FFCP PHASE1:Hg19::chr11:116728814..116728821,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:116728814..116728821,-
|short_description=p@chr11:116728814..116728821,-
|description=CAGE_peak_at_chr11:116728814..116728821,-
|association_with_transcri...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:116728814..116728821,- | |||
|description=CAGE_peak_at_chr11:116728814..116728821,- | |||
|id=chr11:116728814..116728821,- | |||
|ontology_enrichment_celltype=CL:0002594!2.10e-11!4;CL:0000359!2.68e-08!32;CL:0002592!2.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002592;1.07e-33;3!CL:0002594;1.43e-25;4!CL:0000359;6.61e-18;32!CL:0000077;1.60e-12;19!CL:0000192;1.42e-08;43!CL:0000393;3.01e-07;61!CL:0000211;3.01e-07;61!CL:0002494;3.90e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.50e-33,3;CL:0002594,1.26e-25,4;CL:0000359,1.87e-19,32;CL:0000192,1.46e-14,43;CL:0000514,1.46e-14,43;CL:0000222,4.25e-13,121;CL:0000077,1.45e-12,19;CL:0000187,1.91e-11,55;CL:0000680,7.25e-11,58;CL:0000056,7.25e-11,58;CL:0000355,7.25e-11,58;CL:0000393,2.42e-10,61;CL:0000211,2.42e-10,61;CL:0002494,4.14e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.42e-08;43!CL:0000355;2.53e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!2.10e-11!4;UBERON:0001637!2.66e-09!42;UBERON:0003509!2.66e-09!42;UBERON:0004572!2.66e-09!42;UBERON:0003498!5.86e-09!5;UBERON:0005985!5.86e-09!5;UBERON:0001621!2.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;1.07e-33;3!UBERON:0005985;1.07e-33;3!UBERON:0001621;1.07e-33;3!UBERON:0001310;1.43e-25;4!UBERON:0010260;5.83e-12;9!UBERON:0001637;1.00e-11;42!UBERON:0003509;1.00e-11;42!UBERON:0004572;1.00e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,1.50e-33,3;UBERON:0001310,1.26e-25,4;UBERON:0003498,1.34e-20,5;UBERON:0005985,1.34e-20,5;UBERON:0001637,6.66e-15,42;UBERON:0003509,6.66e-15,42;UBERON:0004572,6.66e-15,42;UBERON:0010260,5.52e-12,9;UBERON:0007500,1.10e-10,59;UBERON:0001981,1.10e-10,59;UBERON:0004537,1.10e-10,59;UBERON:0006965,1.10e-10,59;UBERON:0001134,3.52e-10,62;UBERON:0002036,3.52e-10,62;UBERON:0003082,3.52e-10,62;UBERON:0002385,7.21e-10,64;UBERON:0001015,7.21e-10,64;UBERON:0000383,7.21e-10,64;UBERON:0000055,2.67e-09,68;UBERON:0002329,6.48e-09,71;UBERON:0003059,6.48e-09,71;UBERON:0007282,6.48e-09,71;UBERON:0004290,6.48e-09,71;UBERON:0009618,6.48e-09,71;UBERON:0003077,8.56e-09,72;UBERON:0007285,8.56e-09,72;UBERON:0007524,1.12e-08,73;UBERON:0002049,3.94e-08,78;UBERON:0007503,3.94e-08,78;UBERON:0007798,3.94e-08,78;UBERON:0000486,1.19e-07,83;UBERON:0004872,1.19e-07,83;UBERON:0004573,2.26e-07,33;UBERON:0004571,2.26e-07,33 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,6.10073421020206,2.99918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06461206063404,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,1.01091240786658,0,1.26377536871694,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.405820753925408,1.239293992399,0,0,0,1.426684205925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,6.10073421020206,2.99918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06461206063404,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,1.01091240786658,0,1.26377536871694,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.405820753925408,1.239293992399,0,0,0,1.426684205925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:116728814..116728821,- | |||
}} | }} |
Latest revision as of 18:29, 23 July 2015
Short description: | p@chr11:116728814..116728821, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116728814..116728821, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.50e-33 | 3 |
smooth muscle cell of the umbilical artery | 1.26e-25 | 4 |
vascular associated smooth muscle cell | 1.87e-19 | 32 |
smooth muscle cell | 1.46e-14 | 43 |
smooth muscle myoblast | 1.46e-14 | 43 |
mesodermal cell | 4.25e-13 | 121 |
mesothelial cell | 1.45e-12 | 19 |
muscle cell | 1.91e-11 | 55 |
muscle precursor cell | 7.25e-11 | 58 |
myoblast | 7.25e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.25e-11 | 58 |
electrically responsive cell | 2.42e-10 | 61 |
electrically active cell | 2.42e-10 | 61 |
cardiocyte | 4.14e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 1.50e-33 | 3 |
umbilical artery | 1.26e-25 | 4 |
heart blood vessel | 1.34e-20 | 5 |
coronary vessel | 1.34e-20 | 5 |
artery | 6.66e-15 | 42 |
arterial blood vessel | 6.66e-15 | 42 |
arterial system | 6.66e-15 | 42 |
umbilical blood vessel | 5.52e-12 | 9 |
epithelial tube open at both ends | 1.10e-10 | 59 |
blood vessel | 1.10e-10 | 59 |
blood vasculature | 1.10e-10 | 59 |
vascular cord | 1.10e-10 | 59 |
skeletal muscle tissue | 3.52e-10 | 62 |
striated muscle tissue | 3.52e-10 | 62 |
myotome | 3.52e-10 | 62 |
muscle tissue | 7.21e-10 | 64 |
musculature | 7.21e-10 | 64 |
musculature of body | 7.21e-10 | 64 |
vessel | 2.67e-09 | 68 |
somite | 6.48e-09 | 71 |
presomitic mesoderm | 6.48e-09 | 71 |
presumptive segmental plate | 6.48e-09 | 71 |
dermomyotome | 6.48e-09 | 71 |
trunk paraxial mesoderm | 6.48e-09 | 71 |
paraxial mesoderm | 8.56e-09 | 72 |
presumptive paraxial mesoderm | 8.56e-09 | 72 |
dense mesenchyme tissue | 1.12e-08 | 73 |
vasculature | 3.94e-08 | 78 |
epithelial vesicle | 3.94e-08 | 78 |
vascular system | 3.94e-08 | 78 |
multilaminar epithelium | 1.19e-07 | 83 |
splanchnic layer of lateral plate mesoderm | 1.19e-07 | 83 |
systemic artery | 2.26e-07 | 33 |
systemic arterial system | 2.26e-07 | 33 |