FFCP PHASE1:Hg19::chr10:128076844..128076856,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:128076844..128076856,-
|short_description=p5@ADAM12
|description=CAGE_peak_5_at_ADAM12_5end
|association_with_transcript=167bp_to_ENST00000368676,ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8038 | |EntrezGene=8038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=190 | |HGNC=190 | ||
|UniProt=O43184, | |TSSclassifier=strong | ||
|UniProt=O43184,Q5JRP2 | |||
|association_with_transcript=167bp_to_ENST00000368676,ENST00000368679,ENST00000448723_5end | |||
|cluster_id=chr10:128076844..128076856,- | |||
|description=CAGE_peak_5_at_ADAM12_5end | |||
|id=chr10:128076844..128076856,- | |||
|ontology_enrichment_celltype=CL:0000055!9.73e-29!180;CL:0000057!4.38e-15!75;CL:0000048!4.30e-12!430;CL:0000680!1.96e-11!57;CL:0000056!1.96e-11!57;CL:0000355!1.96e-11!57;CL:0000723!3.80e-11!436;CL:0000187!2.82e-10!54;CL:0000034!3.46e-10!444;CL:0000183!4.19e-10!59;CL:0002620!5.28e-10!23;CL:0000393!6.87e-09!60;CL:0000211!6.87e-09!60;CL:0000192!2.97e-08!42;CL:0000514!2.97e-08!42;CL:0000359!3.89e-08!32;CL:0000499!4.22e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000134;4.20e-12;55!CL:0000048;5.06e-11;58!CL:0000327;3.30e-09;15!CL:0000723;6.84e-09;61!CL:0000499;1.48e-08;28!CL:0000034;2.75e-08;69!CL:0002320;3.14e-07;188!CL:0002620;3.44e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.70e-19,427;CL:0000723,2.26e-18,433;CL:0000034,2.32e-17,441;CL:0002320,1.06e-13,361;CL:0000057,2.68e-11,76;CL:0000134,2.81e-11,354;CL:0000219,1.48e-10,386;CL:0000327,5.31e-09,15;CL:0000680,7.30e-09,58;CL:0000056,7.30e-09,58;CL:0000355,7.30e-09,58;CL:0000499,1.65e-08,28;CL:0000187,1.84e-07,55;CL:0002620,2.29e-07,23;CL:0000136,2.72e-07,15;CL:0000192,7.54e-07,43;CL:0000514,7.54e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.24e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.68e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.20e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!1.81e-12!70;UBERON:0000914!5.29e-12!83;UBERON:0002329!5.29e-12!83;UBERON:0003077!5.29e-12!83;UBERON:0003059!5.29e-12!83;UBERON:0007282!5.29e-12!83;UBERON:0009618!5.29e-12!83;UBERON:0007285!5.29e-12!83;UBERON:0001134!5.33e-11!61;UBERON:0002036!5.33e-11!61;UBERON:0003082!5.33e-11!61;UBERON:0002385!1.39e-10!63;UBERON:0001015!1.39e-10!63;UBERON:0000383!1.39e-10!63;UBERON:0000486!5.30e-10!82;UBERON:0002384!6.54e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.00e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.29e-14,371;UBERON:0001134,1.36e-08,62;UBERON:0002036,1.36e-08,62;UBERON:0003082,1.36e-08,62;UBERON:0002385,4.44e-08,64;UBERON:0001015,4.44e-08,64;UBERON:0000383,4.44e-08,64;UBERON:0002329,1.06e-07,71;UBERON:0003059,1.06e-07,71;UBERON:0007282,1.06e-07,71;UBERON:0004290,1.06e-07,71;UBERON:0009618,1.06e-07,71;UBERON:0003077,1.75e-07,72;UBERON:0007285,1.75e-07,72;UBERON:0007524,2.84e-07,73 | |||
|phase1_expression=1.2717486548939,3.63970890614671,2.53717927372748,0,4.91657203870017,1.74467704820074,0,1.89515962028049,1.56711376919903,0,0,0,0,1.60896258848061,5.30235801164665,0.672325146451775,0,2.19093027116212,1.95173119516203,1.84681587115182,1.83600622119828,2.19418305034661,2.0036519099174,1.23186982565596,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,2.89151321907653,1.00267582127178,2.17269778441236,5.5670016293577,11.1926020169606,0.567208902984407,0.886917589850256,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,6.46063537203914,1.2663051166458,5.69359477496841,11.4734648299525,2.83734705758686,0.560677600142307,1.06748995729705,1.72667283892012,0.311211035399766,0.269421344139376,0.163461903113459,8.32465852047123,1.72852777344,0,0.936480230490962,0.570471821544449,0.448346041655403,0.117434498643765,0.809364721840658,0.561803226808994,0.204154171254893,0,0.206651562351531,1.18800285728205,0,0.910161361938026,1.43723628363248,0,0,0,0.877955241761676,0.612975591598039,0.751190294532984,0.113432183160021,2.51145489964407,1.49490172172997,5.51022943014861,3.30100205692843,2.78241828943785,2.57640540045629,2.04728541964749,4.55696097051419,4.28722822709274,2.77677151668526,1.93304787148829,2.10139873864455,1.77504796258307,0.906768884048762,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,1.38134921352481,0,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,2.057870056657,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0,1.40890433082986,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,3.94130590316755,3.16974362447614,0.829312462163088,0.432359860250884,1.00993946741104,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0,1.56983518083505,1.30788020649984,1.0267360014933,9.30756353456,0,3.381211010224,5.31876233169741,2.08014873822732,0.771622122786426,0,0.532844358032199,0.142977993658148,0,0.823240336780769,0.977208552881205,0,0,1.20575750823834,1.74306691720059,0.099972991182057,0,0,0,3.35474797688216,3.44585807502342,1.42636905040718,1.88215698667853,1.43833425785268,1.61154866915906,0,0.591092280605782,0,0,1.52456774533478,0,0,0.502548796003046,0,0,0,0,1.8403723757871,0,1.62759014219841,2.9115920614313,3.92543775353756,1.10391690523754,3.27995961979597,1.20378439891088,2.27407504055985,0,2.65690239414175,3.31864503375066,0.695068915744663,5.48243240895674,7.89229874764969,0,0,0,0,0,0,0.992431231275107,1.2276957863045,2.24528075546459,3.71603532841533,2.55853624533352,4.3430558708774,0,1.85051632563187,3.19611105563629,1.97105174433142,0.519254429183621,2.09178681227927,0,0,0,3.3296189967736,2.54927635209404,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0.0915694648183434,0,0,0,1.6068392984416,2.03008508413456,1.84858340537573,0.614014698904518,0.275673144969061,0.859361958946189,1.16013355131383,0.511359764496605,6.41030656656509,0,0,0,0.10115778085555,1.85938219718914,14.1665556073788,0.6970372701606,0,1.06461206063404,0.869932992075073,0.74129687641568,2.00374841438788,2.60510858551767,2.53103539774981,0.762520775695299,0,0.42793898803392,1.59101623962968,1.56989728039846,1.07923474549989,1.64722217841633,2.12062324222236,1.41527737101321,0,2.10629228119491,0,2.19342140668156,0,1.36499911407986,1.55545975149084,0,2.75682671773062,0.66343897524122,0.438450885253763,0.578775534266688,0,3.44947640836597,0.92947049429925,2.25356482025793,0,0.196498082026242,3.21003946333125,0,2.53329162357197,3.95153871551882,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.779160935160341,0,0,0,0,0,0.409074730008619,0,1.86623752597084,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.482385754501632,0,0.110579259931225,0.886642856860642,0.219385397153973,0,0,0.307801034015188,0.91153644677601,0,0,0,3.19001159731919,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0.61214552326098,1.70603764996917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967563312890852,0.292357268344742,0.328461828212837,0,0,0.225980740780532,0,0.397429223405979,0.316553979779393,0,0.480952921509202,0,0,0,0,0,0,0,0.471388069233591,0.135904206073614,0.418411385249333,0.101998217636322,0,0,0.136905378891993,0,1.71906176567983,0,0,0,0.717873024576814,0.199679000498991,0,0,0,3.96329871896644,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,1.349843349309,0,0.121499113316049,0,0.0788057072991982,0.681909645754975,0,0,0,0,0,0,2.17199840701485,0,1.63293680054705,3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| ||
|short_description=p5@ADAM12 | |||
}} | }} |
Latest revision as of 00:22, 17 September 2015
Short description: | p5@ADAM12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ADAM12_5end |
Coexpression cluster: | NA |
Association with transcript: | 167bp_to_ENST00000368676, ENST00000368679, ENST00000448723_5end |
EntrezGene: | ADAM12 |
HGNC: | 190 |
UniProt: | O43184Q5JRP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.70e-19 | 427 |
somatic stem cell | 2.26e-18 | 433 |
stem cell | 2.32e-17 | 441 |
connective tissue cell | 1.06e-13 | 361 |
fibroblast | 2.68e-11 | 76 |
mesenchymal cell | 2.81e-11 | 354 |
motile cell | 1.48e-10 | 386 |
extracellular matrix secreting cell | 5.31e-09 | 15 |
muscle precursor cell | 7.30e-09 | 58 |
myoblast | 7.30e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.30e-09 | 58 |
stromal cell | 1.65e-08 | 28 |
muscle cell | 1.84e-07 | 55 |
skin fibroblast | 2.29e-07 | 23 |
fat cell | 2.72e-07 | 15 |
smooth muscle cell | 7.54e-07 | 43 |
smooth muscle myoblast | 7.54e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.29e-14 | 371 |
skeletal muscle tissue | 1.36e-08 | 62 |
striated muscle tissue | 1.36e-08 | 62 |
myotome | 1.36e-08 | 62 |
muscle tissue | 4.44e-08 | 64 |
musculature | 4.44e-08 | 64 |
musculature of body | 4.44e-08 | 64 |
somite | 1.06e-07 | 71 |
presomitic mesoderm | 1.06e-07 | 71 |
presumptive segmental plate | 1.06e-07 | 71 |
dermomyotome | 1.06e-07 | 71 |
trunk paraxial mesoderm | 1.06e-07 | 71 |
paraxial mesoderm | 1.75e-07 | 72 |
presumptive paraxial mesoderm | 1.75e-07 | 72 |
dense mesenchyme tissue | 2.84e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.20e-13 | 14 |