FFCP PHASE1:Hg19::chr12:81110684..81110700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4617 | |EntrezGene=4617 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7565 | |HGNC=7565 | ||
|TSSclassifier=strong | |||
|UniProt=P13349 | |UniProt=P13349 | ||
|association_with_transcript=0bp_to_ENST00000228644_5end | |association_with_transcript=0bp_to_ENST00000228644_5end | ||
|cluster_id=chr12:81110684..81110700,+ | |||
|coexpression_cluster_id=C397 | |||
|description=CAGE_peak_1_at_MYF5_5end | |description=CAGE_peak_1_at_MYF5_5end | ||
|id=chr12:81110684..81110700,+ | |id=chr12:81110684..81110700,+ | ||
|ontology_enrichment_celltype=CL:0000188!9.02e-25!9;CL:0000515!3.93e-13!4;CL:0000680!2.40e-10!57;CL:0000056!2.40e-10!57;CL:0000355!2.40e-10!57;CL:0000594!9.79e-09!3;CL:0000183!3.04e-07!59;CL:0002262!3.36e-07!2;CL:1000398!3.36e-07!2;CL:0000187!5.42e-07!54 | |ontology_enrichment_celltype=CL:0000188!9.02e-25!9;CL:0000515!3.93e-13!4;CL:0000680!2.40e-10!57;CL:0000056!2.40e-10!57;CL:0000355!2.40e-10!57;CL:0000594!9.79e-09!3;CL:0000183!3.04e-07!59;CL:0002262!3.36e-07!2;CL:1000398!3.36e-07!2;CL:0000187!5.42e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000188;1.83e-29;9!CL:0000056;4.63e-24;4!CL:0000680;1.11e-20;7!CL:0000515;1.45e-18;3!CL:0002262;1.53e-12;2!CL:1000398;1.53e-12;2!CL:0002590;2.04e-08;3!CL:0000228;3.17e-07;1!CL:0002372;3.17e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.79e-29,9;CL:0000515,4.63e-24,4;CL:0002262,1.58e-12,2;CL:1000398,1.58e-12,2;CL:0000680,1.17e-11,58;CL:0000056,1.17e-11,58;CL:0000355,1.17e-11,58;CL:0002590,2.01e-08,3;CL:0000228,3.17e-07,1;CL:0002372,3.17e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000515;4.63e-24;4!CL:0000355;1.20e-07;58!UBERON:0004874;8.02e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;2.23e-57;16!UBERON:0002036;2.23e-57;16!UBERON:0002385;1.39e-27;31!UBERON:0001015;1.39e-27;31!UBERON:0000383;1.39e-27;31!UBERON:0001281;1.53e-12;2!UBERON:0003497;1.53e-12;2!UBERON:0003909;1.53e-12;2!UBERON:0003835;1.53e-12;2!UBERON:0000341;1.77e-12;2!UBERON:0001905;5.49e-12;2!UBERON:0002757;5.49e-12;2!UBERON:0010134;5.49e-12;2!UBERON:0005408;5.49e-12;2!UBERON:0001899;5.49e-12;2!UBERON:0001280;1.21e-08;3!UBERON:0004647;1.21e-08;3!UBERON:0001723;1.33e-08;3!UBERON:0001033;1.33e-08;3!UBERON:0002426;6.02e-07;1!UBERON:0003831;6.02e-07;1!UBERON:0003898;6.02e-07;1!UBERON:0004830;6.02e-07;1!UBERON:0003830;6.02e-07;1!UBERON:0005175;6.02e-07;1!UBERON:0001774;6.02e-07;1!UBERON:0001103;6.02e-07;1!UBERON:0007029;8.02e-07;1!UBERON:0000989;8.02e-07;1!UBERON:0008811;8.02e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.28e-17,62;UBERON:0002036,2.28e-17,62;UBERON:0003082,2.28e-17,62;UBERON:0002385,1.00e-16,64;UBERON:0001015,1.00e-16,64;UBERON:0000383,1.00e-16,64;UBERON:0002329,9.18e-15,71;UBERON:0003059,9.18e-15,71;UBERON:0007282,9.18e-15,71;UBERON:0004290,9.18e-15,71;UBERON:0009618,9.18e-15,71;UBERON:0003077,1.63e-14,72;UBERON:0007285,1.63e-14,72;UBERON:0007524,2.84e-14,73;UBERON:0005256,4.37e-14,122;UBERON:0007503,3.73e-13,78;UBERON:0001281,1.58e-12,2;UBERON:0003497,1.58e-12,2;UBERON:0003909,1.58e-12,2;UBERON:0003835,1.58e-12,2;UBERON:0000341,1.77e-12,2;UBERON:0000486,3.57e-12,83;UBERON:0001905,5.49e-12,2;UBERON:0002757,5.49e-12,2;UBERON:0010134,5.49e-12,2;UBERON:0005408,5.49e-12,2;UBERON:0001899,5.49e-12,2;UBERON:0000490,7.51e-11,148;UBERON:0003104,9.88e-10,160;UBERON:0009142,9.88e-10,160;UBERON:0001280,1.23e-08,3;UBERON:0004647,1.23e-08,3;UBERON:0005171,1.23e-08,3;UBERON:0001723,1.33e-08,3;UBERON:0001033,1.33e-08,3;UBERON:0010056,1.33e-08,3;UBERON:0002100,5.99e-08,199;UBERON:0002426,6.38e-07,1;UBERON:0003831,6.38e-07,1;UBERON:0003898,6.38e-07,1;UBERON:0004830,6.38e-07,1;UBERON:0003830,6.38e-07,1;UBERON:0005175,6.38e-07,1;UBERON:0001774,6.38e-07,1;UBERON:0001103,6.38e-07,1;UBERON:0010084,6.38e-07,1;UBERON:0000989,7.57e-07,1;UBERON:0008811,7.57e-07,1;UBERON:0006258,7.57e-07,1;UBERON:0005876,7.57e-07,1;UBERON:0004874,7.57e-07,1;UBERON:0007029,8.02e-07,1 | |||
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| ||
|short_description=p1@MYF5 | |short_description=p1@MYF5 | ||
}} | }} |
Latest revision as of 01:29, 25 September 2015
Short description: | p1@MYF5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYF5_5end |
Coexpression cluster: | C397_mesenchymal_Myoblast_rhabdomyosarcoma_Hepatic_Melanocyte_astrocytoma_Skeletal |
Association with transcript: | 0bp_to_ENST00000228644_5end |
EntrezGene: | MYF5 |
HGNC: | 7565 |
UniProt: | P13349 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.79e-29 | 9 |
skeletal muscle myoblast | 4.63e-24 | 4 |
endothelial cell of sinusoid | 1.58e-12 | 2 |
endothelial cell of hepatic sinusoid | 1.58e-12 | 2 |
muscle precursor cell | 1.17e-11 | 58 |
myoblast | 1.17e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-11 | 58 |
smooth muscle cell of the brain vasculature | 2.01e-08 | 3 |
multinucleate cell | 3.17e-07 | 1 |
myotube | 3.17e-07 | 1 |