FFCP PHASE1:Hg19::chr1:53919202..53919204,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:53919202..53919204,- | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_at_chr1:53919202..53919204,- | |description=CAGE_peak_at_chr1:53919202..53919204,- | ||
|id=chr1:53919202..53919204,- | |id=chr1:53919202..53919204,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.92e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.92e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.66e-66;1!UBERON:0003056;4.09e-23;3!UBERON:0004161;2.47e-07;11 | |||
|ontology_enrichment_disease=DOID:178!8.36e-09!1;DOID:326!8.36e-09!1;DOID:3978!8.36e-09!1;DOID:3394!8.36e-09!1;DOID:5844!8.36e-09!1;DOID:8552!9.74e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.61e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.61e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0003135!4.39e-11!11;UBERON:0001896!1.86e-10!3;UBERON:0005290!1.86e-10!3;UBERON:0010096!1.86e-10!3;UBERON:0000941!3.58e-09!1;UBERON:0004904!3.58e-09!1;UBERON:0002464!3.58e-09!1;UBERON:0001021!3.58e-09!1;UBERON:0001785!3.58e-09!1;UBERON:0002134!3.87e-09!1;UBERON:0005208!3.87e-09!1;UBERON:0005946!3.87e-09!1;UBERON:0005965!3.87e-09!1;UBERON:0002078!3.87e-09!1;UBERON:0000473!5.39e-09!8;UBERON:0001301!9.02e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.66e-66;1!UBERON:0001785;4.66e-66;1!UBERON:0002464;4.66e-66;1!UBERON:0004904;4.66e-66;1!UBERON:0001021;4.66e-66;1!UBERON:0003714;7.05e-34;2!UBERON:0005162;7.05e-34;2!UBERON:0000122;7.05e-34;2!UBERON:0000010;1.21e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.66e-66,1;UBERON:0001785,4.66e-66,1;UBERON:0002464,4.66e-66,1;UBERON:0004904,4.66e-66,1;UBERON:0001021,4.66e-66,1;UBERON:0003902,4.66e-66,1;UBERON:0005425,4.66e-66,1;UBERON:0003714,7.05e-34,2;UBERON:0005162,7.05e-34,2;UBERON:0000122,7.05e-34,2;UBERON:0001781,1.03e-17,4;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0000010,1.21e-08,8 | |||
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|short_description=p@chr1:53919202..53919204,- | |short_description=p@chr1:53919202..53919204,- | ||
}} | }} |
Latest revision as of 09:10, 28 July 2015
Short description: | p@chr1:53919202..53919204, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:53919202..53919204, - |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.92e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.66e-66 | 1 |
cranial nerve | 4.66e-66 | 1 |
nerve trunk | 4.66e-66 | 1 |
nerve connecting eye with brain | 4.66e-66 | 1 |
nerve | 4.66e-66 | 1 |
retinal neural layer | 4.66e-66 | 1 |
presumptive neural retina | 4.66e-66 | 1 |
neural tissue | 7.05e-34 | 2 |
multi cell component structure | 7.05e-34 | 2 |
neuron projection bundle | 7.05e-34 | 2 |
layer of retina | 1.03e-17 | 4 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
peripheral nervous system | 1.21e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.61e-34 | 2 |