FFCP PHASE1:Hg19::chr10:5060148..5060171,-: Difference between revisions
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|id=chr10:5060148..5060171,-
|short_description=p2@AKR1C2
|description=CAGE_peak_2_at_AKR1C2_5end
|association_with_transcript=35bp_to_ENST00000407674,uc001ihs.2,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
| | |EntrezGene=100653286,1646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
| | |||
|HGNC=385 | |HGNC=385 | ||
|TSSclassifier=strong | |||
|UniProt=P52895 | |UniProt=P52895 | ||
|association_with_transcript=35bp_to_ENST00000407674,uc001ihs.2,uc001iht.2_5end | |||
|cluster_id=chr10:5060148..5060171,- | |||
|coexpression_cluster_id=C1585 | |||
|description=CAGE_peak_2_at_AKR1C2_5end | |||
|id=chr10:5060148..5060171,- | |||
|ontology_enrichment_celltype=CL:0002549!8.49e-08!2;CL:0000136!1.24e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.44e-12;19!CL:0002553;2.79e-11;1!CL:0000319;4.81e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,1.36e-12,19;CL:0002553,2.79e-11,1;CL:0000319,5.05e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.46e-19;30!UBERON:0008947;1.70e-11;29!UBERON:0009497;2.95e-07;13 | |||
|ontology_enrichment_disease=DOID:0050615!5.80e-08!16;DOID:305!1.30e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:0050615;2.92e-21;16!DOID:1324;6.07e-16;15!DOID:0050619;4.15e-11;1!DOID:1357;4.15e-11;1!DOID:3030;4.81e-11;1!DOID:5662;1.33e-10;1!DOID:2355;1.33e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,2.67e-21,16;DOID:1324,5.61e-16,15;DOID:305,3.38e-13,106;DOID:0050619,4.15e-11,1;DOID:1357,4.15e-11,1;DOID:3030,5.05e-11,1;DOID:5662,9.97e-11,1;DOID:2355,1.77e-10,1;DOID:0050687,3.09e-09,143;DOID:162,5.30e-09,235;DOID:14566,9.31e-09,239;DOID:7,2.11e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0005284!4.82e-11!5;UBERON:0005178!1.28e-08!34;UBERON:0002224!1.28e-08!34;UBERON:0005181!2.57e-08!35;UBERON:0003947!8.49e-08!2;UBERON:0005629!8.49e-08!2;UBERON:0005358!8.49e-08!2;UBERON:0001886!8.49e-08!2;UBERON:0004086!8.49e-08!2;UBERON:0005282!8.49e-08!2;UBERON:0005281!8.49e-08!2;UBERON:0008947!1.82e-07!38;UBERON:0003258!1.82e-07!38;UBERON:0002048!3.65e-07!22;UBERON:0000117!3.65e-07!22;UBERON:0000171!3.65e-07!22;UBERON:0000170!3.65e-07!22;UBERON:0005597!3.65e-07!22;UBERON:0000118!3.65e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;1.44e-12;19!UBERON:0000115;1.44e-12;19!UBERON:0001764;4.15e-11;1!UBERON:0001825;4.15e-11;1!UBERON:0002048;7.77e-11;22!UBERON:0004807;7.77e-11;22!UBERON:0000117;7.77e-11;22!UBERON:0000171;7.77e-11;22!UBERON:0000170;7.77e-11;22!UBERON:0005178;2.83e-08;34!UBERON:0002224;2.83e-08;34!UBERON:0005181;3.78e-08;35!UBERON:0000072;1.16e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,1.36e-12,19;UBERON:0000115,1.36e-12,19;UBERON:0001764,4.15e-11,1;UBERON:0001825,4.15e-11,1;UBERON:0002048,7.37e-11,22;UBERON:0000117,7.37e-11,22;UBERON:0000171,7.37e-11,22;UBERON:0000170,7.37e-11,22;UBERON:0005597,7.37e-11,22;UBERON:0000118,7.37e-11,22;UBERON:0005178,9.28e-10,34;UBERON:0002224,9.28e-10,34;UBERON:0005181,1.82e-09,35;UBERON:0008947,1.10e-08,38;UBERON:0003258,1.10e-08,38;UBERON:0009569,1.16e-08,112;UBERON:0004807,1.69e-08,28;UBERON:0005911,2.73e-08,82;UBERON:0005177,4.77e-08,101;UBERON:0001041,9.91e-08,87;UBERON:0001004,2.69e-07,74;UBERON:0000072,6.23e-07,47 | |||
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| ||
|short_description=p2@AKR1C2 | |||
}} | }} |
Latest revision as of 09:55, 18 September 2015
Short description: | p2@AKR1C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AKR1C2_5end |
Coexpression cluster: | C1585_nonsmall_hepatoma_mucinous_bile_lung_Adipocyte_mature |
Association with transcript: | 35bp_to_ENST00000407674, uc001ihs.2, uc001iht.2_5end |
EntrezGene: | 100653286,1646 |
HGNC: | 385 |
UniProt: | P52895 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 1.36e-12 | 19 |
lung fibroblast | 2.79e-11 | 1 |
mucus secreting cell | 5.05e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 1.36e-12 | 19 |
lung epithelium | 1.36e-12 | 19 |
maxillary sinus | 4.15e-11 | 1 |
paranasal sinus | 4.15e-11 | 1 |
lung | 7.37e-11 | 22 |
respiratory tube | 7.37e-11 | 22 |
respiration organ | 7.37e-11 | 22 |
pair of lungs | 7.37e-11 | 22 |
lung primordium | 7.37e-11 | 22 |
lung bud | 7.37e-11 | 22 |
thoracic cavity element | 9.28e-10 | 34 |
thoracic cavity | 9.28e-10 | 34 |
thoracic segment organ | 1.82e-09 | 35 |
respiratory primordium | 1.10e-08 | 38 |
endoderm of foregut | 1.10e-08 | 38 |
subdivision of trunk | 1.16e-08 | 112 |
respiratory system epithelium | 1.69e-08 | 28 |
endo-epithelium | 2.73e-08 | 82 |
trunk region element | 4.77e-08 | 101 |
foregut | 9.91e-08 | 87 |
respiratory system | 2.69e-07 | 74 |
segment of respiratory tract | 6.23e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 2.67e-21 | 16 |
lung cancer | 5.61e-16 | 15 |
carcinoma | 3.38e-13 | 106 |
paranasal sinus cancer | 4.15e-11 | 1 |
maxillary sinus cancer | 4.15e-11 | 1 |
mucinous adenocarcinoma | 5.05e-11 | 1 |
pleomorphic carcinoma | 9.97e-11 | 1 |
anemia | 1.77e-10 | 1 |
cell type cancer | 3.09e-09 | 143 |
cancer | 5.30e-09 | 235 |
disease of cellular proliferation | 9.31e-09 | 239 |
disease of anatomical entity | 2.11e-08 | 39 |