FFCP PHASE1:Hg19::chr17:8063633..8063652,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6844 | |EntrezGene=6844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12643 | |HGNC=12643 | ||
|TSSclassifier=strong | |||
|UniProt=Q69Z01 | |UniProt=Q69Z01 | ||
|association_with_transcript=294bp_to_AL050223_5end | |association_with_transcript=294bp_to_AL050223_5end | ||
|cluster_id=chr17:8063633..8063652,- | |||
|coexpression_cluster_id=C317 | |||
|description=CAGE_peak_13_at_VAMP2_5end | |description=CAGE_peak_13_at_VAMP2_5end | ||
|id=chr17:8063633..8063652,- | |id=chr17:8063633..8063652,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.65e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.20e-31!115;UBERON:0001049!1.72e-27!57;UBERON:0005068!1.72e-27!57;UBERON:0006241!1.72e-27!57;UBERON:0007135!1.72e-27!57;UBERON:0001017!4.98e-25!82;UBERON:0000955!1.00e-23!69;UBERON:0006238!1.00e-23!69;UBERON:0005743!1.16e-23!86;UBERON:0002780!3.29e-23!41;UBERON:0001890!3.29e-23!41;UBERON:0006240!3.29e-23!41;UBERON:0000073!2.08e-22!94;UBERON:0001016!2.08e-22!94;UBERON:0002616!2.43e-22!59;UBERON:0003080!3.24e-22!42;UBERON:0003075!4.15e-21!86;UBERON:0007284!4.15e-21!86;UBERON:0002346!1.59e-20!90;UBERON:0002020!2.13e-18!34;UBERON:0003528!2.13e-18!34;UBERON:0001893!3.19e-18!34;UBERON:0002791!1.56e-17!33;UBERON:0001869!3.41e-17!32;UBERON:0002619!5.47e-17!22;UBERON:0000956!5.45e-16!25;UBERON:0000203!5.45e-16!25;UBERON:0001950!2.53e-15!20;UBERON:0000033!5.56e-15!123;UBERON:0003056!8.62e-15!61;UBERON:0000153!2.36e-14!129;UBERON:0007811!2.36e-14!129;UBERON:0004121!7.29e-14!169;UBERON:0000924!9.28e-14!173;UBERON:0006601!9.28e-14!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.61e-58;22!UBERON:0001950;4.48e-51;20!UBERON:0000956;9.37e-51;25!UBERON:0000203;9.37e-51;25!UBERON:0001869;8.53e-42;32!UBERON:0002780;2.58e-40;41!UBERON:0001890;2.58e-40;41!UBERON:0002791;1.51e-37;32!UBERON:0001893;2.31e-37;34!UBERON:0003528;1.39e-36;34!UBERON:0002020;1.39e-36;34!UBERON:0000073;2.41e-32;53!UBERON:0002616;2.41e-32;53!UBERON:0000955;1.53e-25;68!UBERON:0001017;7.54e-24;75!UBERON:0000200;2.44e-22;6!UBERON:0001016;1.50e-18;83!UBERON:0002021;9.78e-18;5!UBERON:0001872;2.86e-17;5!UBERON:0002784;4.71e-15;4!UBERON:0001871;5.43e-13;6!UBERON:0001894;6.98e-13;7!UBERON:0003296;4.61e-09;4!UBERON:0010133;4.61e-09;4!UBERON:0002771;5.27e-09;2!UBERON:0002702;7.29e-09;2!UBERON:0001905;7.71e-09;2!UBERON:0002757;7.71e-09;2!UBERON:0010134;7.71e-09;2!UBERON:0005408;7.71e-09;2!UBERON:0001899;7.71e-09;2!UBERON:0007023;8.45e-09;114!UBERON:0001954;8.64e-09;2!UBERON:0003022;8.64e-09;2!UBERON:0002421;8.64e-09;2!UBERON:0002600;8.64e-09;2!UBERON:0011216;9.74e-09;132!UBERON:0001897;6.34e-08;2!UBERON:0010225;6.34e-08;2!UBERON:0000349;2.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.97e-61,56;UBERON:0005068,1.97e-61,56;UBERON:0006241,1.97e-61,56;UBERON:0007135,1.97e-61,56;UBERON:0002619,2.67e-58,22;UBERON:0000073,5.27e-57,53;UBERON:0002616,5.27e-57,53;UBERON:0002780,3.98e-56,41;UBERON:0001890,3.98e-56,41;UBERON:0003080,3.98e-56,41;UBERON:0006240,3.98e-56,41;UBERON:0000955,1.09e-51,68;UBERON:0006238,1.09e-51,68;UBERON:0001950,2.81e-51,20;UBERON:0001017,3.39e-51,81;UBERON:0000956,5.79e-51,25;UBERON:0000203,5.79e-51,25;UBERON:0001869,1.33e-47,32;UBERON:0001016,2.76e-45,89;UBERON:0003528,9.86e-45,34;UBERON:0002020,9.86e-45,34;UBERON:0001893,1.50e-44,34;UBERON:0002791,2.43e-43,32;UBERON:0003075,3.86e-42,82;UBERON:0007284,3.86e-42,82;UBERON:0002346,8.33e-40,86;UBERON:0003056,9.83e-36,61;UBERON:0007023,1.88e-32,114;UBERON:0010371,1.65e-31,104;UBERON:0010314,7.96e-25,132;UBERON:0000200,2.94e-22,6;UBERON:0004121,5.82e-21,171;UBERON:0000924,5.82e-21,171;UBERON:0006601,5.82e-21,171;UBERON:0002021,1.09e-17,5;UBERON:0001872,1.55e-17,5;UBERON:0011216,2.93e-17,223;UBERON:0002784,4.06e-15,4;UBERON:0000025,2.26e-14,192;UBERON:0001871,3.53e-13,6;UBERON:0001894,7.16e-13,7;UBERON:0006222,7.16e-13,7;UBERON:0004111,9.66e-11,240;UBERON:0002771,5.22e-09,2;UBERON:0003296,6.01e-09,4;UBERON:0010133,6.01e-09,4;UBERON:0002702,6.81e-09,2;UBERON:0001954,7.92e-09,2;UBERON:0003022,7.92e-09,2;UBERON:0002421,7.92e-09,2;UBERON:0002600,7.92e-09,2;UBERON:0001905,9.21e-09,2;UBERON:0002757,9.21e-09,2;UBERON:0010134,9.21e-09,2;UBERON:0005408,9.21e-09,2;UBERON:0001899,9.21e-09,2;UBERON:0003076,2.62e-08,15;UBERON:0003057,2.62e-08,15;UBERON:0001897,4.64e-08,2;UBERON:0010225,4.64e-08,2;UBERON:0000349,1.75e-07,5 | |||
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| ||
|short_description=p13@VAMP2 | |short_description=p13@VAMP2 | ||
}} | }} |
Latest revision as of 13:26, 18 September 2015
Short description: | p13@VAMP2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_VAMP2_5end |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | 294bp_to_AL050223_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | Q69Z01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data