FFCP PHASE1:Hg19::chr15:91072855..91072876,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64784 | |EntrezGene=64784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26148 | |HGNC=26148 | ||
|TSSclassifier=strong | |||
|UniProt=F8W842 | |UniProt=F8W842 | ||
|association_with_transcript=-280bp_to_ENST00000420329,ENST00000437186_5end | |association_with_transcript=-280bp_to_ENST00000420329,ENST00000437186_5end | ||
|cluster_id=chr15:91072855..91072876,+ | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_8_at_CRTC3_5end | |description=CAGE_peak_8_at_CRTC3_5end | ||
|id=chr15:91072855..91072876,+ | |id=chr15:91072855..91072876,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.78e-17;3!CL:0000039;2.78e-08;7!CL:0000586;2.78e-08;7!CL:0000047;1.64e-07;2!CL:0000123;1.64e-07;2!CL:0000242;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.11e-17,3;CL:0000039,2.78e-08,7;CL:0000586,2.78e-08,7;CL:0000242,1.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.72e-14;1!UBERON:0005425;9.72e-14;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;3.98e-14;1!DOID:10165;3.98e-14;1!DOID:1798;3.98e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.98e-14,1;DOID:10165,3.98e-14,1;DOID:1798,3.98e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.25e-19!82;UBERON:0005743!1.27e-18!86;UBERON:0000073!2.22e-18!94;UBERON:0001016!2.22e-18!94;UBERON:0000955!3.39e-18!69;UBERON:0006238!3.39e-18!69;UBERON:0002616!9.93e-18!59;UBERON:0001049!1.17e-17!57;UBERON:0005068!1.17e-17!57;UBERON:0006241!1.17e-17!57;UBERON:0007135!1.17e-17!57;UBERON:0002780!6.72e-16!41;UBERON:0001890!6.72e-16!41;UBERON:0006240!6.72e-16!41;UBERON:0003080!2.70e-15!42;UBERON:0001869!7.47e-15!32;UBERON:0002346!9.17e-15!90;UBERON:0001893!1.11e-14!34;UBERON:0002791!7.05e-14!33;UBERON:0002020!1.91e-13!34;UBERON:0003528!1.91e-13!34;UBERON:0007023!2.39e-13!115;UBERON:0003075!1.38e-12!86;UBERON:0007284!1.38e-12!86;UBERON:0001950!9.10e-12!20;UBERON:0000924!1.37e-11!173;UBERON:0006601!1.37e-11!173;UBERON:0003056!1.08e-10!61;UBERON:0002619!2.83e-10!22;UBERON:0000153!5.04e-10!129;UBERON:0007811!5.04e-10!129;UBERON:0004121!5.45e-10!169;UBERON:0000033!1.39e-09!123;UBERON:0000956!1.57e-09!25;UBERON:0000203!1.57e-09!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.78e-17;3!UBERON:0000920;1.78e-17;3!UBERON:0000941;9.72e-14;1!UBERON:0001785;9.72e-14;1!UBERON:0002464;9.72e-14;1!UBERON:0004904;9.72e-14;1!UBERON:0001021;9.72e-14;1!UBERON:0001905;1.64e-07;2!UBERON:0003714;1.64e-07;2!UBERON:0005162;1.64e-07;2!UBERON:0000122;1.64e-07;2!UBERON:0002757;1.64e-07;2!UBERON:0010134;1.64e-07;2!UBERON:0005408;1.64e-07;2!UBERON:0001899;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.11e-17,3;UBERON:0003124,2.07e-16,7;UBERON:0000941,9.73e-14,1;UBERON:0001785,9.73e-14,1;UBERON:0002464,9.73e-14,1;UBERON:0004904,9.73e-14,1;UBERON:0001021,9.73e-14,1;UBERON:0003902,9.73e-14,1;UBERON:0005425,9.73e-14,1;UBERON:0005631,1.70e-08,14;UBERON:0000158,1.70e-08,14;UBERON:0001016,8.39e-08,89;UBERON:0003714,1.64e-07,2;UBERON:0005162,1.64e-07,2;UBERON:0000122,1.64e-07,2;UBERON:0001905,2.40e-07,2;UBERON:0002757,2.40e-07,2;UBERON:0010134,2.40e-07,2;UBERON:0005408,2.40e-07,2;UBERON:0001899,2.40e-07,2;UBERON:0001017,9.97e-07,81 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0.552700035571697,0,0.444859689486181,0.802622484269139,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0,0.474541238222193,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,1.30139853857622,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0.281338832821026,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0.295547618953547,0.219385397153973,0.544692317594951,0.41827123283581,0.0769502585037971,0,7.83917274919404,5.20594337576678,0.325942115766024,1.5950057986596,0.0915975934018623,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0.468528891450678,0,0.19566461893209,0,0,0,1.53036380815245,0.126373159256976,0.150323419414493,0.414752765588989,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0,0.677294319023596,0.584714536689484,0.246346371159628,0,0.441280633457501,0,0,0,0.316553979779393,0.391102765469606,0,0.426905989478705,0,0.288180834308212,0.229073192331831,0.171594997861965,0,0,0.942776138467182,0.135904206073614,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.2249738915515,0,0.364497339948148,0,0.0788057072991982,0.262272940674991,0.105600336519406,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.1251909307065,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,1.87333962322753,0.28984205722165,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0.255788742607303,0,0.314531883711793,0,0.169732529954025,0.850299680406731,0.123935764259002,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0.205116364240755,1.51243017733031,0.414943514785307,0.322951291263702,1.42769420259154,0,0.11796972334774,0,0.115525666150338,0,0,0,0.526472298444801,0,0,2.3571602503328,0,0.147856086217045,0.337687923091973,0,0.413373593002368,0.19024743058172,1.09394961803644,0,0,0.351742488719241,0,0,1.00885116665647,0,0.227662191351298,1.1531308121143,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0.470958557103084,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.271965960763659,1.30905207102113,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.303114792872958,0,0,0.20686599172379,0,0,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.404234377916439,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0.320568492303233 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0.552700035571697,0,0.444859689486181,0.802622484269139,0,0,0.383220493601921,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0,0.474541238222193,0.269662616320329,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,1.30139853857622,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0,0,0.281338832821026,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0.295547618953547,0.219385397153973,0.544692317594951,0.41827123283581,0.0769502585037971,0,7.83917274919404,5.20594337576678,0.325942115766024,1.5950057986596,0.0915975934018623,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0.468528891450678,0,0.19566461893209,0,0,0,1.53036380815245,0.126373159256976,0.150323419414493,0.414752765588989,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0,0.677294319023596,0.584714536689484,0.246346371159628,0,0.441280633457501,0,0,0,0.316553979779393,0.391102765469606,0,0.426905989478705,0,0.288180834308212,0.229073192331831,0.171594997861965,0,0,0.942776138467182,0.135904206073614,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0.2249738915515,0,0.364497339948148,0,0.0788057072991982,0.262272940674991,0.105600336519406,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.1251909307065,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,1.87333962322753,0.28984205722165,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0.255788742607303,0,0.314531883711793,0,0.169732529954025,0.850299680406731,0.123935764259002,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0.205116364240755,1.51243017733031,0.414943514785307,0.322951291263702,1.42769420259154,0,0.11796972334774,0,0.115525666150338,0,0,0,0.526472298444801,0,0,2.3571602503328,0,0.147856086217045,0.337687923091973,0,0.413373593002368,0.19024743058172,1.09394961803644,0,0,0.351742488719241,0,0,1.00885116665647,0,0.227662191351298,1.1531308121143,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0.470958557103084,0.471346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.271965960763659,1.30905207102113,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.303114792872958,0,0,0.20686599172379,0,0,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.404234377916439,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0.320568492303233 | ||
|short_description=p8@CRTC3 | |short_description=p8@CRTC3 | ||
}} | }} |
Latest revision as of 19:58, 19 September 2015
Short description: | p8@CRTC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CRTC3_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | -280bp_to_ENST00000420329, ENST00000437186_5end |
EntrezGene: | CRTC3 |
HGNC: | 26148 |
UniProt: | F8W842 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.11e-17 | 3 |
germ line cell | 2.78e-08 | 7 |
germ cell | 2.78e-08 | 7 |
Merkel cell | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.11e-17 | 3 |
chorion | 2.07e-16 | 7 |
cranial nerve II | 9.73e-14 | 1 |
cranial nerve | 9.73e-14 | 1 |
nerve trunk | 9.73e-14 | 1 |
nerve connecting eye with brain | 9.73e-14 | 1 |
nerve | 9.73e-14 | 1 |
retinal neural layer | 9.73e-14 | 1 |
presumptive neural retina | 9.73e-14 | 1 |
extraembryonic membrane | 1.70e-08 | 14 |
membranous layer | 1.70e-08 | 14 |
nervous system | 8.39e-08 | 89 |
neural tissue | 1.64e-07 | 2 |
multi cell component structure | 1.64e-07 | 2 |
neuron projection bundle | 1.64e-07 | 2 |
pineal body | 2.40e-07 | 2 |
regional part of epithalamus | 2.40e-07 | 2 |
secretory circumventricular organ | 2.40e-07 | 2 |
circumventricular organ | 2.40e-07 | 2 |
epithalamus | 2.40e-07 | 2 |
central nervous system | 9.97e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.98e-14 | 1 |
endocrine pancreas cancer | 3.98e-14 | 1 |
pancreatic endocrine carcinoma | 3.98e-14 | 1 |