FFCP PHASE1:Hg19::chr19:51921149..51921168,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89790 | |EntrezGene=89790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15620 | |HGNC=15620 | ||
|TSSclassifier=strong | |||
|UniProt=F8W917,C9JJ33,B7ZL06,Q96LC7,C9JM10 | |UniProt=F8W917,C9JJ33,B7ZL06,Q96LC7,C9JM10 | ||
|association_with_transcript=-92bp_to_ENST00000353836,ENST00000432469,ENST00000442846,NM_001171156,NM_001171157,NM_001171158,NM_001171159,NM_001171160,NM_001171161,NM_033130_5end | |association_with_transcript=-92bp_to_ENST00000353836,ENST00000432469,ENST00000442846,NM_001171156,NM_001171157,NM_001171158,NM_001171159,NM_001171160,NM_001171161,NM_033130_5end | ||
|cluster_id=chr19:51921149..51921168,- | |||
|description=CAGE_peak_4_at_SIGLEC10_5end | |description=CAGE_peak_4_at_SIGLEC10_5end | ||
|id=chr19:51921149..51921168,- | |id=chr19:51921149..51921168,- | ||
|ontology_enrichment_celltype=CL:0000037!1.71e-46!172;CL:0000566!1.71e-46!172;CL:0002032!5.21e-44!165;CL:0000837!5.21e-44!165;CL:0000988!2.44e-42!182;CL:0000738!3.77e-41!140;CL:0002087!2.01e-35!119;CL:0002031!7.06e-33!124;CL:0000763!7.55e-32!112;CL:0000049!7.55e-32!112;CL:0000766!1.01e-28!76;CL:0002057!2.89e-27!42;CL:0000860!1.07e-24!45;CL:0000557!9.33e-24!71;CL:0000945!1.23e-23!24;CL:0000826!1.23e-23!24;CL:0000839!8.27e-23!70;CL:0002009!1.20e-22!65;CL:0002194!3.12e-22!63;CL:0000576!3.12e-22!63;CL:0000040!3.12e-22!63;CL:0000559!3.12e-22!63;CL:0000236!9.94e-21!14;CL:0000542!8.94e-11!53;CL:0000051!8.94e-11!53;CL:0000838!6.42e-10!52;CL:0002393!8.00e-09!9;CL:0002397!8.00e-09!9;CL:0000134!1.08e-08!358;CL:0002320!4.16e-08!365 | |ontology_enrichment_celltype=CL:0000037!1.71e-46!172;CL:0000566!1.71e-46!172;CL:0002032!5.21e-44!165;CL:0000837!5.21e-44!165;CL:0000988!2.44e-42!182;CL:0000738!3.77e-41!140;CL:0002087!2.01e-35!119;CL:0002031!7.06e-33!124;CL:0000763!7.55e-32!112;CL:0000049!7.55e-32!112;CL:0000766!1.01e-28!76;CL:0002057!2.89e-27!42;CL:0000860!1.07e-24!45;CL:0000557!9.33e-24!71;CL:0000945!1.23e-23!24;CL:0000826!1.23e-23!24;CL:0000839!8.27e-23!70;CL:0002009!1.20e-22!65;CL:0002194!3.12e-22!63;CL:0000576!3.12e-22!63;CL:0000040!3.12e-22!63;CL:0000559!3.12e-22!63;CL:0000236!9.94e-21!14;CL:0000542!8.94e-11!53;CL:0000051!8.94e-11!53;CL:0000838!6.42e-10!52;CL:0002393!8.00e-09!9;CL:0002397!8.00e-09!9;CL:0000134!1.08e-08!358;CL:0002320!4.16e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.75e-44;24!CL:0000236;2.88e-40;13!CL:0000542;8.48e-15;53!CL:0000771;9.59e-10;2!CL:0000738;3.17e-09;136!CL:0000094;7.21e-09;8!CL:0002087;7.06e-08;104!CL:0000988;1.01e-07;177!CL:0002393;9.00e-07;6!CL:0002397;9.00e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.54e-44,14;CL:0000945,3.43e-44,24;CL:0000826,3.43e-44,24;CL:0000037,4.81e-29,168;CL:0002032,9.47e-29,161;CL:0000837,9.47e-29,161;CL:0000988,3.71e-27,177;CL:0000738,5.61e-27,136;CL:0002087,6.76e-21,115;CL:0000542,1.76e-20,53;CL:0000051,1.76e-20,53;CL:0002031,1.24e-19,120;CL:0000838,2.54e-18,52;CL:0000763,9.00e-11,108;CL:0000049,9.00e-11,108;CL:0000771,1.25e-09,2;CL:0000134,1.76e-09,354;CL:0000766,1.86e-09,72;CL:0002320,3.86e-09,361;CL:0000094,7.46e-09,8;CL:0000219,6.19e-08,386;CL:0000034,3.15e-07,441;CL:0000775,9.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;8.48e-15;53 | |||
|ontology_enrichment_disease=DOID:2531!7.81e-07!51;DOID:0060083!7.81e-07!51 | |ontology_enrichment_disease=DOID:2531!7.81e-07!51;DOID:0060083!7.81e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:0060058;6.21e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.92e-07,10;DOID:2531,9.83e-07,51;DOID:0060083,9.83e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.02e-28!102;UBERON:0003061!2.02e-28!102;UBERON:0002193!7.22e-27!112;UBERON:0002371!1.05e-20!80;UBERON:0001474!2.57e-18!86;UBERON:0002405!1.87e-17!115;UBERON:0007023!1.63e-14!115;UBERON:0004765!1.87e-14!101;UBERON:0001434!1.87e-14!101;UBERON:0001893!3.51e-09!34;UBERON:0002780!8.79e-09!41;UBERON:0001890!8.79e-09!41;UBERON:0006240!8.79e-09!41;UBERON:0002791!1.57e-08!33;UBERON:0003080!1.91e-08!42;UBERON:0002020!5.75e-08!34;UBERON:0003528!5.75e-08!34;UBERON:0001049!1.12e-07!57;UBERON:0005068!1.12e-07!57;UBERON:0006241!1.12e-07!57;UBERON:0007135!1.12e-07!57;UBERON:0001869!1.15e-07!32;UBERON:0002384!2.53e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!2.02e-28!102;UBERON:0003061!2.02e-28!102;UBERON:0002193!7.22e-27!112;UBERON:0002371!1.05e-20!80;UBERON:0001474!2.57e-18!86;UBERON:0002405!1.87e-17!115;UBERON:0007023!1.63e-14!115;UBERON:0004765!1.87e-14!101;UBERON:0001434!1.87e-14!101;UBERON:0001893!3.51e-09!34;UBERON:0002780!8.79e-09!41;UBERON:0001890!8.79e-09!41;UBERON:0006240!8.79e-09!41;UBERON:0002791!1.57e-08!33;UBERON:0003080!1.91e-08!42;UBERON:0002020!5.75e-08!34;UBERON:0003528!5.75e-08!34;UBERON:0001049!1.12e-07!57;UBERON:0005068!1.12e-07!57;UBERON:0006241!1.12e-07!57;UBERON:0007135!1.12e-07!57;UBERON:0001869!1.15e-07!32;UBERON:0002384!2.53e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.13e-08,371;UBERON:0002390,2.68e-08,98;UBERON:0003061,2.68e-08,98;UBERON:0002193,2.79e-08,108;UBERON:0002106,9.28e-07,3;UBERON:0004854,9.28e-07,3;UBERON:0009034,9.28e-07,3;UBERON:0002095,9.28e-07,3;UBERON:0004782,9.28e-07,3;UBERON:0003281,9.28e-07,3;UBERON:0009664,9.28e-07,3;UBERON:0002296,9.28e-07,3;UBERON:0005602,9.28e-07,3;UBERON:0001179,9.28e-07,3;UBERON:0006293,9.28e-07,3 | |||
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| ||
|short_description=p4@SIGLEC10 | |short_description=p4@SIGLEC10 | ||
}} | }} |
Latest revision as of 14:53, 19 September 2015
Short description: | p4@SIGLEC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SIGLEC10_5end |
Coexpression cluster: | NA |
Association with transcript: | -92bp_to_ENST00000353836, ENST00000432469, ENST00000442846, NM_001171156, NM_001171157, NM_001171158, NM_001171159, NM_001171160, NM_001171161, NM_033130_5end |
EntrezGene: | SIGLEC10 |
HGNC: | 15620 |
UniProt: | F8W917C9JJ33B7ZL06Q96LC7C9JM10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.54e-44 | 14 |
lymphocyte of B lineage | 3.43e-44 | 24 |
pro-B cell | 3.43e-44 | 24 |
hematopoietic stem cell | 4.81e-29 | 168 |
hematopoietic oligopotent progenitor cell | 9.47e-29 | 161 |
hematopoietic multipotent progenitor cell | 9.47e-29 | 161 |
hematopoietic cell | 3.71e-27 | 177 |
leukocyte | 5.61e-27 | 136 |
nongranular leukocyte | 6.76e-21 | 115 |
lymphocyte | 1.76e-20 | 53 |
common lymphoid progenitor | 1.76e-20 | 53 |
hematopoietic lineage restricted progenitor cell | 1.24e-19 | 120 |
lymphoid lineage restricted progenitor cell | 2.54e-18 | 52 |
myeloid cell | 9.00e-11 | 108 |
common myeloid progenitor | 9.00e-11 | 108 |
eosinophil | 1.25e-09 | 2 |
mesenchymal cell | 1.76e-09 | 354 |
myeloid leukocyte | 1.86e-09 | 72 |
connective tissue cell | 3.86e-09 | 361 |
granulocyte | 7.46e-09 | 8 |
motile cell | 6.19e-08 | 386 |
stem cell | 3.15e-07 | 441 |
neutrophil | 9.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.13e-08 | 371 |
hematopoietic system | 2.68e-08 | 98 |
blood island | 2.68e-08 | 98 |
hemolymphoid system | 2.79e-08 | 108 |
spleen | 9.28e-07 | 3 |
gastrointestinal system mesentery | 9.28e-07 | 3 |
stomach region | 9.28e-07 | 3 |
mesentery | 9.28e-07 | 3 |
gastrointestinal system serosa | 9.28e-07 | 3 |
mesentery of stomach | 9.28e-07 | 3 |
gut mesentery | 9.28e-07 | 3 |
dorsal mesentery | 9.28e-07 | 3 |
dorsal mesogastrium | 9.28e-07 | 3 |
peritoneal cavity | 9.28e-07 | 3 |
spleen primordium | 9.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.92e-07 | 10 |
hematologic cancer | 9.83e-07 | 51 |
immune system cancer | 9.83e-07 | 51 |