FFCP PHASE1:Hg19::chr3:49059786..49059806,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25915 | |EntrezGene=25915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29918 | |HGNC=29918 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=240bp_to_ENST00000496152_5end | |association_with_transcript=240bp_to_ENST00000496152_5end | ||
|cluster_id=chr3:49059786..49059806,+ | |||
|description=CAGE_peak_4_at_NDUFAF3_5end | |description=CAGE_peak_4_at_NDUFAF3_5end | ||
|id=chr3:49059786..49059806,+ | |id=chr3:49059786..49059806,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.33e-07,43;CL:0000514,7.33e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.01e-09,78;UBERON:0003077,5.04e-07,72;UBERON:0007285,5.04e-07,72;UBERON:0005256,7.86e-07,122;UBERON:0007524,8.05e-07,73;UBERON:0004872,9.10e-07,83;UBERON:0001134,9.50e-07,62;UBERON:0002036,9.50e-07,62;UBERON:0003082,9.50e-07,62 | |||
|phase1_expression=0.726713517082227,3.63970890614671,0.422863212287913,4.00293193412522,2.68176656656373,3.48935409640147,2.53299878168311,1.26343974685366,1.56711376919903,0.491467873003018,3.48900583986214,0.436882744260345,0.527533956456907,0.247532705920093,1.32558950291166,2.6893005858071,1.80808358407193,0.730310090387373,3.41552959153355,0.246242116153576,1.22400414746552,0.940364164434263,0,0.958120975510189,1.25542639594803,0.229240217243854,0.164201178899891,0,0,0,0.154816123316076,0,0.30120591877825,1.84877005083394,0.232401601740905,0.284338464974843,0.293600439334847,0,0,0.217010870715852,0.671746422719773,0.647787332037959,0.257575567634187,0.581592955118259,0,0.242584061187816,0.464858073811369,0,0,0,0.768482119587302,0,0.344745680736619,0,0,0.941211697713023,0.818718450173537,0.449446968890169,0.612167784741805,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0.870627715885752,0,1.86846674698672,0.75374599577023,0,0,0,0,0.316462387440884,0.633765858935825,0.425208599930087,0.419317291016752,0.898629049171961,0.300353785683013,0.32145117339416,0,0.99458338599545,0,1.75996244461323,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0.411202997999018,0.501559486172034,0.32592226663359,0,1.94826728407911,0.557052284425868,0.294605907474837,0,0.270803863765016,0.896639238079726,1.1705341280389,1.64437904603676,1.65810010671509,0.869409257205157,0.14828656316206,0.535081656179426,0,0.226618685395132,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.511946444617674,1.24930726552346,0.947109008176067,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0,0.869079113764942,0.795285947051099,1.45990461090791,0.472674085820339,0.886917589850256,0.351339142772504,0.72038491523742,0,0.370784442784429,0.649094787309367,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,2.20094433552054,1.04497483268405,0.516833518338658,0,0,0.805658634218294,0,1.22031028774085,0.367663080345869,0,0.446498641420399,0.22452937262617,0.675668882899933,0,0.949265659568129,1.09921046358244,0,0,1.3082821564276,0.496971951695318,1.77282716330412,0.264818361626438,0.286836620748814,1.77334191099179,1.12135520028461,3.20246987189115,1.97334038733728,0.311211035399766,0.942974704487816,0.653847612453835,0.302714855289863,0,0.234321431833797,0.624320153660641,0.570471821544449,1.04614076386261,1.05691048779388,0.809364721840658,0.561803226808994,0.408308342509787,1.59684612505298,0.619954687054593,0,1.7308685049499,0,1.43723628363248,0.336672227908132,0.875829639103749,0,0.877955241761676,1.5324389789951,0.901428353439581,0.340296549480063,0.717558542755448,0.427114777637135,0.847727604638247,0.600182192168805,0.412210116953756,0,0.744467425326359,0,0.389748020644795,1.26216887122057,0.0920498986422993,0.161646056818812,0.355009592516614,0.503760491138201,0.508681776931463,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.725627385107593,0.756962552626885,0,0,3.21620469096443,0,1.85747171212792,0.721879481669586,1.65629520055781,0.505754070234305,0.964044119533928,0.772057809126758,1.52515610864684,1.18635309555548,1.34831308160164,0.98110732562673,2.30848294167834,0.738155454624648,2.80483547606892,0.4115740113314,1.47008711385542,2.53510069643662,0.982827216677626,0.590789906681404,3.97316789473185,0.860919069801795,0.857839051492628,0.329250856225877,1.1240175325762,0.402115889646523,0.277765335475589,0,0,4.3299402607582,0.115930404975077,0,0.577465791044295,0,0.380508304469197,0.790204397959275,0,0,0,0.445893486866185,0.93733833986777,0.335964256397719,0.567100388969546,0.268675568108545,0.290633938513962,0,0,0.088048434013226,0.621984346622316,0.288239906833923,0.50496973370552,0.190493682876507,0.381988425558278,2.34434894420094,0,0.925447434329912,1.20137223137567,0.571652865261156,0.224262168690721,0,0.2933531432838,0.258543431515556,0,0,0,2.08014873822732,0.514414748524284,0,1.5985330740966,0.285955987316295,0.542621605391443,0,0,1.06617584622764,0.791951872933429,0,0.871533458600294,0.399891964728228,0,1.00451418286425,0,0.239624855491583,1.14861935834114,0,1.30303176000821,1.2328579353023,0,0.448340575974109,0,1.07813787429759,0.256686072559497,0,0,0.773288812777695,0.502548796003046,1.91381625495949,0.749007023947182,0,0,0.24538298343828,2.50085260529839,0.542530047399471,1.03985430765404,0.892144943985809,0.946214490203608,0.234282829985426,0,2.27407504055985,0,0.664225598535437,0.921845842708516,0.60818530127658,1.17480694477644,2.40200396667599,0,0.862856803274467,0.320182673410333,1.21251028578504,6.65741758041988,1.81434175997808,0.248107807818777,0.460385919864187,1.96462066103151,1.15325234330131,0,0.64341568457443,4.45254199334973,1.85051632563187,1.24293207719189,0.164254312027618,3.11552657510173,1.27831416305955,1.20859449591622,2.00506470303285,1.19705285616665,0.574072240823034,0.910455840033585,1.44236856455367,0,0,0,0,0.316654886678627,3.4120015221269,1.19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| ||
|short_description=p4@NDUFAF3 | |short_description=p4@NDUFAF3 | ||
}} | }} |
Latest revision as of 15:42, 18 September 2015
Short description: | p4@NDUFAF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NDUFAF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 240bp_to_ENST00000496152_5end |
EntrezGene: | NDUFAF3 |
HGNC: | 29918 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.33e-07 | 43 |
smooth muscle myoblast | 7.33e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 8.01e-09 | 78 |
paraxial mesoderm | 5.04e-07 | 72 |
presumptive paraxial mesoderm | 5.04e-07 | 72 |
trunk mesenchyme | 7.86e-07 | 122 |
dense mesenchyme tissue | 8.05e-07 | 73 |
splanchnic layer of lateral plate mesoderm | 9.10e-07 | 83 |
skeletal muscle tissue | 9.50e-07 | 62 |
striated muscle tissue | 9.50e-07 | 62 |
myotome | 9.50e-07 | 62 |