FFCP PHASE1:Hg19::chr11:1774653..1774680,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:1774653..1774680,-
|short_description=p@chr11:1774653..1774680,-
|description=CAGE_peak_at_chr11:1774653..1774680,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:1774653..1774680,- | |||
|coexpression_cluster_id=C587 | |||
|description=CAGE_peak_at_chr11:1774653..1774680,- | |||
|id=chr11:1774653..1774680,- | |||
|ontology_enrichment_celltype=CL:0000766!1.33e-10!76;CL:0000839!1.38e-10!70;CL:0002194!4.68e-10!63;CL:0000576!4.68e-10!63;CL:0000040!4.68e-10!63;CL:0000559!4.68e-10!63;CL:0000557!6.92e-10!71;CL:0002009!3.78e-09!65;CL:0002057!3.31e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.95e-11;39!CL:0000234;2.95e-11;39!CL:0000860;2.67e-09;33!CL:0002057;2.67e-09;33!CL:0000235;7.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.05e-13,66;CL:0000766,1.28e-13,72;CL:0000557,2.98e-13,67;CL:0002194,1.67e-12,59;CL:0000576,1.67e-12,59;CL:0000040,1.67e-12,59;CL:0000559,1.67e-12,59;CL:0000473,7.74e-12,48;CL:0000234,7.74e-12,48;CL:0002009,1.29e-11,61;CL:0000860,4.91e-08,42;CL:0002057,4.91e-08,42;CL:0000235,7.87e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.85e-10!115;UBERON:0002371!6.02e-10!80;UBERON:0001474!1.10e-08!86;UBERON:0002193!8.35e-08!112;UBERON:0004765!1.15e-07!101;UBERON:0001434!1.15e-07!101;UBERON:0000468!1.88e-07!659;UBERON:0002204!1.94e-07!167;UBERON:0002390!2.40e-07!102;UBERON:0003061!2.40e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.88e-13,76;UBERON:0001474,4.80e-12,82;UBERON:0004765,3.28e-11,90;UBERON:0002405,3.66e-11,93;UBERON:0001434,1.08e-10,100;UBERON:0002390,1.16e-09,98;UBERON:0003061,1.16e-09,98;UBERON:0002193,2.40e-09,108;UBERON:0000926,2.47e-09,315;UBERON:0004120,2.47e-09,315;UBERON:0006603,2.47e-09,315;UBERON:0002204,5.49e-08,167 | |||
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| ||
|short_description=p@chr11:1774653..1774680,- | |||
}} | }} |
Latest revision as of 20:30, 23 July 2015
Short description: | p@chr11:1774653..1774680, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1774653..1774680, - |
Coexpression cluster: | C587_Osteoblast_Monocytederived_CD14_Macrophage_leiomyoma_Adipocyte_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.05e-13 | 66 |
myeloid leukocyte | 1.28e-13 | 72 |
granulocyte monocyte progenitor cell | 2.98e-13 | 67 |
monopoietic cell | 1.67e-12 | 59 |
monocyte | 1.67e-12 | 59 |
monoblast | 1.67e-12 | 59 |
promonocyte | 1.67e-12 | 59 |
defensive cell | 7.74e-12 | 48 |
phagocyte | 7.74e-12 | 48 |
macrophage dendritic cell progenitor | 1.29e-11 | 61 |
classical monocyte | 4.91e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.91e-08 | 42 |
macrophage | 7.87e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.88e-13 | 76 |
bone element | 4.80e-12 | 82 |
skeletal element | 3.28e-11 | 90 |
immune system | 3.66e-11 | 93 |
skeletal system | 1.08e-10 | 100 |
hematopoietic system | 1.16e-09 | 98 |
blood island | 1.16e-09 | 98 |
hemolymphoid system | 2.40e-09 | 108 |
mesoderm | 2.47e-09 | 315 |
mesoderm-derived structure | 2.47e-09 | 315 |
presumptive mesoderm | 2.47e-09 | 315 |
musculoskeletal system | 5.49e-08 | 167 |