FFCP PHASE1:Hg19::chr1:153363539..153363557,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6279 | |EntrezGene=6279 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10498 | |HGNC=10498 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477801,uc001fbs.2_5end | |association_with_transcript=0bp_to_ENST00000477801,uc001fbs.2_5end | ||
|cluster_id=chr1:153363539..153363557,- | |||
|coexpression_cluster_id=C1837 | |||
|description=CAGE_peak_1_at_S100A8_5end | |description=CAGE_peak_1_at_S100A8_5end | ||
|id=chr1:153363539..153363557,- | |id=chr1:153363539..153363557,- | ||
|ontology_enrichment_celltype=CL:0000766!4.66e-31!76;CL:0000738!2.72e-29!140;CL:0002009!3.02e-29!65;CL:0002194!4.50e-29!63;CL:0000576!4.50e-29!63;CL:0000040!4.50e-29!63;CL:0000559!4.50e-29!63;CL:0002057!1.59e-28!42;CL:0000860!2.07e-26!45;CL:0002087!7.37e-26!119;CL:0000037!1.65e-25!172;CL:0000566!1.65e-25!172;CL:0000839!3.99e-25!70;CL:0000557!9.67e-25!71;CL:0000763!8.17e-24!112;CL:0000049!8.17e-24!112;CL:0002032!1.69e-23!165;CL:0000837!1.69e-23!165;CL:0002031!5.65e-23!124;CL:0000988!2.33e-21!182;CL:0000094!1.86e-07!8 | |ontology_enrichment_celltype=CL:0000766!4.66e-31!76;CL:0000738!2.72e-29!140;CL:0002009!3.02e-29!65;CL:0002194!4.50e-29!63;CL:0000576!4.50e-29!63;CL:0000040!4.50e-29!63;CL:0000559!4.50e-29!63;CL:0002057!1.59e-28!42;CL:0000860!2.07e-26!45;CL:0002087!7.37e-26!119;CL:0000037!1.65e-25!172;CL:0000566!1.65e-25!172;CL:0000839!3.99e-25!70;CL:0000557!9.67e-25!71;CL:0000763!8.17e-24!112;CL:0000049!8.17e-24!112;CL:0002032!1.69e-23!165;CL:0000837!1.69e-23!165;CL:0002031!5.65e-23!124;CL:0000988!2.33e-21!182;CL:0000094!1.86e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.84e-23;33!CL:0002057;1.84e-23;33!CL:0000473;6.65e-22;39!CL:0000234;6.65e-22;39!CL:0000576;2.85e-21;48!CL:0000766;6.05e-16;69!CL:0002087;4.24e-09;104!CL:0000763;6.27e-09;100!CL:0000094;4.09e-08;8!CL:0000738;1.31e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.60e-37,72;CL:0002009,2.22e-35,61;CL:0002194,2.94e-35,59;CL:0000576,2.94e-35,59;CL:0000040,2.94e-35,59;CL:0000559,2.94e-35,59;CL:0000473,4.17e-34,48;CL:0000234,4.17e-34,48;CL:0000738,5.39e-32,136;CL:0000860,1.55e-31,42;CL:0002057,1.55e-31,42;CL:0000557,9.81e-30,67;CL:0000839,1.98e-29,66;CL:0002087,2.57e-29,115;CL:0000037,1.85e-27,168;CL:0000763,1.88e-26,108;CL:0000049,1.88e-26,108;CL:0002031,2.59e-25,120;CL:0002032,3.59e-25,161;CL:0000837,3.59e-25,161;CL:0000988,7.08e-24,177;CL:0000094,4.09e-08,8;CL:0002393,3.99e-07,9;CL:0002397,3.99e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.78e-23;42!CL:0000049;3.28e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.00e-29!115;UBERON:0002390!4.60e-26!102;UBERON:0003061!4.60e-26!102;UBERON:0002193!5.29e-23!112;UBERON:0002371!1.94e-19!80;UBERON:0001474!3.98e-16!86;UBERON:0002405!6.39e-14!115;UBERON:0004765!8.91e-14!101;UBERON:0001434!8.91e-14!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.43e-07;15!UBERON:0000179;1.43e-07;15!UBERON:0000463;1.43e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.59e-31,98;UBERON:0003061,2.59e-31,98;UBERON:0002193,1.16e-27,108;UBERON:0007023,4.76e-26,114;UBERON:0002371,6.01e-24,76;UBERON:0002405,2.53e-21,93;UBERON:0001474,2.55e-20,82;UBERON:0004765,3.69e-19,90;UBERON:0001434,9.50e-16,100;UBERON:0003081,1.30e-07,203;UBERON:0000178,1.42e-07,15;UBERON:0000179,1.42e-07,15;UBERON:0000463,1.42e-07,15;UBERON:0002050,9.14e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,5.3786011716142,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,3122.5256296266,1817.8160293884,1385.44948755556,1185.13395835334,135.843869368991,499.167913725163,0,0,15.2672228454121,3151.67987913785,1750.15139307193,1598.71908456368,259.741950118312,118.868975428965,259.893747742894,1872.14772252568,717.20854112136,990.228137768666,2514.18489220879,753.259570855985,1399.25338370408,3563.35797130216,1556.17629216429,3277.4072240259,2792.78475964735,729.397692449724,1384.05869299417,1935.6959775166,771.232780063472,2144.53621205944,3230.40940008251,1193.21412266892,1437.86919592204,3057.39170143067,1290.72932846958,1652.04713306472,3604.10853452838,1177.32434123412,1507.85266481829,2943.629362148,1440.3358206766,2766.11712616437,3284.29230178603,1928.30170203089,3265.89183838993,784.39087807624,975.42852823962,1809.7734280283,5513.42620256342,6984.42693227278,4045.6237427522,185.543296175553,151.375591348508,223.215595900383,1.75996244461323,83.013068911844,24.9062591081795,267.986579771767,26.0257391573408,57.4752439954483,80.6474744797532,41.0243114450207,22.7685187643779,91.6090015418664,25.6123062843903,76.659370575835,394.03751977602,36.3470036989606,3.93419540227666,1.17903228824749,12.5416914389701,0,0.32592226663359,0,0,0,2.94605907474837,0,1.62482318259009,0,0,0,0,0,1.18629250529648,0.802622484269139,1.04535523804977,0,2.29932296161153,3.09264700934367,2.53019692019503,43.6434617624013,13.6727525309848,4.75226022224187,260.645531123625,101.621369256608,159.911329987003,165.270521926724,58.3000877813943,1.20964045934839,0.802320587350522,1.01377082717959,0,0,0,0,0,0,0,0.486634870302636,0,0,4.0404001418838,34.4474968558984,1570.47698782915,1048.94918863715,9.41187441598582,8.18409765306556,7.44564578905645,219.888355609525,179.03440707418,59.4332002127304,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0.549605231791222,4248.60065813868,9159.36983918344,1747.86496098728,0,0,0.132409180813219,0,31.2108176334554,0.560677600142307,0,2.22000793575444,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1297.55336813837,2176.51404231486,473.801191582634,0.365921118388786,0,0,0.207322110030741,0,0,1.56449532329816,0,0,0,0,0.354920400119532,0,0,0.55146986366197,0,0,2.02246962240247,0.392442930250692,0,0,0,0,0,12.6755034821831,126.784710951414,18.9052770138049,0,0.122988438543114,0,234.865610774459,428.25067991153,49.9628992885805,83.4221890878352,0,0,0,0.231860809950154,0,0,0,0,0,0.858486162094873,304.078002517936,230.026192631871,1055.57851457455,835.168460822183,40.4836928959251,1252.15765884476,68.6913869130846,240.354267151047,11.8848630541215,0,0,0.207328115540772,0,0,0.825472625798197,0,0,41.0573870454493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.162378064119,63.7866506118801,147.583757638122,0,0,0,0,0,0,0.112085143993527,108.760979631464,6.253199670926,96.2572772098113,0.254094624222463,0,0,9.54842712405788,0,8277.27662164031,5262.2500673988,10618.1542852581,0,0,0,0,0,0,0,0,0,5.17365356462525,0,0.368738337083406,0,0,0,1143.01364840732,1107.6924212036,568.964610650162,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,47.9210464024851,46.5008994126276,0,0,0.262248829918848,0,0,0,0,0,0,0,1.51141141271498,0,0,0,0,0,0,0.438519753291869,1.3071772551245,0,0,0,133.850274130391,0,0,1111.20381602259,737.818379251452,0,0,0,0,0,0,0,2.13066568540252,0,669.569192127322,109.16395826338,126.464198082133,559.908317035469,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.632233916389,0,0,0,0,0,2.11107635297664,0,0,0,362.949809200631,209.134309967166,418.141381867479,140.462550758955,118.819482857259,1032.73014584254,475.800554744853,36.0665738324926,5003.43342702919,6757.86363672431,3231.60849283902,2160.28573985123,4061.37972218,7123.479323452,6538.70064207909,2847.31938289643,0,0,6.37104561550682,0,0,0,0,0.399158742865633,143.437522229143,1.05836791361941,0,0,0,87.2707019455739,5.01268954180134,0,165.084541206603,31.4807543218034,627.697354355541,300.91068200605,15.3620382154229,19.907173602425,14.1821770455122,45.3300381332733,0,0,0,0,0,0,24.6133741176782,0,6.90948982520366,0,1.67121139316383,40.0902319124062,1.22864280839693,25.8478388419237,9.14351206668333,0,269.454334360752,0,15.5413430835834,0.828851746593443,0,0,0,0,0,0.358042349351218,1.02314474045374,25.5486420599658,3280.91836515308,0,0.969332746095218,25.5112269945091,9.98068990005971,0,0.262379999988587,6.52499617891314,8.87588896626897,0,62.8791233502711,0,0,0,48.7157762197611,10.4918901604105,3.05163472634166,5.52896299656123,4.43321428430321,0.87754158861589,0,753.724761570129,1554.16437100119,0.91153644677601,0,0,0,14.6740533476683,0.274792780205587,23.9865649208386,0,6.90713128138109,0,0,0,0,0,0.476809736941136,0,0,0,0,0.995261931078505,35.736856059349,23.2191455074778,0,0,0,6.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| ||
|short_description=p1@S100A8 | |short_description=p1@S100A8 | ||
}} | }} |
Latest revision as of 05:18, 17 September 2015
Short description: | p1@S100A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_S100A8_5end |
Coexpression cluster: | C1837_Neutrophils_Eosinophils_tongue_CD14_esophagus_Whole_blood |
Association with transcript: | 0bp_to_ENST00000477801, uc001fbs.2_5end |
EntrezGene: | S100A8 |
HGNC: | 10498 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.60e-37 | 72 |
macrophage dendritic cell progenitor | 2.22e-35 | 61 |
monopoietic cell | 2.94e-35 | 59 |
monocyte | 2.94e-35 | 59 |
monoblast | 2.94e-35 | 59 |
promonocyte | 2.94e-35 | 59 |
defensive cell | 4.17e-34 | 48 |
phagocyte | 4.17e-34 | 48 |
leukocyte | 5.39e-32 | 136 |
classical monocyte | 1.55e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.55e-31 | 42 |
granulocyte monocyte progenitor cell | 9.81e-30 | 67 |
myeloid lineage restricted progenitor cell | 1.98e-29 | 66 |
nongranular leukocyte | 2.57e-29 | 115 |
hematopoietic stem cell | 1.85e-27 | 168 |
myeloid cell | 1.88e-26 | 108 |
common myeloid progenitor | 1.88e-26 | 108 |
hematopoietic lineage restricted progenitor cell | 2.59e-25 | 120 |
hematopoietic oligopotent progenitor cell | 3.59e-25 | 161 |
hematopoietic multipotent progenitor cell | 3.59e-25 | 161 |
hematopoietic cell | 7.08e-24 | 177 |
granulocyte | 4.09e-08 | 8 |
intermediate monocyte | 3.99e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.99e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.59e-31 | 98 |
blood island | 2.59e-31 | 98 |
hemolymphoid system | 1.16e-27 | 108 |
adult organism | 4.76e-26 | 114 |
bone marrow | 6.01e-24 | 76 |
immune system | 2.53e-21 | 93 |
bone element | 2.55e-20 | 82 |
skeletal element | 3.69e-19 | 90 |
skeletal system | 9.50e-16 | 100 |
lateral plate mesoderm | 1.30e-07 | 203 |
blood | 1.42e-07 | 15 |
haemolymphatic fluid | 1.42e-07 | 15 |
organism substance | 1.42e-07 | 15 |
embryonic structure | 9.14e-07 | 564 |