FFCP PHASE1:Hg19::chr17:78010428..78010465,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55036 | |EntrezGene=55036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26090 | |HGNC=26090 | ||
|TSSclassifier=strong | |||
|UniProt=Q4G0X9 | |UniProt=Q4G0X9 | ||
|association_with_transcript=0bp_to_ENST00000269318,ENST00000374876,ENST00000374877,ENST00000397545,NM_001243342,NM_017950,uc010dht.2,uc010wub.1_5end | |association_with_transcript=0bp_to_ENST00000269318,ENST00000374876,ENST00000374877,ENST00000397545,NM_001243342,NM_017950,uc010dht.2,uc010wub.1_5end | ||
|cluster_id=chr17:78010428..78010465,+ | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_CCDC40_5end | |description=CAGE_peak_1_at_CCDC40_5end | ||
|id=chr17:78010428..78010465,+ | |id=chr17:78010428..78010465,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.96e-09;29!UBERON:0006601;4.68e-09;82 | |||
|ontology_enrichment_disease=DOID:0050687!4.09e-16!143;DOID:305!2.21e-13!106 | |ontology_enrichment_disease=DOID:0050687!4.09e-16!143;DOID:305!2.21e-13!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,5.58e-16,143;DOID:305,1.93e-13,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.65e-23!94;UBERON:0001016!1.65e-23!94;UBERON:0001017!1.28e-22!82;UBERON:0005743!2.10e-22!86;UBERON:0001049!1.53e-20!57;UBERON:0005068!1.53e-20!57;UBERON:0006241!1.53e-20!57;UBERON:0007135!1.53e-20!57;UBERON:0003075!2.78e-19!86;UBERON:0007284!2.78e-19!86;UBERON:0000955!4.27e-19!69;UBERON:0006238!4.27e-19!69;UBERON:0002346!1.13e-18!90;UBERON:0002616!1.13e-17!59;UBERON:0007023!1.46e-16!115;UBERON:0003080!1.37e-15!42;UBERON:0002780!2.14e-15!41;UBERON:0001890!2.14e-15!41;UBERON:0006240!2.14e-15!41;UBERON:0004121!3.68e-15!169;UBERON:0000924!5.58e-15!173;UBERON:0006601!5.58e-15!173;UBERON:0003056!3.70e-12!61;UBERON:0002020!7.08e-12!34;UBERON:0003528!7.08e-12!34;UBERON:0001893!1.70e-11!34;UBERON:0000481!1.83e-11!347;UBERON:0000025!1.98e-11!194;UBERON:0002791!2.52e-11!33;UBERON:0000033!3.63e-11!123;UBERON:0000062!5.27e-11!511;UBERON:0000153!1.26e-10!129;UBERON:0007811!1.26e-10!129;UBERON:0001869!1.49e-10!32;UBERON:0000477!1.20e-09!286;UBERON:0000483!1.89e-09!309;UBERON:0004111!2.40e-09!241;UBERON:0000468!2.41e-09!659;UBERON:0000475!3.13e-09!365;UBERON:0000922!4.32e-09!612;UBERON:0000119!4.45e-09!312;UBERON:0000467!1.45e-08!625;UBERON:0000480!2.33e-08!626;UBERON:0002619!1.08e-07!22;UBERON:0000956!1.21e-07!25;UBERON:0000203!1.21e-07!25;UBERON:0002050!1.57e-07!605;UBERON:0005423!1.57e-07!605;UBERON:0000923!2.70e-07!604;UBERON:0005291!2.70e-07!604;UBERON:0006598!2.70e-07!604;UBERON:0002532!2.70e-07!604;UBERON:0000064!4.06e-07!219 | |ontology_enrichment_uberon=UBERON:0000073!1.65e-23!94;UBERON:0001016!1.65e-23!94;UBERON:0001017!1.28e-22!82;UBERON:0005743!2.10e-22!86;UBERON:0001049!1.53e-20!57;UBERON:0005068!1.53e-20!57;UBERON:0006241!1.53e-20!57;UBERON:0007135!1.53e-20!57;UBERON:0003075!2.78e-19!86;UBERON:0007284!2.78e-19!86;UBERON:0000955!4.27e-19!69;UBERON:0006238!4.27e-19!69;UBERON:0002346!1.13e-18!90;UBERON:0002616!1.13e-17!59;UBERON:0007023!1.46e-16!115;UBERON:0003080!1.37e-15!42;UBERON:0002780!2.14e-15!41;UBERON:0001890!2.14e-15!41;UBERON:0006240!2.14e-15!41;UBERON:0004121!3.68e-15!169;UBERON:0000924!5.58e-15!173;UBERON:0006601!5.58e-15!173;UBERON:0003056!3.70e-12!61;UBERON:0002020!7.08e-12!34;UBERON:0003528!7.08e-12!34;UBERON:0001893!1.70e-11!34;UBERON:0000481!1.83e-11!347;UBERON:0000025!1.98e-11!194;UBERON:0002791!2.52e-11!33;UBERON:0000033!3.63e-11!123;UBERON:0000062!5.27e-11!511;UBERON:0000153!1.26e-10!129;UBERON:0007811!1.26e-10!129;UBERON:0001869!1.49e-10!32;UBERON:0000477!1.20e-09!286;UBERON:0000483!1.89e-09!309;UBERON:0004111!2.40e-09!241;UBERON:0000468!2.41e-09!659;UBERON:0000475!3.13e-09!365;UBERON:0000922!4.32e-09!612;UBERON:0000119!4.45e-09!312;UBERON:0000467!1.45e-08!625;UBERON:0000480!2.33e-08!626;UBERON:0002619!1.08e-07!22;UBERON:0000956!1.21e-07!25;UBERON:0000203!1.21e-07!25;UBERON:0002050!1.57e-07!605;UBERON:0005423!1.57e-07!605;UBERON:0000923!2.70e-07!604;UBERON:0005291!2.70e-07!604;UBERON:0006598!2.70e-07!604;UBERON:0002532!2.70e-07!604;UBERON:0000064!4.06e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.15e-12;41!UBERON:0001890;7.15e-12;41!UBERON:0000073;9.76e-12;53!UBERON:0002616;9.76e-12;53!UBERON:0003528;1.85e-10;34!UBERON:0002020;1.85e-10;34!UBERON:0001893;3.51e-10;34!UBERON:0002791;4.26e-10;32!UBERON:0001869;8.76e-10;32!UBERON:0000955;7.01e-09;68!UBERON:0001016;1.80e-08;83!UBERON:0001017;1.95e-08;75!UBERON:0000956;8.49e-08;25!UBERON:0000203;8.49e-08;25!UBERON:0002619;9.28e-08;22 | |||
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| ||
|short_description=p1@CCDC40 | |short_description=p1@CCDC40 | ||
}} | }} |
Latest revision as of 03:19, 18 September 2015
Short description: | p1@CCDC40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC40_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000269318, ENST00000374876, ENST00000374877, ENST00000397545, NM_001243342, NM_017950, uc010dht.2, uc010wub.1_5end |
EntrezGene: | CCDC40 |
HGNC: | 26090 |
UniProt: | Q4G0X9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 5.58e-16 | 143 |
carcinoma | 1.93e-13 | 106 |