FFCP PHASE1:Hg19::chr1:146643708..146643719,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5565 | |EntrezGene=5565 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9379 | |HGNC=9379 | ||
|TSSclassifier=strong | |||
|UniProt=O43741 | |UniProt=O43741 | ||
|association_with_transcript=3bp_to_AJ224538_5end | |association_with_transcript=3bp_to_AJ224538_5end | ||
|cluster_id=chr1:146643708..146643719,- | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_7_at_PRKAB2_5end | |description=CAGE_peak_7_at_PRKAB2_5end | ||
|id=chr1:146643708..146643719,- | |id=chr1:146643708..146643719,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;4.76e-13;1!CL:0000182;2.32e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.01e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.94e-17;11!UBERON:0009497;1.19e-14;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.69e-07;2!DOID:1909;3.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.91e-07,2;DOID:114,3.93e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.20e-10;19!UBERON:0006925;4.20e-10;19!UBERON:0003688;9.62e-09;6!UBERON:0002358;9.62e-09;6!UBERON:0003684;9.62e-09;6!UBERON:0001178;9.62e-09;6!UBERON:0002423;1.00e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.73e-10,19;UBERON:0006925,3.73e-10,19;UBERON:0008836,3.73e-10,19;UBERON:0008835,8.48e-09,22;UBERON:0003894,8.48e-09,22;UBERON:0003688,1.59e-08,6;UBERON:0002358,1.59e-08,6;UBERON:0003684,1.59e-08,6;UBERON:0001178,1.59e-08,6;UBERON:0009854,2.01e-08,23;UBERON:0007499,9.17e-08,25;UBERON:0009497,9.17e-08,25;UBERON:0000015,9.17e-08,25;UBERON:0002423,9.17e-08,25;UBERON:0006235,9.17e-08,25;UBERON:0004161,9.17e-08,25;UBERON:0009856,1.80e-07,26 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0.323292113637624,0,0.201504196455281,0,0.386521706326594,0,0.286804595389004,0,0.265059536642971,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0.503946384596579,0.283550194484773,0.179117045405697,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.256278298511402,1.02341449813341,0,0,0,0,0,0,0.232420756919918,0,0,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0.286822704408103,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,1.41215701165169,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0.251932747854276,0.715880777515084,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.278847488557207,0,0,0,0.448788222048861,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,1.32686346755009,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.60129367765797,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0.347119476670262,0,0.174118413160805,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0.857974989309823,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,1.28767814440971,0.223171457441873,0.134366944973453,0,0,1.57566364614447,1.07140615895516,1.3480708770837,0.196854963029498,0,0,0,0,0.275078873194468,0,0.674921674654501,0,0,0,0,0,0,0,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0,0,0,0.58620893471233,1.32506888912221,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0,0,0,1.27668251554036,0,0,0,0.327872630709804,0.785270481251171,0,0,0.1251909307065,0,0,0.124192805882767,0.138348634936231,0,1.36484205787483,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,1.26184898228651,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0.19998739585493,0,0,0,0.184105950251841,0.139879507719444,0,0.255788742607303,0.215649622793364,0.314531883711793,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0.785181748008205,0,0,0,0,0,0.397832444232549,0,0.60511520611056,0,0.261906694481422,0,0,0.135075169236789,0,0,0,0,0,0,4.57265235335014,0.255524855279191,0,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,0,0,0.131545547125698,0,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0.51215543128185,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0.196300467230486,0.243835849964539,0,0.102662806856247,0,0,0.467878926924211,0,0,0.5647304101948,0.329821550236287,0.301925687133347,0.617393264863557,0.437119121007915,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0.128915775947154,0.0999411559249289,0.357107877211315,2.47026410200984,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0.432626562123789,0.126166424835079,0.218531143927391,0.253397002022874,0.61193297845189,1.3360870263278,0.7351591962787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| |phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0.323292113637624,0,0.201504196455281,0,0.386521706326594,0,0.286804595389004,0,0.265059536642971,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0.503946384596579,0.283550194484773,0.179117045405697,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.256278298511402,1.02341449813341,0,0,0,0,0,0,0.232420756919918,0,0,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0.286822704408103,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,1.41215701165169,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0.251932747854276,0.715880777515084,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.278847488557207,0,0,0,0.448788222048861,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,1.32686346755009,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.60129367765797,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0.347119476670262,0,0.174118413160805,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0.857974989309823,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0,0,0,1.28767814440971,0.223171457441873,0.134366944973453,0,0,1.57566364614447,1.07140615895516,1.3480708770837,0.196854963029498,0,0,0,0,0.275078873194468,0,0.674921674654501,0,0,0,0,0,0,0,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0,0,0,0.58620893471233,1.32506888912221,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0,0,0,0,1.27668251554036,0,0,0,0.327872630709804,0.785270481251171,0,0,0.1251909307065,0,0,0.124192805882767,0.138348634936231,0,1.36484205787483,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0.336749488765919,1.26184898228651,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0.19998739585493,0,0,0,0.184105950251841,0.139879507719444,0,0.255788742607303,0.215649622793364,0.314531883711793,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0.785181748008205,0,0,0,0,0,0.397832444232549,0,0.60511520611056,0,0.261906694481422,0,0,0.135075169236789,0,0,0,0,0,0,4.57265235335014,0.255524855279191,0,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,0,0,0.131545547125698,0,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0.51215543128185,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0.196300467230486,0.243835849964539,0,0.102662806856247,0,0,0.467878926924211,0,0,0.5647304101948,0.329821550236287,0.301925687133347,0.617393264863557,0.437119121007915,0,0,0.235676547101626,0,0,0,0.169927114687817,0,0.128915775947154,0.0999411559249289,0.357107877211315,2.47026410200984,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0.432626562123789,0.126166424835079,0.218531143927391,0.253397002022874,0.61193297845189,1.3360870263278,0.7351591962787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| ||
|short_description=p7@PRKAB2 | |short_description=p7@PRKAB2 | ||
}} | }} |
Latest revision as of 19:08, 16 September 2015
Short description: | p7@PRKAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRKAB2_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | 3bp_to_AJ224538_5end |
EntrezGene: | PRKAB2 |
HGNC: | 9379 |
UniProt: | O43741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.01e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.73e-10 | 19 |
digestive gland | 3.73e-10 | 19 |
liver bud | 3.73e-10 | 19 |
hepatic diverticulum | 8.48e-09 | 22 |
liver primordium | 8.48e-09 | 22 |
omentum | 1.59e-08 | 6 |
peritoneum | 1.59e-08 | 6 |
abdominal cavity | 1.59e-08 | 6 |
visceral peritoneum | 1.59e-08 | 6 |
digestive tract diverticulum | 2.01e-08 | 23 |
epithelial sac | 9.17e-08 | 25 |
epithelium of foregut-midgut junction | 9.17e-08 | 25 |
anatomical boundary | 9.17e-08 | 25 |
hepatobiliary system | 9.17e-08 | 25 |
foregut-midgut junction | 9.17e-08 | 25 |
septum transversum | 9.17e-08 | 25 |
sac | 1.80e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.91e-07 | 2 |
heart disease | 3.93e-07 | 2 |