FFCP PHASE1:Hg19::chr10:49459824..49459841,-: Difference between revisions
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|id=chr10:49459824..49459841,-
|short_description=p8@FRMPD2
|description=CAGE_peak_8_at_FRMPD2_5end
|association_with_transcript=-24bp_to_ENST00000305531,uc001jgh.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=143162 | |EntrezGene=143162 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28572 | |HGNC=28572 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000305531,uc001jgh.2_5end | |||
|cluster_id=chr10:49459824..49459841,- | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_8_at_FRMPD2_5end | |||
|id=chr10:49459824..49459841,- | |||
|ontology_enrichment_celltype=CL:0002322!1.49e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002535;7.14e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.56e-26,2 | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.45e-18;3!UBERON:0003353;9.45e-18;3!UBERON:0004872;1.89e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.13e-13;4!DOID:4362;3.26e-11;5!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7!DOID:3905;8.37e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.29e-13,4;DOID:4362,2.94e-11,5;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7;DOID:3905,8.85e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000489!6.33e-08!32;UBERON:0002113!1.69e-07!27;UBERON:0003918!1.69e-07!27;UBERON:0005095!1.69e-07!27;UBERON:0007687!1.69e-07!27;UBERON:0006554!6.29e-07!44;UBERON:0001008!9.70e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;7.14e-26;2!UBERON:0004801;7.14e-26;2!UBERON:0002106;6.76e-18;3!UBERON:0004177;2.66e-11;5!UBERON:0005057;2.66e-11;5!UBERON:0000002;1.44e-09;6!UBERON:0001560;1.44e-09;6!UBERON:0000077;2.06e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.56e-26,2;UBERON:0004801,5.56e-26,2;UBERON:0002106,6.76e-18,3;UBERON:0004854,6.76e-18,3;UBERON:0009034,6.76e-18,3;UBERON:0002095,6.76e-18,3;UBERON:0004782,6.76e-18,3;UBERON:0003281,6.76e-18,3;UBERON:0009664,6.76e-18,3;UBERON:0002296,6.76e-18,3;UBERON:0005602,6.76e-18,3;UBERON:0001179,6.76e-18,3;UBERON:0006293,6.76e-18,3;UBERON:0000002,1.32e-09,6;UBERON:0001560,1.32e-09,6;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7;UBERON:0000077,6.67e-08,29;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8 | |||
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| ||
|short_description=p8@FRMPD2 | |||
}} | }} |
Latest revision as of 08:48, 18 September 2015
Short description: | p8@FRMPD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FRMPD2_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | -24bp_to_ENST00000305531, uc001jgh.2_5end |
EntrezGene: | FRMPD2 |
HGNC: | 28572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.56e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.56e-26 | 2 |
cervix epithelium | 5.56e-26 | 2 |
spleen | 6.76e-18 | 3 |
gastrointestinal system mesentery | 6.76e-18 | 3 |
stomach region | 6.76e-18 | 3 |
mesentery | 6.76e-18 | 3 |
gastrointestinal system serosa | 6.76e-18 | 3 |
mesentery of stomach | 6.76e-18 | 3 |
gut mesentery | 6.76e-18 | 3 |
dorsal mesentery | 6.76e-18 | 3 |
dorsal mesogastrium | 6.76e-18 | 3 |
peritoneal cavity | 6.76e-18 | 3 |
spleen primordium | 6.76e-18 | 3 |
uterine cervix | 1.32e-09 | 6 |
neck of organ | 1.32e-09 | 6 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |
mixed endoderm/mesoderm-derived structure | 6.67e-08 | 29 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.29e-13 | 4 |
cervical cancer | 2.94e-11 | 5 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |
lung carcinoma | 8.85e-07 | 9 |