FFCP PHASE1:Hg19::chr12:16758304..16758322,-: Difference between revisions
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|id=chr12:16758304..16758322,-
|short_description=p27@LMO3
|description=CAGE_peak_27_at_LMO3_5end
|association_with_transcript=0bp_to_ENST00000320122,NM_001243611_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55885 | |EntrezGene=55885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |HGNC=6643 | ||
|TSSclassifier=strong | |||
|UniProt=Q58A67,Q8TAP4 | |UniProt=Q58A67,Q8TAP4 | ||
|association_with_transcript=0bp_to_ENST00000320122,NM_001243611_5end | |||
|cluster_id=chr12:16758304..16758322,- | |||
|description=CAGE_peak_27_at_LMO3_5end | |||
|id=chr12:16758304..16758322,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.04e-08;3!CL:0000737;7.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.04e-08,3;CL:0000513,1.04e-08,3;CL:0000737,7.70e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.90e-12;2!UBERON:0009847;8.96e-09;3!UBERON:0003353;8.96e-09;3!CL:0000513;1.04e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005383;5.61e-30;3!UBERON:0005382;5.61e-30;3!UBERON:0002022;4.10e-23;1!UBERON:0001874;4.10e-23;1!UBERON:0000369;8.96e-23;4!UBERON:0002435;8.96e-23;4!UBERON:0000204;8.96e-23;4!UBERON:0009663;1.80e-13;7!UBERON:0001255;1.65e-12;2!UBERON:0001556;1.65e-12;2!UBERON:0001873;2.90e-12;2!UBERON:0002420;1.07e-10;9!UBERON:0000125;1.07e-10;9!UBERON:0007245;1.07e-10;9!UBERON:0002308;1.07e-10;9!UBERON:0010009;1.07e-10;9!UBERON:0010011;1.07e-10;9!UBERON:0000454;1.07e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,5.61e-30,3;UBERON:0005382,5.61e-30,3;UBERON:0002022,2.62e-23,1;UBERON:0001874,5.13e-23,1;UBERON:0000369,8.96e-23,4;UBERON:0002435,8.96e-23,4;UBERON:0000204,8.96e-23,4;UBERON:0010082,8.96e-23,4;UBERON:0009663,1.80e-13,7;UBERON:0001255,1.65e-12,2;UBERON:0001556,1.65e-12,2;UBERON:0001873,2.59e-12,2;UBERON:0010122,2.59e-12,2;UBERON:0002420,1.07e-10,9;UBERON:0000125,1.07e-10,9;UBERON:0007245,1.07e-10,9;UBERON:0002308,1.07e-10,9;UBERON:0010009,1.07e-10,9;UBERON:0010011,1.07e-10,9;UBERON:0000454,1.07e-10,9;UBERON:0007023,2.51e-09,114;UBERON:0000162,2.52e-07,14;UBERON:0001353,2.52e-07,14;UBERON:0000163,2.52e-07,14;UBERON:0006866,2.52e-07,14;UBERON:0000164,2.52e-07,14;UBERON:0000931,2.52e-07,14;UBERON:0004122,6.79e-07,15 | |||
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| ||
|short_description=p27@LMO3 | |||
}} | }} |
Latest revision as of 16:16, 17 September 2015
Short description: | p27@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_LMO3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320122, NM_001243611_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | Q58A67Q8TAP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.04e-08 | 3 |
cardiac muscle myoblast | 1.04e-08 | 3 |
striated muscle cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 5.61e-30 | 3 |
dorsal striatum | 5.61e-30 | 3 |
insula | 2.62e-23 | 1 |
putamen | 5.13e-23 | 1 |
corpus striatum | 8.96e-23 | 4 |
striatum | 8.96e-23 | 4 |
ventral part of telencephalon | 8.96e-23 | 4 |
future corpus striatum | 8.96e-23 | 4 |
telencephalic nucleus | 1.80e-13 | 7 |
urinary bladder | 1.65e-12 | 2 |
lower urinary tract | 1.65e-12 | 2 |
caudate nucleus | 2.59e-12 | 2 |
future caudate nucleus | 2.59e-12 | 2 |
basal ganglion | 1.07e-10 | 9 |
neural nucleus | 1.07e-10 | 9 |
nuclear complex of neuraxis | 1.07e-10 | 9 |
nucleus of brain | 1.07e-10 | 9 |
aggregate regional part of brain | 1.07e-10 | 9 |
collection of basal ganglia | 1.07e-10 | 9 |
cerebral subcortex | 1.07e-10 | 9 |
adult organism | 2.51e-09 | 114 |
cloaca | 2.52e-07 | 14 |
anal region | 2.52e-07 | 14 |
embryonic cloaca | 2.52e-07 | 14 |
terminal part of digestive tract | 2.52e-07 | 14 |
primitive urogenital sinus | 2.52e-07 | 14 |
proctodeum | 2.52e-07 | 14 |
genitourinary system | 6.79e-07 | 15 |