FFCP PHASE1:Hg19::chr12:3068501..3068515,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:3068501..3068515,+
|short_description=p4@TEAD4
|description=CAGE_peak_4_at_TEAD4_5end
|association_with_transcript=5bp_to_ENST00000358409,uc010sej.1,uc010...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7004 | |EntrezGene=7004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11717 | |HGNC=11717 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000358409,uc010sej.1,uc010sek.1_5end | |||
|cluster_id=chr12:3068501..3068515,+ | |||
|description=CAGE_peak_4_at_TEAD4_5end | |||
|id=chr12:3068501..3068515,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.83e-34!254;CL:0002321!1.56e-20!248;CL:0000220!8.58e-20!246;CL:0000076!2.53e-11!62;CL:0002078!1.19e-10!44;CL:0000213!1.25e-10!57;CL:0000215!1.25e-10!57;CL:0000115!8.94e-10!35;CL:0000071!8.38e-09!18;CL:0002546!8.38e-09!18;CL:0002139!1.95e-08!24;CL:0000222!2.27e-07!119;CL:0000223!6.36e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.41e-10;36!CL:0000071;1.78e-09;18!CL:0002139;1.06e-08;24!CL:0002078;2.48e-08;45!CL:0000213;2.11e-07;58!CL:0000215;2.11e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.52e-29,253;CL:0002321,2.13e-16,250;CL:0002078,3.49e-13,45;CL:0000213,1.66e-12,58;CL:0000215,1.66e-12,58;CL:0000115,2.46e-12,36;CL:0000076,5.51e-12,63;CL:0000071,6.06e-10,18;CL:0002546,6.06e-10,18;CL:0002139,4.96e-09,24 | |||
|ontology_enrichment_development_v019=CL:0002546;1.78e-09;18 | |||
|ontology_enrichment_disease=DOID:0050687!2.76e-26!143;DOID:14566!4.82e-18!239;DOID:305!5.21e-18!106;DOID:162!6.18e-18!235;DOID:3095!4.47e-09!22;DOID:2994!4.47e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.30e-09;22!DOID:2994;1.30e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.84e-24,143;DOID:162,2.29e-18,235;DOID:14566,5.50e-18,239;DOID:305,3.38e-16,106;DOID:3095,7.55e-10,22;DOID:2994,7.55e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.39e-11!238;UBERON:0009142!2.39e-11!238;UBERON:0006914!1.91e-09!25;UBERON:0005177!3.63e-09!107;UBERON:0000487!8.30e-09!22;UBERON:0001986!8.38e-09!18;UBERON:0004638!8.38e-09!18;UBERON:0004852!8.38e-09!18;UBERON:0000464!1.46e-08!104;UBERON:0000466!1.54e-08!126;UBERON:0001007!5.02e-08!155;UBERON:0001555!5.02e-08!155;UBERON:0007026!5.02e-08!155;UBERON:0004119!5.33e-08!169;UBERON:0000925!5.33e-08!169;UBERON:0006595!5.33e-08!169;UBERON:0001041!8.64e-08!98;UBERON:0000119!9.97e-08!312;UBERON:0001048!1.31e-07!168;UBERON:0000481!1.50e-07!347;UBERON:0000483!2.04e-07!309;UBERON:0008947!2.49e-07!38;UBERON:0003258!2.49e-07!38;UBERON:0004921!4.21e-07!129;UBERON:0004185!4.21e-07!129;UBERON:0000077!5.69e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;2.91e-10;25!UBERON:0000487;1.42e-09;22!UBERON:0004638;1.78e-09;18!UBERON:0001986;1.78e-09;18!UBERON:0004852;1.78e-09;18!UBERON:0000490;3.80e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006914,9.38e-11,25;UBERON:0000487,6.03e-10,22;UBERON:0004638,6.06e-10,18;UBERON:0001986,6.06e-10,18;UBERON:0004852,6.06e-10,18;UBERON:0008947,1.22e-07,38;UBERON:0003258,1.22e-07,38;UBERON:0005177,4.06e-07,101 | |||
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| ||
|short_description=p4@TEAD4 | |||
}} | }} |
Latest revision as of 02:31, 18 September 2015
Short description: | p4@TEAD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TEAD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000358409, uc010sej.1, uc010sek.1_5end |
EntrezGene: | TEAD4 |
HGNC: | 11717 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.52e-29 | 253 |
embryonic cell | 2.13e-16 | 250 |
meso-epithelial cell | 3.49e-13 | 45 |
lining cell | 1.66e-12 | 58 |
barrier cell | 1.66e-12 | 58 |
endothelial cell | 2.46e-12 | 36 |
squamous epithelial cell | 5.51e-12 | 63 |
blood vessel endothelial cell | 6.06e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.06e-10 | 18 |
endothelial cell of vascular tree | 4.96e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
squamous epithelium | 9.38e-11 | 25 |
simple squamous epithelium | 6.03e-10 | 22 |
blood vessel endothelium | 6.06e-10 | 18 |
endothelium | 6.06e-10 | 18 |
cardiovascular system endothelium | 6.06e-10 | 18 |
respiratory primordium | 1.22e-07 | 38 |
endoderm of foregut | 1.22e-07 | 38 |
trunk region element | 4.06e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.84e-24 | 143 |
cancer | 2.29e-18 | 235 |
disease of cellular proliferation | 5.50e-18 | 239 |
carcinoma | 3.38e-16 | 106 |
germ cell and embryonal cancer | 7.55e-10 | 22 |
germ cell cancer | 7.55e-10 | 22 |