FFCP PHASE1:Hg19::chr12:20551244..20551248,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:20551244..20551248,+ | |||
|description=CAGE_peak_at_chr12:20551244..20551248,+ | |description=CAGE_peak_at_chr12:20551244..20551248,+ | ||
|id=chr12:20551244..20551248,+ | |id=chr12:20551244..20551248,+ | ||
|ontology_enrichment_celltype=CL:0002150!5.94e-07!3;CL:0000861!5.94e-07!3 | |ontology_enrichment_celltype=CL:0002150!5.94e-07!3;CL:0000861!5.94e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000222;3.25e-19;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.30e-19;1!UBERON:0005062;2.97e-19;4!UBERON:0007284;2.97e-19;4!UBERON:0006241;2.79e-07;3!UBERON:0003057;2.79e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3905;6.35e-09;9!DOID:4556;2.79e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3905,5.87e-09,9;DOID:4556,2.47e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.59e-10!115;UBERON:0007100!2.22e-07!27;UBERON:0003978!5.21e-07!3;UBERON:0009751!5.21e-07!3;UBERON:0000946!5.21e-07!3;UBERON:0002523!5.21e-07!3;UBERON:0005983!5.21e-07!3;UBERON:0002165!5.21e-07!3;UBERON:0002062!5.21e-07!3;UBERON:0007280!5.21e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.64e-25;3!UBERON:0000946;2.64e-25;3!UBERON:0000989;1.30e-19;1!UBERON:0002146;1.30e-19;1!UBERON:0002134;1.30e-19;1!UBERON:0008811;1.30e-19;1!UBERON:0005208;1.30e-19;1!UBERON:0005623;1.30e-19;1!UBERON:0004145;1.30e-19;1!UBERON:0005946;1.30e-19;1!UBERON:0005965;1.30e-19;1!UBERON:0002078;1.30e-19;1!UBERON:0002081;1.72e-10;2!UBERON:0002133;1.72e-10;2!UBERON:0010313;2.82e-08;10!UBERON:0000948;4.66e-08;22!UBERON:0004151;2.05e-07;3!UBERON:0002240;2.79e-07;3!UBERON:0005174;2.79e-07;3!UBERON:0001137;2.79e-07;3!UBERON:0007100;3.72e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.64e-25,3;UBERON:0009751,2.64e-25,3;UBERON:0000946,2.64e-25,3;UBERON:0002523,2.64e-25,3;UBERON:0005983,2.64e-25,3;UBERON:0002165,2.64e-25,3;UBERON:0002062,2.64e-25,3;UBERON:0007280,2.64e-25,3;UBERON:0002146,1.08e-19,1;UBERON:0005623,1.08e-19,1;UBERON:0000989,1.30e-19,1;UBERON:0008811,1.30e-19,1;UBERON:0006258,1.30e-19,1;UBERON:0005876,1.30e-19,1;UBERON:0004874,1.30e-19,1;UBERON:0002134,1.56e-19,1;UBERON:0005208,1.56e-19,1;UBERON:0005946,1.56e-19,1;UBERON:0005965,1.56e-19,1;UBERON:0002078,1.56e-19,1;UBERON:0004797,1.97e-11,7;UBERON:0002081,1.89e-10,2;UBERON:0002133,1.89e-10,2;UBERON:0010227,1.89e-10,2;UBERON:0010313,2.82e-08,10;UBERON:0002342,2.82e-08,10;UBERON:0005062,2.82e-08,10;UBERON:0000948,2.11e-07,24;UBERON:0005498,2.11e-07,24;UBERON:0004140,2.11e-07,24;UBERON:0009881,2.11e-07,24;UBERON:0004141,2.11e-07,24;UBERON:0003084,2.11e-07,24;UBERON:0007005,2.11e-07,24;UBERON:0004139,2.11e-07,24;UBERON:0004291,2.11e-07,24;UBERON:0004151,2.19e-07,3;UBERON:0004145,2.19e-07,3;UBERON:0002240,2.97e-07,3;UBERON:0005174,2.97e-07,3;UBERON:0001137,2.97e-07,3 | |||
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| ||
|short_description=p@chr12:20551244..20551248,+ | |short_description=p@chr12:20551244..20551248,+ | ||
}} | }} |
Latest revision as of 07:26, 24 July 2015
Short description: | p@chr12:20551244..20551248, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:20551244..20551248, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung carcinoma | 5.87e-09 | 9 |
lung large cell carcinoma | 2.47e-07 | 3 |