FFCP PHASE1:Hg19::chr12:89919767..89919802,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:89919767..89919802,+ | |||
|description=CAGE_peak_at_chr12:89919767..89919802,+ | |description=CAGE_peak_at_chr12:89919767..89919802,+ | ||
|id=chr12:89919767..89919802,+ | |id=chr12:89919767..89919802,+ | ||
|ontology_enrichment_celltype=CL:0000860!2.93e-18!45;CL:0002057!1.00e-17!42;CL:0000766!3.22e-12!76;CL:0002009!4.40e-12!65;CL:0000557!8.78e-12!71;CL:0002194!1.15e-10!63;CL:0000576!1.15e-10!63;CL:0000040!1.15e-10!63;CL:0000559!1.15e-10!63;CL:0000763!2.14e-10!112;CL:0000049!2.14e-10!112;CL:0000738!2.86e-10!140;CL:0000839!3.93e-10!70;CL:0000037!3.32e-09!172;CL:0000566!3.32e-09!172;CL:0002032!3.38e-09!165;CL:0000837!3.38e-09!165;CL:0002087!8.87e-09!119;CL:0002031!1.49e-08!124;CL:0000988!2.43e-08!182 | |ontology_enrichment_celltype=CL:0000860!2.93e-18!45;CL:0002057!1.00e-17!42;CL:0000766!3.22e-12!76;CL:0002009!4.40e-12!65;CL:0000557!8.78e-12!71;CL:0002194!1.15e-10!63;CL:0000576!1.15e-10!63;CL:0000040!1.15e-10!63;CL:0000559!1.15e-10!63;CL:0000763!2.14e-10!112;CL:0000049!2.14e-10!112;CL:0000738!2.86e-10!140;CL:0000839!3.93e-10!70;CL:0000037!3.32e-09!172;CL:0000566!3.32e-09!172;CL:0002032!3.38e-09!165;CL:0000837!3.38e-09!165;CL:0002087!8.87e-09!119;CL:0002031!1.49e-08!124;CL:0000988!2.43e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0002262;1.59e-07;2!CL:0000771;1.59e-07;2!CL:1000398;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.64e-07,2;CL:1000398,1.64e-07,2;CL:0000771,1.87e-07,2;CL:0000860,2.74e-07,42;CL:0002057,2.74e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.12e-14;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.64e-17;3!DOID:127;1.64e-17;3!DOID:3371;3.07e-14;1!DOID:4549;3.07e-14;1!DOID:5861;3.07e-14;1!DOID:6496;3.07e-14;1!DOID:0060072;2.21e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.09e-18,3;DOID:127,7.09e-18,3;DOID:3371,3.08e-14,1;DOID:4549,3.08e-14,1;DOID:5861,3.08e-14,1;DOID:6496,3.08e-14,1;DOID:0060072,1.18e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0001474!2.56e-09!86;UBERON:0002371!2.79e-09!80;UBERON:0002390!5.38e-09!102;UBERON:0003061!5.38e-09!102;UBERON:0002193!8.55e-08!112;UBERON:0002405!3.53e-07!115;UBERON:0004765!5.52e-07!101;UBERON:0001434!5.52e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.12e-14;1!UBERON:0001785;9.12e-14;1!UBERON:0002464;9.12e-14;1!UBERON:0004904;9.12e-14;1!UBERON:0001021;9.12e-14;1!UBERON:0003714;1.59e-07;2!UBERON:0001281;1.59e-07;2!UBERON:0005162;1.59e-07;2!UBERON:0000122;1.59e-07;2!UBERON:0003497;1.59e-07;2!UBERON:0003909;1.59e-07;2!UBERON:0003835;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.58e-14,1;UBERON:0001785,8.58e-14,1;UBERON:0002464,8.58e-14,1;UBERON:0004904,8.58e-14,1;UBERON:0001021,8.58e-14,1;UBERON:0003902,8.58e-14,1;UBERON:0005425,8.58e-14,1;UBERON:0003714,1.54e-07,2;UBERON:0005162,1.54e-07,2;UBERON:0000122,1.54e-07,2;UBERON:0001281,1.64e-07,2;UBERON:0003497,1.64e-07,2;UBERON:0003909,1.64e-07,2;UBERON:0003835,1.64e-07,2 | |||
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| ||
|short_description=p@chr12:89919767..89919802,+ | |short_description=p@chr12:89919767..89919802,+ | ||
}} | }} |
Latest revision as of 13:17, 24 July 2015
Short description: | p@chr12:89919767..89919802, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:89919767..89919802, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.64e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.64e-07 | 2 |
eosinophil | 1.87e-07 | 2 |
classical monocyte | 2.74e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.74e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 8.58e-14 | 1 |
cranial nerve | 8.58e-14 | 1 |
nerve trunk | 8.58e-14 | 1 |
nerve connecting eye with brain | 8.58e-14 | 1 |
nerve | 8.58e-14 | 1 |
retinal neural layer | 8.58e-14 | 1 |
presumptive neural retina | 8.58e-14 | 1 |
neural tissue | 1.54e-07 | 2 |
multi cell component structure | 1.54e-07 | 2 |
neuron projection bundle | 1.54e-07 | 2 |
hepatic sinusoid | 1.64e-07 | 2 |
abdomen blood vessel | 1.64e-07 | 2 |
sinusoid | 1.64e-07 | 2 |
abdominal segment blood vessel | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.09e-18 | 3 |
leiomyoma | 7.09e-18 | 3 |
chondrosarcoma | 3.08e-14 | 1 |
extraosseous chondrosarcoma | 3.08e-14 | 1 |
myxoid chondrosarcoma | 3.08e-14 | 1 |
extraskeletal myxoid chondrosarcoma | 3.08e-14 | 1 |
benign neoplasm | 1.18e-13 | 4 |