FFCP PHASE1:Hg19::chr14:94845825..94845853,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt=P01009 | |UniProt=P01009 | ||
|association_with_transcript=-6bp_to_V00496_5end | |association_with_transcript=-6bp_to_V00496_5end | ||
|cluster_id=chr14:94845825..94845853,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_19_at_SERPINA1_5end | |description=CAGE_peak_19_at_SERPINA1_5end | ||
|id=chr14:94845825..94845853,- | |id=chr14:94845825..94845853,- | ||
|ontology_enrichment_celltype=CL:0002057!8.08e-54!42;CL:0000860!2.25e-49!45;CL:0002194!6.36e-39!63;CL:0000576!6.36e-39!63;CL:0000040!6.36e-39!63;CL:0000559!6.36e-39!63;CL:0002009!2.49e-37!65;CL:0000766!5.14e-36!76;CL:0000839!9.51e-34!70;CL:0000557!4.30e-33!71;CL:0000763!3.42e-21!112;CL:0000049!3.42e-21!112;CL:0002087!5.75e-20!119;CL:0000738!3.74e-18!140;CL:0002031!1.36e-15!124;CL:0002393!3.38e-15!9;CL:0002397!3.38e-15!9;CL:0000037!6.16e-13!172;CL:0000566!6.16e-13!172;CL:0002032!9.45e-12!165;CL:0000837!9.45e-12!165;CL:0000988!1.71e-11!182;CL:0000181!1.30e-07!12;CL:0000417!1.30e-07!12;CL:0000668!1.30e-07!12;CL:0000414!1.30e-07!12;CL:0000412!1.30e-07!12;CL:0000182!1.30e-07!12;CL:0000775!6.23e-07!3 | |ontology_enrichment_celltype=CL:0002057!8.08e-54!42;CL:0000860!2.25e-49!45;CL:0002194!6.36e-39!63;CL:0000576!6.36e-39!63;CL:0000040!6.36e-39!63;CL:0000559!6.36e-39!63;CL:0002009!2.49e-37!65;CL:0000766!5.14e-36!76;CL:0000839!9.51e-34!70;CL:0000557!4.30e-33!71;CL:0000763!3.42e-21!112;CL:0000049!3.42e-21!112;CL:0002087!5.75e-20!119;CL:0000738!3.74e-18!140;CL:0002031!1.36e-15!124;CL:0002393!3.38e-15!9;CL:0002397!3.38e-15!9;CL:0000037!6.16e-13!172;CL:0000566!6.16e-13!172;CL:0002032!9.45e-12!165;CL:0000837!9.45e-12!165;CL:0000988!1.71e-11!182;CL:0000181!1.30e-07!12;CL:0000417!1.30e-07!12;CL:0000668!1.30e-07!12;CL:0000414!1.30e-07!12;CL:0000412!1.30e-07!12;CL:0000182!1.30e-07!12;CL:0000775!6.23e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.47e-23;33!CL:0002057;7.47e-23;33!CL:0000576;1.21e-17;48!CL:0000473;5.00e-16;39!CL:0000234;5.00e-16;39!CL:0000775;1.15e-15;3!CL:0000182;2.37e-15;12!CL:0000766;5.48e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.58e-29,42;CL:0002057,3.58e-29,42;CL:0000473,4.74e-25,48;CL:0000234,4.74e-25,48;CL:0000766,7.17e-22,72;CL:0002194,2.77e-19,59;CL:0000576,2.77e-19,59;CL:0000040,2.77e-19,59;CL:0000559,2.77e-19,59;CL:0002009,1.53e-18,61;CL:0000839,7.07e-17,66;CL:0000557,1.42e-16,67;CL:0000775,1.16e-15,3;CL:0000182,2.35e-15,12;CL:0000763,3.58e-13,108;CL:0000049,3.58e-13,108;CL:0000738,4.34e-12,136;CL:0002087,1.10e-10,115;CL:0000037,6.70e-09,168;CL:0002031,7.08e-09,120;CL:0002032,1.86e-08,161;CL:0000837,1.86e-08,161;CL:0000988,3.25e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.37e-20;42!UBERON:0004161;8.28e-12;11!UBERON:0009497;6.07e-10;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.28e-33!102;UBERON:0003061!7.28e-33!102;UBERON:0002405!2.52e-30!115;UBERON:0002193!4.81e-30!112;UBERON:0002371!6.14e-28!80;UBERON:0001474!4.13e-25!86;UBERON:0004765!6.90e-22!101;UBERON:0001434!6.90e-22!101;UBERON:0003081!7.63e-10!216;UBERON:0002204!8.22e-10!167;UBERON:0008835!8.76e-09!22;UBERON:0003894!8.76e-09!22;UBERON:0009497!1.04e-08!25;UBERON:0000015!1.04e-08!25;UBERON:0002423!1.04e-08!25;UBERON:0006235!1.04e-08!25;UBERON:0004161!1.04e-08!25;UBERON:0009854!2.80e-08!23;UBERON:0000178!8.20e-08!15;UBERON:0000179!8.20e-08!15;UBERON:0000463!8.20e-08!15;UBERON:0007499!2.14e-07!25;UBERON:0002107!2.93e-07!19;UBERON:0006925!2.93e-07!19;UBERON:0008836!2.93e-07!19;UBERON:0000926!4.01e-07!448;UBERON:0004120!4.01e-07!448;UBERON:0006603!4.01e-07!448;UBERON:0009856!5.25e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.30e-16;19!UBERON:0006925;1.30e-16;19!UBERON:0002423;2.65e-12;25!UBERON:0002365;2.46e-09;31!UBERON:0002330;2.46e-09;31!UBERON:0002368;2.97e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.30e-16,19;UBERON:0006925,1.30e-16,19;UBERON:0008836,1.30e-16,19;UBERON:0002371,3.35e-14,76;UBERON:0008835,3.63e-14,22;UBERON:0003894,3.63e-14,22;UBERON:0009854,1.72e-13,23;UBERON:0002390,3.26e-13,98;UBERON:0003061,3.26e-13,98;UBERON:0001474,6.58e-13,82;UBERON:0007499,2.64e-12,25;UBERON:0009497,2.64e-12,25;UBERON:0000015,2.64e-12,25;UBERON:0002423,2.64e-12,25;UBERON:0006235,2.64e-12,25;UBERON:0004161,2.64e-12,25;UBERON:0009856,8.82e-12,26;UBERON:0002193,1.27e-11,108;UBERON:0004765,1.88e-11,90;UBERON:0002405,5.70e-11,93;UBERON:0001434,5.84e-10,100;UBERON:0002365,1.15e-09,31;UBERON:0002330,1.15e-09,31;UBERON:0002368,2.07e-08,35 | |||
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| ||
|short_description=p19@SERPINA1 | |short_description=p19@SERPINA1 | ||
}} | }} |
Latest revision as of 17:48, 16 September 2015
Short description: | p19@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SERPINA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -6bp_to_V00496_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | P01009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.58e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.58e-29 | 42 |
defensive cell | 4.74e-25 | 48 |
phagocyte | 4.74e-25 | 48 |
myeloid leukocyte | 7.17e-22 | 72 |
monopoietic cell | 2.77e-19 | 59 |
monocyte | 2.77e-19 | 59 |
monoblast | 2.77e-19 | 59 |
promonocyte | 2.77e-19 | 59 |
macrophage dendritic cell progenitor | 1.53e-18 | 61 |
myeloid lineage restricted progenitor cell | 7.07e-17 | 66 |
granulocyte monocyte progenitor cell | 1.42e-16 | 67 |
neutrophil | 1.16e-15 | 3 |
hepatocyte | 2.35e-15 | 12 |
myeloid cell | 3.58e-13 | 108 |
common myeloid progenitor | 3.58e-13 | 108 |
leukocyte | 4.34e-12 | 136 |
nongranular leukocyte | 1.10e-10 | 115 |
hematopoietic stem cell | 6.70e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 7.08e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.86e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-08 | 161 |
hematopoietic cell | 3.25e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
liver | 1.30e-16 | 19 |
digestive gland | 1.30e-16 | 19 |
liver bud | 1.30e-16 | 19 |
bone marrow | 3.35e-14 | 76 |
hepatic diverticulum | 3.63e-14 | 22 |
liver primordium | 3.63e-14 | 22 |
digestive tract diverticulum | 1.72e-13 | 23 |
hematopoietic system | 3.26e-13 | 98 |
blood island | 3.26e-13 | 98 |
bone element | 6.58e-13 | 82 |
epithelial sac | 2.64e-12 | 25 |
epithelium of foregut-midgut junction | 2.64e-12 | 25 |
anatomical boundary | 2.64e-12 | 25 |
hepatobiliary system | 2.64e-12 | 25 |
foregut-midgut junction | 2.64e-12 | 25 |
septum transversum | 2.64e-12 | 25 |
sac | 8.82e-12 | 26 |
hemolymphoid system | 1.27e-11 | 108 |
skeletal element | 1.88e-11 | 90 |
immune system | 5.70e-11 | 93 |
skeletal system | 5.84e-10 | 100 |
exocrine gland | 1.15e-09 | 31 |
exocrine system | 1.15e-09 | 31 |
endocrine gland | 2.07e-08 | 35 |