FFCP PHASE1:Hg19::chr10:64973705..64973769,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:64973705..64973769,-
|short_description=p8@JMJD1C
|description=CAGE_peak_8_at_JMJD1C_5end
|association_with_transcript=-438bp_to_AK095584_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221037 | |EntrezGene=221037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12313 | |HGNC=12313 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-438bp_to_AK095584_5end | |||
|cluster_id=chr10:64973705..64973769,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_8_at_JMJD1C_5end | |||
|id=chr10:64973705..64973769,- | |||
|ontology_enrichment_celltype=CL:0000766!9.68e-15!76;CL:0002057!3.23e-14!42;CL:0002009!9.46e-14!65;CL:0000860!1.65e-13!45;CL:0000738!3.01e-13!140;CL:0002194!3.43e-13!63;CL:0000576!3.43e-13!63;CL:0000040!3.43e-13!63;CL:0000559!3.43e-13!63;CL:0000557!2.54e-12!71;CL:0002087!2.63e-12!119;CL:0000839!3.40e-11!70;CL:0002031!2.40e-10!124;CL:0002032!3.71e-09!165;CL:0000837!3.71e-09!165;CL:0000037!4.70e-09!172;CL:0000566!4.70e-09!172;CL:0000763!6.17e-09!112;CL:0000049!6.17e-09!112;CL:0000988!1.46e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.74e-19;33!CL:0002057;3.74e-19;33!CL:0000473;6.56e-15;39!CL:0000234;6.56e-15;39!CL:0000576;1.07e-12;48!CL:0000766;1.13e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.01e-20,42;CL:0002057,6.01e-20,42;CL:0000473,6.36e-19,48;CL:0000234,6.36e-19,48;CL:0000766,5.79e-16,72;CL:0002009,3.13e-15,61;CL:0000738,3.98e-15,136;CL:0002194,6.41e-15,59;CL:0000576,6.41e-15,59;CL:0000040,6.41e-15,59;CL:0000559,6.41e-15,59;CL:0002087,7.56e-15,115;CL:0000557,6.74e-13,67;CL:0000839,3.14e-12,66;CL:0002031,4.65e-12,120;CL:0000037,5.14e-10,168;CL:0002032,2.34e-09,161;CL:0000837,2.34e-09,161;CL:0000988,2.64e-09,177;CL:0000763,1.76e-08,108;CL:0000049,1.76e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.47e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.48e-09!80;UBERON:0002390!6.12e-09!102;UBERON:0003061!6.12e-09!102;UBERON:0001474!7.72e-09!86;UBERON:0004765!1.88e-07!101;UBERON:0001434!1.88e-07!101;UBERON:0002193!2.37e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.66e-11,98;UBERON:0003061,6.66e-11,98;UBERON:0002371,3.78e-10,76;UBERON:0002193,2.05e-09,108;UBERON:0001474,2.27e-09,82;UBERON:0001017,1.81e-08,81;UBERON:0001049,5.88e-08,56;UBERON:0005068,5.88e-08,56;UBERON:0006241,5.88e-08,56;UBERON:0007135,5.88e-08,56;UBERON:0001016,7.21e-08,89;UBERON:0004765,1.12e-07,90;UBERON:0001434,1.40e-07,100;UBERON:0002405,3.87e-07,93 | |||
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| ||
|short_description=p8@JMJD1C | |||
}} | }} |
Latest revision as of 20:20, 18 September 2015
Short description: | p8@JMJD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_JMJD1C_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -438bp_to_AK095584_5end |
EntrezGene: | JMJD1C |
HGNC: | 12313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.01e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.01e-20 | 42 |
defensive cell | 6.36e-19 | 48 |
phagocyte | 6.36e-19 | 48 |
myeloid leukocyte | 5.79e-16 | 72 |
macrophage dendritic cell progenitor | 3.13e-15 | 61 |
leukocyte | 3.98e-15 | 136 |
monopoietic cell | 6.41e-15 | 59 |
monocyte | 6.41e-15 | 59 |
monoblast | 6.41e-15 | 59 |
promonocyte | 6.41e-15 | 59 |
nongranular leukocyte | 7.56e-15 | 115 |
granulocyte monocyte progenitor cell | 6.74e-13 | 67 |
myeloid lineage restricted progenitor cell | 3.14e-12 | 66 |
hematopoietic lineage restricted progenitor cell | 4.65e-12 | 120 |
hematopoietic stem cell | 5.14e-10 | 168 |
hematopoietic oligopotent progenitor cell | 2.34e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.34e-09 | 161 |
hematopoietic cell | 2.64e-09 | 177 |
myeloid cell | 1.76e-08 | 108 |
common myeloid progenitor | 1.76e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.66e-11 | 98 |
blood island | 6.66e-11 | 98 |
bone marrow | 3.78e-10 | 76 |
hemolymphoid system | 2.05e-09 | 108 |
bone element | 2.27e-09 | 82 |
central nervous system | 1.81e-08 | 81 |
neural tube | 5.88e-08 | 56 |
neural rod | 5.88e-08 | 56 |
future spinal cord | 5.88e-08 | 56 |
neural keel | 5.88e-08 | 56 |
nervous system | 7.21e-08 | 89 |
skeletal element | 1.12e-07 | 90 |
skeletal system | 1.40e-07 | 100 |
immune system | 3.87e-07 | 93 |