FFCP PHASE1:Hg19::chr14:57735853..57735860,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55745 | |EntrezGene=55745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20192 | |HGNC=20192 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_ENST00000554213_5end | |association_with_transcript=41bp_to_ENST00000554213_5end | ||
|cluster_id=chr14:57735853..57735860,+ | |||
|description=CAGE_peak_10_at_MUDENG_5end | |description=CAGE_peak_10_at_MUDENG_5end | ||
|id=chr14:57735853..57735860,+ | |id=chr14:57735853..57735860,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.78e-13!53;CL:0000051!1.78e-13!53;CL:0000838!3.20e-13!52;CL:0000084!2.08e-12!25;CL:0000827!2.08e-12!25;CL:0000791!7.49e-12!18;CL:0000789!7.49e-12!18;CL:0002420!7.49e-12!18;CL:0002419!7.49e-12!18;CL:0000790!7.49e-12!18 | |ontology_enrichment_celltype=CL:0000542!1.78e-13!53;CL:0000051!1.78e-13!53;CL:0000838!3.20e-13!52;CL:0000084!2.08e-12!25;CL:0000827!2.08e-12!25;CL:0000791!7.49e-12!18;CL:0000789!7.49e-12!18;CL:0002420!7.49e-12!18;CL:0002419!7.49e-12!18;CL:0000790!7.49e-12!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.75e-27;18!CL:0000789;8.75e-27;18!CL:0002419;8.75e-27;18!CL:0000624;7.40e-26;6!CL:0000084;1.70e-23;25!CL:0000542;1.87e-14;53!CL:0000625;1.98e-09;11!CL:0000898;2.74e-09;3!CL:0000623;2.74e-09;3!CL:0000895;1.39e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.36e-27,18;CL:0000789,4.36e-27,18;CL:0002420,4.36e-27,18;CL:0002419,4.36e-27,18;CL:0000790,4.36e-27,18;CL:0000624,3.43e-26,6;CL:0000084,1.03e-23,25;CL:0000827,1.03e-23,25;CL:0000838,9.83e-21,52;CL:0000542,2.73e-20,53;CL:0000051,2.73e-20,53;CL:0000625,1.66e-09,11;CL:0000898,4.01e-09,3;CL:0000623,5.35e-09,3;CL:0000825,5.35e-09,3;CL:0002032,6.99e-09,161;CL:0000837,6.99e-09,161;CL:0002031,1.33e-08,120;CL:0000738,1.79e-08,136;CL:0000037,2.30e-08,168;CL:0002087,8.76e-08,115;CL:0000988,9.22e-08,177;CL:0000810,2.04e-07,1;CL:0000895,2.04e-07,1;CL:0002436,2.04e-07,1;CL:0002427,2.04e-07,1;CL:0002428,2.04e-07,1;CL:0002429,2.04e-07,1;CL:0002433,2.04e-07,1;CL:0002431,2.04e-07,1;CL:0002432,2.04e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;8.75e-27;18!CL:0000051;1.87e-14;53!CL:0002427;1.39e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.29e-14!57;UBERON:0005068!1.29e-14!57;UBERON:0006241!1.29e-14!57;UBERON:0007135!1.29e-14!57;UBERON:0002616!8.49e-12!59;UBERON:0005743!6.96e-11!86;UBERON:0002780!7.89e-11!41;UBERON:0001890!7.89e-11!41;UBERON:0006240!7.89e-11!41;UBERON:0000955!1.15e-10!69;UBERON:0006238!1.15e-10!69;UBERON:0001017!1.80e-10!82;UBERON:0001869!2.42e-10!32;UBERON:0003080!2.56e-10!42;UBERON:0002020!3.82e-10!34;UBERON:0003528!3.82e-10!34;UBERON:0001893!7.90e-10!34;UBERON:0002791!3.22e-09!33;UBERON:0002619!4.19e-09!22;UBERON:0000073!8.69e-09!94;UBERON:0001016!8.69e-09!94;UBERON:0003075!1.21e-08!86;UBERON:0007284!1.21e-08!86;UBERON:0002346!3.58e-08!90;UBERON:0000956!5.79e-08!25;UBERON:0000203!5.79e-08!25;UBERON:0007023!6.15e-08!115;UBERON:0001950!8.28e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;3.69e-10;6!UBERON:0001896;1.40e-09;3!UBERON:0005290;1.40e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,3.27e-10,6;UBERON:0001896,1.73e-09,3;UBERON:0005290,1.73e-09,3;UBERON:0010096,1.73e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0.246301768349837,0.157421562627358,0,0.767658796194425,0.154816123316076,0,0,0,1.00707360754392,0.853015394924529,0,0,0,0.651032612147555,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,1.09227722252426,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,1.57367816091066,1.96505381374582,1.64481199199607,0,1.30368906653436,1.4203434172042,0,0,0.589211814949674,0,0.812411591295047,0.128091319725675,0.260118695119756,0.164437904603676,0,0.579606171470105,0.593146252648242,0.802622484269139,1.04535523804977,0.566546713487831,1.14966148080576,0.34362744548263,1.01207876807801,0.637130828648193,0,0,0.903450714466637,0.639933055772092,2.49861453104692,0.473554504088034,1.64225599384209,1.81446068902259,1.06976078313403,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,2.63560834872127,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.310983165046111,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0.482022059766964,0.661763836394364,1.30727666455444,0,0.134831308160164,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.882926198829301,1.35287282397425,0,0.219500570817251,0,0.100528972411631,0.277765335475589,0,0,0,0,0.234817388471643,0.144366447761074,0.462985512576611,0,0,0,0,0.702012795417713,0,0.93733833986777,0.503946384596579,0.567100388969546,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0.784596007954691,1.18218456121156,0.862510299438069,1.02674429023799,0.508189248444927,0,0,0.167516265334349,0,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.213455115606889,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.241718899183244,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0,0.638063562472921,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,1.70918513803957,0,0,0.185803175125719,0,0.497992903438899,0.318852545457645,0,0.191505370132367,0,0,0,0.228234679033192,0.156679895773023,2.50634477090067,0.677167111206413,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0.614321404198464,0,0.703347082052564,0,0.16480387422676,0,0,0.552567831062295,0,0.102268682502155,0,0,0.0898683511473268,0.537063524026827,0.511572370226872,0,0,0,0,0.927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0.482385754501632,0,0.331737779793674,0.591095237907095,0.658156191461918,0.10893846351899,0.139423744278603,0,0,0.46112780877612,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,2.04386596391473,0,0.166211681900156,0,0.784250137270958,0.167821586975843,0,0.158936578980379,0,0.489698424477443,0,0,0,0.0884575645033392,0.611030144933625,0.889563386041866,0.370691816839509,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0.60129367765797,0,0,0,0,0,0.284609546029793,0.138674673013139,0.347119476670262,0.293977192243133,0.435296032902013,0.17472666824203,0,0.387025325156341,0.146178634172371,0.246346371159628,0,0.0882561266915003,0,0,0,0.823040347426423,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0.288109595976299,0.124252535565433,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0.86661500537946,0.494495150286999,0.202210631562555,0.295282444544246,0.0846733320657845,1.59045937961861,0.544813624446302,0,0.275078873194468,0,0.899895566206002,1.5476039091159,0.485996453264197,0,0.709251365692784,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.904980694530854,0.26446520348538,0,0,0,0,0,0,0,0.487170393523584,0.638341257770182,0,0,0,0,0,1.77213635993397,0.732157589411779,0.876336514945499,2.86704597845036,1.10929051536852,0.620964029413834,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0.228840068396924,0.151230923763239,0.310874401165561,0,0,0.899606224327209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,1.50109113962448,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0.584580926518165,0,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.371807292777007,0,0,0.157723490002507,0,0,0,0.513833800771676,1.41696576325585,0.319267718114302,0.615349092722265,0.252071696221718,0.345786262321089,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0.810451015420736,0,0.620060389503552,0.634158101939068,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0.576169937778896,0,1.69924332442079,0.394636641377094,0,0.778619813244484,0,0.785577949580009,0,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0.207216164163037,0.85359238546975,0,0,0,0,0,0.4582137370881,0,0,0,0.294450700845729,0.975343399858155,0,0,0,0,0,0,0,0.11294608203896,0,0.452888530700021,0.540219106755613,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0.0939839179798536,0.322289439867886,0.599646935549574,0.357107877211315,0,0.401206833445841,0,0,0,0,0.407948941145488,0.436350690340377,0,0,0,0.432626562123789,0.126166424835079,0.327796715891087,0,0.203977659483963,0,0.275684698604535,0,0.227336094654718,0.267964130156178,1.65833887891756,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.372448285775147,0,0,0,0.217716747896961,0,0,0,0,0.162806537221949,0.106727345877715,0,0,0,0.122241444182866,0,0.665756774185513,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0.246301768349837,0.157421562627358,0,0.767658796194425,0.154816123316076,0,0,0,1.00707360754392,0.853015394924529,0,0,0,0.651032612147555,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,1.09227722252426,0,0.853460445133014,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,1.57367816091066,1.96505381374582,1.64481199199607,0,1.30368906653436,1.4203434172042,0,0,0.589211814949674,0,0.812411591295047,0.128091319725675,0.260118695119756,0.164437904603676,0,0.579606171470105,0.593146252648242,0.802622484269139,1.04535523804977,0.566546713487831,1.14966148080576,0.34362744548263,1.01207876807801,0.637130828648193,0,0,0.903450714466637,0.639933055772092,2.49861453104692,0.473554504088034,1.64225599384209,1.81446068902259,1.06976078313403,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,2.63560834872127,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.310983165046111,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0.482022059766964,0.661763836394364,1.30727666455444,0,0.134831308160164,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.882926198829301,1.35287282397425,0,0.219500570817251,0,0.100528972411631,0.277765335475589,0,0,0,0,0.234817388471643,0.144366447761074,0.462985512576611,0,0,0,0,0.702012795417713,0,0.93733833986777,0.503946384596579,0.567100388969546,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0.784596007954691,1.18218456121156,0.862510299438069,1.02674429023799,0.508189248444927,0,0,0.167516265334349,0,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.213455115606889,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.241718899183244,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0,0.638063562472921,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,1.70918513803957,0,0,0.185803175125719,0,0.497992903438899,0.318852545457645,0,0.191505370132367,0,0,0,0.228234679033192,0.156679895773023,2.50634477090067,0.677167111206413,0,0,1.27753871307098,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0.614321404198464,0,0.703347082052564,0,0.16480387422676,0,0,0.552567831062295,0,0.102268682502155,0,0,0.0898683511473268,0.537063524026827,0.511572370226872,0,0,0,0,0.927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0.482385754501632,0,0.331737779793674,0.591095237907095,0.658156191461918,0.10893846351899,0.139423744278603,0,0,0.46112780877612,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,2.04386596391473,0,0.166211681900156,0,0.784250137270958,0.167821586975843,0,0.158936578980379,0,0.489698424477443,0,0,0,0.0884575645033392,0.611030144933625,0.889563386041866,0.370691816839509,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0.60129367765797,0,0,0,0,0,0.284609546029793,0.138674673013139,0.347119476670262,0.293977192243133,0.435296032902013,0.17472666824203,0,0.387025325156341,0.146178634172371,0.246346371159628,0,0.0882561266915003,0,0,0,0.823040347426423,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0.288109595976299,0.124252535565433,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0.86661500537946,0.494495150286999,0.202210631562555,0.295282444544246,0.0846733320657845,1.59045937961861,0.544813624446302,0,0.275078873194468,0,0.899895566206002,1.5476039091159,0.485996453264197,0,0.709251365692784,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.904980694530854,0.26446520348538,0,0,0,0,0,0,0,0.487170393523584,0.638341257770182,0,0,0,0,0,1.77213635993397,0.732157589411779,0.876336514945499,2.86704597845036,1.10929051536852,0.620964029413834,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0.228840068396924,0.151230923763239,0.310874401165561,0,0,0.899606224327209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,1.50109113962448,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0.584580926518165,0,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.371807292777007,0,0,0.157723490002507,0,0,0,0.513833800771676,1.41696576325585,0.319267718114302,0.615349092722265,0.252071696221718,0.345786262321089,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0.810451015420736,0,0.620060389503552,0.634158101939068,0,0,0,0,0.127762427639595,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0.576169937778896,0,1.69924332442079,0.394636641377094,0,0.778619813244484,0,0.785577949580009,0,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0.207216164163037,0.85359238546975,0,0,0,0,0,0.4582137370881,0,0,0,0.294450700845729,0.975343399858155,0,0,0,0,0,0,0,0.11294608203896,0,0.452888530700021,0.540219106755613,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0.0939839179798536,0.322289439867886,0.599646935549574,0.357107877211315,0,0.401206833445841,0,0,0,0,0.407948941145488,0.436350690340377,0,0,0,0.432626562123789,0.126166424835079,0.327796715891087,0,0.203977659483963,0,0.275684698604535,0,0.227336094654718,0.267964130156178,1.65833887891756,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.372448285775147,0,0,0,0.217716747896961,0,0,0,0,0.162806537221949,0.106727345877715,0,0,0,0.122241444182866,0,0.665756774185513,0,0.320568492303233 | ||
|short_description=p10@MUDENG | |short_description=p10@MUDENG | ||
}} | }} |
Latest revision as of 18:13, 24 September 2015
Short description: | p10@MUDENG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MUDENG_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000554213_5end |
EntrezGene: | MUDENG |
HGNC: | 20192 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brainstem | 3.27e-10 | 6 |
medulla oblongata | 1.73e-09 | 3 |
myelencephalon | 1.73e-09 | 3 |
future myelencephalon | 1.73e-09 | 3 |