FFCP PHASE1:Hg19::chr2:11696495..11696507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9687 | |EntrezGene=9687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24885 | |HGNC=24885 | ||
|TSSclassifier=strong | |||
|UniProt=Q4ZG55 | |UniProt=Q4ZG55 | ||
|association_with_transcript=16bp_to_ENST00000234142_5end | |association_with_transcript=16bp_to_ENST00000234142_5end | ||
|cluster_id=chr2:11696495..11696507,+ | |||
|coexpression_cluster_id=C337 | |||
|description=CAGE_peak_16_at_GREB1_5end | |description=CAGE_peak_16_at_GREB1_5end | ||
|id=chr2:11696495..11696507,+ | |id=chr2:11696495..11696507,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!1.71e-08!4;DOID:1612!1.71e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.82e-50;4!DOID:1612;5.82e-50;4!DOID:299;5.60e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.60e-50,4;DOID:1612,6.60e-50,4;DOID:299,5.71e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-18!115;UBERON:0000007!6.94e-16!2;UBERON:0001049!2.71e-15!57;UBERON:0005068!2.71e-15!57;UBERON:0006241!2.71e-15!57;UBERON:0007135!2.71e-15!57;UBERON:0002346!1.43e-14!90;UBERON:0002616!2.91e-12!59;UBERON:0003076!1.29e-11!15;UBERON:0003057!1.29e-11!15;UBERON:0003075!3.07e-11!86;UBERON:0007284!3.07e-11!86;UBERON:0005743!4.38e-11!86;UBERON:0001896!2.27e-10!3;UBERON:0005290!2.27e-10!3;UBERON:0010096!2.27e-10!3;UBERON:0000955!4.52e-10!69;UBERON:0006238!4.52e-10!69;UBERON:0001017!6.72e-10!82;UBERON:0000073!7.75e-10!94;UBERON:0001016!7.75e-10!94;UBERON:0004733!1.40e-09!12;UBERON:0002028!1.40e-09!12;UBERON:0007277!1.40e-09!12;UBERON:0006834!6.50e-09!1;UBERON:0004732!7.46e-09!13;UBERON:0002426!8.15e-09!1;UBERON:0003831!8.15e-09!1;UBERON:0003898!8.15e-09!1;UBERON:0004830!8.15e-09!1;UBERON:0001774!8.15e-09!1;UBERON:0003830!8.15e-09!1;UBERON:0005175!8.15e-09!1;UBERON:0003897!8.15e-09!1;UBERON:0001103!8.15e-09!1;UBERON:0010084!8.15e-09!1;UBERON:0001882!1.27e-08!1;UBERON:0005403!1.27e-08!1;UBERON:0002298!1.70e-08!8;UBERON:0001301!1.98e-08!1;UBERON:0003296!2.21e-08!4;UBERON:0010133!2.21e-08!4;UBERON:0007190!3.06e-08!1;UBERON:0002336!3.28e-08!1;UBERON:0001018!3.28e-08!1;UBERON:0002473!3.28e-08!1;UBERON:0005340!3.28e-08!1;UBERON:0002316!3.28e-08!1;UBERON:0003544!3.28e-08!1;UBERON:0001020!3.28e-08!1;UBERON:0005970!3.28e-08!1;UBERON:0002437!3.28e-08!1;UBERON:0002022!4.07e-08!1;UBERON:0002780!1.91e-07!41;UBERON:0001890!1.91e-07!41;UBERON:0006240!1.91e-07!41;UBERON:0003080!2.97e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;5.12e-50;1!UBERON:0000310;8.98e-21;10!UBERON:0001443;5.38e-19;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.99e-50,1;UBERON:0000310,9.44e-21,10;UBERON:0001443,5.63e-19,11 | |||
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|short_description=p16@GREB1 | |short_description=p16@GREB1 | ||
}} | }} |
Latest revision as of 15:14, 16 September 2015
Short description: | p16@GREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_GREB1_5end |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | 16bp_to_ENST00000234142_5end |
EntrezGene: | GREB1 |
HGNC: | 24885 |
UniProt: | Q4ZG55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 3.99e-50 | 1 |
breast | 9.44e-21 | 10 |
chest | 5.63e-19 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.60e-50 | 4 |
breast cancer | 6.60e-50 | 4 |
adenocarcinoma | 5.71e-09 | 25 |