FFCP PHASE1:Hg19::chr19:50312039..50312109,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80199 | |EntrezGene=80199 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26219 | |HGNC=26219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000534138_5end | |association_with_transcript=0bp_to_ENST00000534138_5end | ||
|cluster_id=chr19:50312039..50312109,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_FUZ_5end | |description=CAGE_peak_2_at_FUZ_5end | ||
|id=chr19:50312039..50312109,- | |id=chr19:50312039..50312109,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.47e-08;3!CL:0000451;2.48e-07;10!CL:0002322;7.78e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.49e-08,3;CL:0000451,3.29e-07,10;CL:0002322,3.76e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.25e-08;10!UBERON:0005564;3.25e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.97e-30!115;UBERON:0001049!5.97e-19!57;UBERON:0005068!5.97e-19!57;UBERON:0006241!5.97e-19!57;UBERON:0007135!5.97e-19!57;UBERON:0002616!6.50e-16!59;UBERON:0001017!2.16e-15!82;UBERON:0005743!2.28e-15!86;UBERON:0000955!6.94e-14!69;UBERON:0006238!6.94e-14!69;UBERON:0003080!9.19e-14!42;UBERON:0002346!1.12e-13!90;UBERON:0003075!1.82e-13!86;UBERON:0007284!1.82e-13!86;UBERON:0000073!3.00e-13!94;UBERON:0001016!3.00e-13!94;UBERON:0002780!4.26e-13!41;UBERON:0001890!4.26e-13!41;UBERON:0006240!4.26e-13!41;UBERON:0002020!2.04e-12!34;UBERON:0003528!2.04e-12!34;UBERON:0001893!2.61e-12!34;UBERON:0002791!6.80e-12!33;UBERON:0001869!1.45e-11!32;UBERON:0002619!6.33e-10!22;UBERON:0003056!4.43e-09!61;UBERON:0001950!5.65e-09!20;UBERON:0000956!1.62e-08!25;UBERON:0000203!1.62e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.40e-12;22!UBERON:0000922;3.50e-12;49!UBERON:0001950;6.47e-12;20!UBERON:0000956;9.04e-11;25!UBERON:0000203;9.04e-11;25!UBERON:0003528;3.85e-10;34!UBERON:0002020;3.85e-10;34!UBERON:0001869;9.30e-10;32!UBERON:0002791;3.91e-09;32!UBERON:0001893;4.47e-09;34!UBERON:0003135;1.92e-07;11!UBERON:0000473;1.96e-07;8!UBERON:0002780;4.50e-07;41!UBERON:0001890;4.50e-07;41!UBERON:0000955;5.21e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.19e-16,114;UBERON:0002619,3.54e-12,22;UBERON:0000073,8.82e-12,53;UBERON:0002616,8.82e-12,53;UBERON:0003528,1.85e-11,34;UBERON:0002020,1.85e-11,34;UBERON:0001950,2.10e-11,20;UBERON:0001049,7.04e-11,56;UBERON:0005068,7.04e-11,56;UBERON:0006241,7.04e-11,56;UBERON:0007135,7.04e-11,56;UBERON:0002791,1.12e-10,32;UBERON:0001869,1.12e-10,32;UBERON:0000956,2.00e-10,25;UBERON:0000203,2.00e-10,25;UBERON:0002780,4.22e-10,41;UBERON:0001890,4.22e-10,41;UBERON:0003080,4.22e-10,41;UBERON:0006240,4.22e-10,41;UBERON:0000955,5.18e-10,68;UBERON:0006238,5.18e-10,68;UBERON:0001893,7.35e-10,34;UBERON:0001017,1.79e-09,81;UBERON:0003075,4.66e-09,82;UBERON:0007284,4.66e-09,82;UBERON:0002346,2.28e-08,86;UBERON:0003056,3.54e-08,61;UBERON:0001016,5.91e-08,89;UBERON:0000473,1.28e-07,8;UBERON:0003135,1.34e-07,11 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,1.56711376919903,0,0,0.218441372130172,0,0.866364470720326,0.994192127183747,0,0,0,0,0.492484232307152,0.204000691244253,0.626909442956176,0,0.273748850145768,0,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0.369754010166788,0,0,1.46800219667424,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,1.27867425159808,0,0,0,0,0,0,0,0,0.217188844705117,1.21079900526674,0,0,0,0,0,0,0.150176892841506,0,0.855038231223746,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0,3.96513985737078,0.560508562981536,0.526768169550154,0.196709770113833,0,0.205601498999509,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.472674085820339,0,0.263504357079378,49.7720486891308,0,0,0.324547393654683,0,0.132957960518865,24.8030249277556,18.8758320557442,22.6589075811035,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0.516628905878827,0,0.494533858557114,0.910161361938026,2.15585442544872,0,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0,0,0,0.368199594569197,0.323292113637624,0,0.10075209822764,0.169560592310488,0,0,0,1.82960559194393,0.662648841607426,1.51052125730374,1.96956004529204,1.00928340350251,0.72995471815166,0,0,0,0,0.721879481669586,0,0,0,0.220587945464788,0,0,0,0,0,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.463721619900307,0,0,0,0,0.790204397959275,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.264145302039678,0.414656231081544,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0.257207374262142,1.41849132023278,0,0.428933980974443,1.08524321078289,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.335032530668698,0.637938751653163,1.49801404789436,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0,0,0.157702415033935,0.35142424497814,0.300946099727719,0,0,0,0,0.0868836144680828,2.15381273209015,1.02943027143257,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.393373244878272,0,0.0770153371044148,0,1.46139224653261,0.211103257785751,0,0,0,0,0.270946437543853,1.50506932156456,0.254876273045038,0.831076008928724,0.447749509444357,0.877039506583738,1.8300481571743,1.02580050046556,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0.429680979473094,0.870100163485371,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,0,0.272999822815972,0.707027159768564,0,0,0,0,0.578775534266688,0.655894752046633,0,0,0,0,0.196498082026242,0.35667105148125,0.354761064070598,0.422215270595328,0.329294892959902,0,1.39973888097993,0,0,0,0.376575203107117,0,0,0,0,2.02979043692868,0.764637207142375,0.569647187174163,0.952927101831156,1.23408681925858,1.29694662238543,0,0.79312517629427,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0.1605880751037,1.00899853595524,0,0,0.307240764308458,0,0.166849141711909,0,0.835218521685727,0,0,0.33307196799782,0,0,0.586032717087576,0,0,0.284136146806413,1.43246690842614,0.296964680832639,0.614321404198464,0,0.422008249231538,0,0,0.422250816255987,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0.511572370226872,0.493217028184668,0,0,1.93866549219044,0.834912883456661,1.99613798001194,0,0.0874599999961957,2.89999830173917,0,2.2882828526349,1.18193840883968,0.344743373241465,0,0.347249989866585,1.77148277162768,0.844175070377856,3.05163472634166,0.221158519862449,1.18219047581419,1.53569778007781,0,0.139423744278603,1.15425387755696,0,0,0.269272933229316,0.434589487688032,0.638002319463839,0,0,0,0,0.498635045700469,0.225595660617181,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0,0,0,0.741412462787447,0.802577647298789,1.1713222286267,0,0,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0.330991955875499,0.313932918407225,1.19472429772959,0,0,0,0.0979923974143777,0.0870592065804026,3.4945333648406,0.51595809741485,0,0,0,0.0969890164884194,1.235585773681,1.58186518546373,0,0,1.2029051231617,0.391102765469606,0.400794101257669,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0.821432273351958,0,0,0,0.279282401272254,0.687481272035051,0,0.199679000498991,0.429226048136571,0.22317145744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| ||
|short_description=p2@FUZ | |short_description=p2@FUZ | ||
}} | }} |
Latest revision as of 09:01, 19 September 2015
Short description: | p2@FUZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FUZ_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000534138_5end |
EntrezGene: | FUZ |
HGNC: | 26219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.49e-08 | 3 |
dendritic cell | 3.29e-07 | 10 |
embryonic stem cell | 3.76e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.19e-16 | 114 |
regional part of cerebral cortex | 3.54e-12 | 22 |
regional part of nervous system | 8.82e-12 | 53 |
regional part of brain | 8.82e-12 | 53 |
brain grey matter | 1.85e-11 | 34 |
gray matter | 1.85e-11 | 34 |
neocortex | 2.10e-11 | 20 |
neural tube | 7.04e-11 | 56 |
neural rod | 7.04e-11 | 56 |
future spinal cord | 7.04e-11 | 56 |
neural keel | 7.04e-11 | 56 |
regional part of telencephalon | 1.12e-10 | 32 |
cerebral hemisphere | 1.12e-10 | 32 |
cerebral cortex | 2.00e-10 | 25 |
pallium | 2.00e-10 | 25 |
regional part of forebrain | 4.22e-10 | 41 |
forebrain | 4.22e-10 | 41 |
anterior neural tube | 4.22e-10 | 41 |
future forebrain | 4.22e-10 | 41 |
brain | 5.18e-10 | 68 |
future brain | 5.18e-10 | 68 |
telencephalon | 7.35e-10 | 34 |
central nervous system | 1.79e-09 | 81 |
neural plate | 4.66e-09 | 82 |
presumptive neural plate | 4.66e-09 | 82 |
neurectoderm | 2.28e-08 | 86 |
pre-chordal neural plate | 3.54e-08 | 61 |
nervous system | 5.91e-08 | 89 |
testis | 1.28e-07 | 8 |
male reproductive organ | 1.34e-07 | 11 |