | 23 |
thymus primordium | 2.99e-13 | 23 |
early pharyngeal endoderm | 2.99e-13 | 23 |
pharynx | 1.72e-12 | 24 |
upper respiratory tract | 1.72e-12 | 24 |
chordate pharynx | 1.72e-12 | 24 |
pharyngeal arch system | 1.72e-12 | 24 |
pharyngeal region of foregut | 1.72e-12 | 24 |
hemopoietic organ | 1.20e-10 | 29 |
immune organ | 1.20e-10 | 29 |
segment of respiratory tract | 1.46e-10 | 27 |
hemolymphoid system | 4.50e-10 | 48 |
immune system | 4.50e-10 | 48 |
hematopoietic system | 6.57e-10 | 45 |
blood island | 6.57e-10 | 45 |
mixed endoderm/mesoderm-derived structure | 4.15e-09 | 35 |
respiratory system | 1.59e-08 | 42 |
connective tissue | 5.30e-08 | 46 |
respiratory tract | 6.02e-08 | 41 |
gut epithelium | 6.25e-08 | 55 |
craniocervical region | 1.14e-07 | 36 |
anterior region of body | 2.87e-07 | 43 |
unilaminar epithelium | 3.18e-07 | 66 |
endo-epithelium | 5.22e-07 | 69 |